Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:02608:02644
Extra
PDB:
ATOM 1 O3' A A2607 55.137 140.964 149.507 1.00100.17 O
ATOM 2 P C A2608 54.898 139.401 149.800 1.00105.63 P
ATOM 3 OP1 C A2608 56.208 138.830 150.222 1.00106.10 O
ATOM 4 OP2 C A2608 54.175 138.798 148.644 1.00105.13 O
ATOM 5 O5' C A2608 53.916 139.423 151.059 1.00105.56 O
ATOM 6 C5' C A2608 54.267 140.167 152.241 1.00104.62 C
ATOM 7 C4' C A2608 53.037 140.502 153.058 1.00104.87 C
ATOM 8 O4' C A2608 52.148 141.403 152.341 1.00104.06 O
ATOM 9 C3' C A2608 52.092 139.371 153.402 1.00104.58 C
ATOM 10 O3' C A2608 52.593 138.487 154.391 1.00104.07 O
ATOM 11 C2' C A2608 50.882 140.151 153.901 1.00104.56 C
ATOM 12 O2' C A2608 51.042 140.670 155.211 1.00104.30 O
ATOM 13 C1' C A2608 50.838 141.300 152.894 1.00103.59 C
ATOM 14 N1 C A2608 49.853 141.008 151.831 1.00102.35 N
ATOM 15 C2 C A2608 48.520 141.421 152.022 1.00101.77 C
ATOM 16 O2 C A2608 48.223 142.063 153.044 1.00101.63 O
ATOM 17 N3 C A2608 47.592 141.111 151.090 1.00101.10 N
ATOM 18 C4 C A2608 47.942 140.429 150.001 1.00101.25 C
ATOM 19 N4 C A2608 46.983 140.132 149.121 1.00101.26 N
ATOM 20 C5 C A2608 49.291 140.018 149.767 1.00101.37 C
ATOM 21 C6 C A2608 50.206 140.328 150.697 1.00101.71 C
ATOM 22 P G A2609 52.038 136.982 154.447 1.00103.18 P
ATOM 23 OP1 G A2609 52.649 136.319 155.628 1.00103.88 O
ATOM 24 OP2 G A2609 52.209 136.383 153.098 1.00103.40 O
ATOM 25 O5' G A2609 50.476 137.163 154.708 1.00100.43 O
TER
ATOM 1 O3' C B2643 38.995 137.695 143.714 1.00 62.00 O
ATOM 2 P A B2644 39.473 139.156 143.247 1.00 63.28 P
ATOM 3 OP1 A B2644 38.270 140.025 143.294 1.00 64.38 O
ATOM 4 OP2 A B2644 40.244 139.033 141.986 1.00 64.34 O
ATOM 5 O5' A B2644 40.490 139.626 144.379 1.00 62.20 O
ATOM 6 C5' A B2644 40.028 140.062 145.669 1.00 59.90 C
ATOM 7 C4' A B2644 41.198 140.540 146.484 1.00 59.09 C
ATOM 8 O4' A B2644 42.122 139.439 146.637 1.00 59.42 O
ATOM 9 C3' A B2644 42.005 141.646 145.820 1.00 58.79 C
ATOM 10 O3' A B2644 41.467 142.921 146.171 1.00 56.50 O
ATOM 11 C2' A B2644 43.401 141.434 146.395 1.00 60.41 C
ATOM 12 O2' A B2644 43.596 142.017 147.666 1.00 61.18 O
ATOM 13 C1' A B2644 43.450 139.909 146.528 1.00 61.40 C
ATOM 14 N9 A B2644 44.066 139.245 145.383 1.00 64.27 N
ATOM 15 C8 A B2644 43.501 138.976 144.159 1.00 64.99 C
ATOM 16 N7 A B2644 44.313 138.382 143.321 1.00 66.05 N
ATOM 17 C5 A B2644 45.491 138.243 144.043 1.00 66.74 C
ATOM 18 C6 A B2644 46.738 137.689 143.716 1.00 67.35 C
ATOM 19 N6 A B2644 47.013 137.153 142.523 1.00 68.36 N
ATOM 20 N1 A B2644 47.704 137.703 144.665 1.00 67.02 N
ATOM 21 C2 A B2644 47.421 138.243 145.859 1.00 65.58 C
ATOM 22 N3 A B2644 46.287 138.796 146.286 1.00 65.51 N
ATOM 23 C4 A B2644 45.351 138.765 145.318 1.00 65.86 C
ATOM 24 P C B2645 40.928 143.917 145.031 1.00 54.10 P
ATOM 25 OP1 C B2645 40.306 145.057 145.749 1.00 53.66 O
ATOM 26 OP2 C B2645 40.133 143.160 144.026 1.00 53.58 O
ATOM 27 O5' C B2645 42.256 144.447 144.339 1.00 51.56 O
TER
ATOM 2 P C A2608 54.898 139.401 149.800 1.00105.63 P
ATOM 3 OP1 C A2608 56.208 138.830 150.222 1.00106.10 O
ATOM 4 OP2 C A2608 54.175 138.798 148.644 1.00105.13 O
ATOM 5 O5' C A2608 53.916 139.423 151.059 1.00105.56 O
ATOM 6 C5' C A2608 54.267 140.167 152.241 1.00104.62 C
ATOM 7 C4' C A2608 53.037 140.502 153.058 1.00104.87 C
ATOM 8 O4' C A2608 52.148 141.403 152.341 1.00104.06 O
ATOM 9 C3' C A2608 52.092 139.371 153.402 1.00104.58 C
ATOM 10 O3' C A2608 52.593 138.487 154.391 1.00104.07 O
ATOM 11 C2' C A2608 50.882 140.151 153.901 1.00104.56 C
ATOM 12 O2' C A2608 51.042 140.670 155.211 1.00104.30 O
ATOM 13 C1' C A2608 50.838 141.300 152.894 1.00103.59 C
ATOM 14 N1 C A2608 49.853 141.008 151.831 1.00102.35 N
ATOM 15 C2 C A2608 48.520 141.421 152.022 1.00101.77 C
ATOM 16 O2 C A2608 48.223 142.063 153.044 1.00101.63 O
ATOM 17 N3 C A2608 47.592 141.111 151.090 1.00101.10 N
ATOM 18 C4 C A2608 47.942 140.429 150.001 1.00101.25 C
ATOM 19 N4 C A2608 46.983 140.132 149.121 1.00101.26 N
ATOM 20 C5 C A2608 49.291 140.018 149.767 1.00101.37 C
ATOM 21 C6 C A2608 50.206 140.328 150.697 1.00101.71 C
ATOM 22 P G A2609 52.038 136.982 154.447 1.00103.18 P
ATOM 23 OP1 G A2609 52.649 136.319 155.628 1.00103.88 O
ATOM 24 OP2 G A2609 52.209 136.383 153.098 1.00103.40 O
ATOM 25 O5' G A2609 50.476 137.163 154.708 1.00100.43 O
TER
ATOM 1 O3' C B2643 38.995 137.695 143.714 1.00 62.00 O
ATOM 2 P A B2644 39.473 139.156 143.247 1.00 63.28 P
ATOM 3 OP1 A B2644 38.270 140.025 143.294 1.00 64.38 O
ATOM 4 OP2 A B2644 40.244 139.033 141.986 1.00 64.34 O
ATOM 5 O5' A B2644 40.490 139.626 144.379 1.00 62.20 O
ATOM 6 C5' A B2644 40.028 140.062 145.669 1.00 59.90 C
ATOM 7 C4' A B2644 41.198 140.540 146.484 1.00 59.09 C
ATOM 8 O4' A B2644 42.122 139.439 146.637 1.00 59.42 O
ATOM 9 C3' A B2644 42.005 141.646 145.820 1.00 58.79 C
ATOM 10 O3' A B2644 41.467 142.921 146.171 1.00 56.50 O
ATOM 11 C2' A B2644 43.401 141.434 146.395 1.00 60.41 C
ATOM 12 O2' A B2644 43.596 142.017 147.666 1.00 61.18 O
ATOM 13 C1' A B2644 43.450 139.909 146.528 1.00 61.40 C
ATOM 14 N9 A B2644 44.066 139.245 145.383 1.00 64.27 N
ATOM 15 C8 A B2644 43.501 138.976 144.159 1.00 64.99 C
ATOM 16 N7 A B2644 44.313 138.382 143.321 1.00 66.05 N
ATOM 17 C5 A B2644 45.491 138.243 144.043 1.00 66.74 C
ATOM 18 C6 A B2644 46.738 137.689 143.716 1.00 67.35 C
ATOM 19 N6 A B2644 47.013 137.153 142.523 1.00 68.36 N
ATOM 20 N1 A B2644 47.704 137.703 144.665 1.00 67.02 N
ATOM 21 C2 A B2644 47.421 138.243 145.859 1.00 65.58 C
ATOM 22 N3 A B2644 46.287 138.796 146.286 1.00 65.51 N
ATOM 23 C4 A B2644 45.351 138.765 145.318 1.00 65.86 C
ATOM 24 P C B2645 40.928 143.917 145.031 1.00 54.10 P
ATOM 25 OP1 C B2645 40.306 145.057 145.749 1.00 53.66 O
ATOM 26 OP2 C B2645 40.133 143.160 144.026 1.00 53.58 O
ATOM 27 O5' C B2645 42.256 144.447 144.339 1.00 51.56 O
TER
Atoms:
C2: (48.520,141.421,152.022)
OP1: (56.208,138.830,150.222)
OP2: (54.175,138.798,148.644)
C4: (47.942,140.429,150.001)
O5': (53.916,139.423,151.059)
C3': (52.092,139.371,153.402)
C1': (50.838,141.300,152.894)
O4': (52.148,141.403,152.341)
C5': (54.267,140.167,152.241)
P: (54.898,139.401,149.800)
O2: (48.223,142.063,153.044)
C4': (53.037,140.502,153.058)
C2': (50.882,140.151,153.901)
O2': (51.042,140.670,155.211)
N1: (49.853,141.008,151.831)
N3: (47.592,141.111,151.090)
N4: (46.983,140.132,149.121)
C6: (50.206,140.328,150.697)
C5: (49.291,140.018,149.767)
O3': (52.593,138.487,154.391)
OP1: (56.208,138.830,150.222)
OP2: (54.175,138.798,148.644)
C4: (47.942,140.429,150.001)
O5': (53.916,139.423,151.059)
C3': (52.092,139.371,153.402)
C1': (50.838,141.300,152.894)
O4': (52.148,141.403,152.341)
C5': (54.267,140.167,152.241)
P: (54.898,139.401,149.800)
O2: (48.223,142.063,153.044)
C4': (53.037,140.502,153.058)
C2': (50.882,140.151,153.901)
O2': (51.042,140.670,155.211)
N1: (49.853,141.008,151.831)
N3: (47.592,141.111,151.090)
N4: (46.983,140.132,149.121)
C6: (50.206,140.328,150.697)
C5: (49.291,140.018,149.767)
O3': (52.593,138.487,154.391)
OP1: (38.270,140.025,143.294)
OP2: (40.244,139.033,141.986)
C3': (42.005,141.646,145.820)
C1': (43.450,139.909,146.528)
C5': (40.028,140.062,145.669)
O4': (42.122,139.439,146.637)
C8: (43.501,138.976,144.159)
O2': (43.596,142.017,147.666)
C6: (46.738,137.689,143.716)
C5: (45.491,138.243,144.043)
C4: (45.351,138.765,145.318)
P: (39.473,139.156,143.247)
C4': (41.198,140.540,146.484)
C2': (43.401,141.434,146.395)
C2: (47.421,138.243,145.859)
N1: (47.704,137.703,144.665)
N3: (46.287,138.796,146.286)
N6: (47.013,137.153,142.523)
N7: (44.313,138.382,143.321)
N9: (44.066,139.245,145.383)
O5': (40.490,139.626,144.379)
O3': (41.467,142.921,146.171)
OP2: (40.244,139.033,141.986)
C3': (42.005,141.646,145.820)
C1': (43.450,139.909,146.528)
C5': (40.028,140.062,145.669)
O4': (42.122,139.439,146.637)
C8: (43.501,138.976,144.159)
O2': (43.596,142.017,147.666)
C6: (46.738,137.689,143.716)
C5: (45.491,138.243,144.043)
C4: (45.351,138.765,145.318)
P: (39.473,139.156,143.247)
C4': (41.198,140.540,146.484)
C2': (43.401,141.434,146.395)
C2: (47.421,138.243,145.859)
N1: (47.704,137.703,144.665)
N3: (46.287,138.796,146.286)
N6: (47.013,137.153,142.523)
N7: (44.313,138.382,143.321)
N9: (44.066,139.245,145.383)
O5': (40.490,139.626,144.379)
O3': (41.467,142.921,146.171)
Image (generated by PyMOL):