Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0161:0162
Extra
PDB:
ATOM 1 O3' U A 160 68.325 103.137 52.829 1.00 27.31 O
ATOM 2 P C A 161 68.316 104.264 51.687 1.00 28.66 P
ATOM 3 OP1 C A 161 67.206 103.963 50.752 1.00 28.56 O
ATOM 4 OP2 C A 161 69.695 104.401 51.161 1.00 25.94 O
ATOM 5 O5' C A 161 67.934 105.583 52.487 1.00 28.06 O
ATOM 6 C5' C A 161 66.732 105.643 53.273 1.00 24.93 C
ATOM 7 C4' C A 161 66.764 106.843 54.190 1.00 26.25 C
ATOM 8 O4' C A 161 67.760 106.663 55.227 1.00 27.39 O
ATOM 9 C3' C A 161 67.156 108.160 53.546 1.00 26.94 C
ATOM 10 O3' C A 161 66.045 108.741 52.915 1.00 27.33 O
ATOM 11 C2' C A 161 67.597 108.986 54.742 1.00 26.84 C
ATOM 12 O2' C A 161 66.485 109.493 55.448 1.00 28.19 O
ATOM 13 C1' C A 161 68.301 107.924 55.588 1.00 25.32 C
ATOM 14 N1 C A 161 69.759 107.875 55.396 1.00 24.32 N
ATOM 15 C2 C A 161 70.574 108.563 56.299 1.00 25.12 C
ATOM 16 O2 C A 161 70.036 109.227 57.202 1.00 24.35 O
ATOM 17 N3 C A 161 71.925 108.490 56.163 1.00 22.92 N
ATOM 18 C4 C A 161 72.455 107.770 55.170 1.00 24.34 C
ATOM 19 N4 C A 161 73.779 107.686 55.095 1.00 23.06 N
ATOM 20 C5 C A 161 71.645 107.089 54.217 1.00 24.30 C
ATOM 21 C6 C A 161 70.316 107.165 54.367 1.00 24.79 C
ATOM 22 P A A 162 66.258 109.681 51.642 1.00 29.49 P
ATOM 23 OP1 A A 162 67.224 110.748 51.985 1.00 29.95 O
ATOM 24 OP2 A A 162 64.885 110.033 51.172 1.00 25.81 O
ATOM 25 O5' A A 162 66.967 108.748 50.570 1.00 30.32 O
TER
ATOM 1 O3' C B 161 66.045 108.741 52.915 1.00 27.33 O
ATOM 2 P A B 162 66.258 109.681 51.642 1.00 29.49 P
ATOM 3 OP1 A B 162 67.224 110.748 51.985 1.00 29.95 O
ATOM 4 OP2 A B 162 64.885 110.033 51.172 1.00 25.81 O
ATOM 5 O5' A B 162 66.967 108.748 50.570 1.00 30.32 O
ATOM 6 C5' A B 162 67.097 109.173 49.206 1.00 27.21 C
ATOM 7 C4' A B 162 68.506 108.948 48.736 1.00 30.07 C
ATOM 8 O4' A B 162 69.394 109.824 49.494 1.00 30.90 O
ATOM 9 C3' A B 162 69.036 107.529 48.956 1.00 30.89 C
ATOM 10 O3' A B 162 69.986 107.245 47.940 1.00 33.15 O
ATOM 11 C2' A B 162 69.842 107.692 50.238 1.00 30.19 C
ATOM 12 O2' A B 162 70.839 106.707 50.380 1.00 32.62 O
ATOM 13 C1' A B 162 70.474 109.058 49.976 1.00 30.05 C
ATOM 14 N9 A B 162 71.083 109.719 51.129 1.00 28.44 N
ATOM 15 C8 A B 162 70.480 110.408 52.148 1.00 29.89 C
ATOM 16 N7 A B 162 71.308 110.788 53.091 1.00 29.44 N
ATOM 17 C5 A B 162 72.543 110.338 52.648 1.00 28.89 C
ATOM 18 C6 A B 162 73.831 110.407 53.208 1.00 28.79 C
ATOM 19 N6 A B 162 74.096 110.965 54.395 1.00 28.16 N
ATOM 20 N1 A B 162 74.850 109.871 52.504 1.00 26.59 N
ATOM 21 C2 A B 162 74.583 109.311 51.321 1.00 29.09 C
ATOM 22 N3 A B 162 73.414 109.178 50.693 1.00 29.26 N
ATOM 23 C4 A B 162 72.423 109.711 51.424 1.00 28.32 C
ATOM 24 P G B 163 69.613 106.280 46.715 1.00 34.48 P
ATOM 25 OP1 G B 163 68.306 106.733 46.183 1.00 29.09 O
ATOM 26 OP2 G B 163 69.803 104.859 47.118 1.00 30.77 O
ATOM 27 O5' G B 163 70.769 106.618 45.671 1.00 33.99 O
TER
ATOM 2 P C A 161 68.316 104.264 51.687 1.00 28.66 P
ATOM 3 OP1 C A 161 67.206 103.963 50.752 1.00 28.56 O
ATOM 4 OP2 C A 161 69.695 104.401 51.161 1.00 25.94 O
ATOM 5 O5' C A 161 67.934 105.583 52.487 1.00 28.06 O
ATOM 6 C5' C A 161 66.732 105.643 53.273 1.00 24.93 C
ATOM 7 C4' C A 161 66.764 106.843 54.190 1.00 26.25 C
ATOM 8 O4' C A 161 67.760 106.663 55.227 1.00 27.39 O
ATOM 9 C3' C A 161 67.156 108.160 53.546 1.00 26.94 C
ATOM 10 O3' C A 161 66.045 108.741 52.915 1.00 27.33 O
ATOM 11 C2' C A 161 67.597 108.986 54.742 1.00 26.84 C
ATOM 12 O2' C A 161 66.485 109.493 55.448 1.00 28.19 O
ATOM 13 C1' C A 161 68.301 107.924 55.588 1.00 25.32 C
ATOM 14 N1 C A 161 69.759 107.875 55.396 1.00 24.32 N
ATOM 15 C2 C A 161 70.574 108.563 56.299 1.00 25.12 C
ATOM 16 O2 C A 161 70.036 109.227 57.202 1.00 24.35 O
ATOM 17 N3 C A 161 71.925 108.490 56.163 1.00 22.92 N
ATOM 18 C4 C A 161 72.455 107.770 55.170 1.00 24.34 C
ATOM 19 N4 C A 161 73.779 107.686 55.095 1.00 23.06 N
ATOM 20 C5 C A 161 71.645 107.089 54.217 1.00 24.30 C
ATOM 21 C6 C A 161 70.316 107.165 54.367 1.00 24.79 C
ATOM 22 P A A 162 66.258 109.681 51.642 1.00 29.49 P
ATOM 23 OP1 A A 162 67.224 110.748 51.985 1.00 29.95 O
ATOM 24 OP2 A A 162 64.885 110.033 51.172 1.00 25.81 O
ATOM 25 O5' A A 162 66.967 108.748 50.570 1.00 30.32 O
TER
ATOM 1 O3' C B 161 66.045 108.741 52.915 1.00 27.33 O
ATOM 2 P A B 162 66.258 109.681 51.642 1.00 29.49 P
ATOM 3 OP1 A B 162 67.224 110.748 51.985 1.00 29.95 O
ATOM 4 OP2 A B 162 64.885 110.033 51.172 1.00 25.81 O
ATOM 5 O5' A B 162 66.967 108.748 50.570 1.00 30.32 O
ATOM 6 C5' A B 162 67.097 109.173 49.206 1.00 27.21 C
ATOM 7 C4' A B 162 68.506 108.948 48.736 1.00 30.07 C
ATOM 8 O4' A B 162 69.394 109.824 49.494 1.00 30.90 O
ATOM 9 C3' A B 162 69.036 107.529 48.956 1.00 30.89 C
ATOM 10 O3' A B 162 69.986 107.245 47.940 1.00 33.15 O
ATOM 11 C2' A B 162 69.842 107.692 50.238 1.00 30.19 C
ATOM 12 O2' A B 162 70.839 106.707 50.380 1.00 32.62 O
ATOM 13 C1' A B 162 70.474 109.058 49.976 1.00 30.05 C
ATOM 14 N9 A B 162 71.083 109.719 51.129 1.00 28.44 N
ATOM 15 C8 A B 162 70.480 110.408 52.148 1.00 29.89 C
ATOM 16 N7 A B 162 71.308 110.788 53.091 1.00 29.44 N
ATOM 17 C5 A B 162 72.543 110.338 52.648 1.00 28.89 C
ATOM 18 C6 A B 162 73.831 110.407 53.208 1.00 28.79 C
ATOM 19 N6 A B 162 74.096 110.965 54.395 1.00 28.16 N
ATOM 20 N1 A B 162 74.850 109.871 52.504 1.00 26.59 N
ATOM 21 C2 A B 162 74.583 109.311 51.321 1.00 29.09 C
ATOM 22 N3 A B 162 73.414 109.178 50.693 1.00 29.26 N
ATOM 23 C4 A B 162 72.423 109.711 51.424 1.00 28.32 C
ATOM 24 P G B 163 69.613 106.280 46.715 1.00 34.48 P
ATOM 25 OP1 G B 163 68.306 106.733 46.183 1.00 29.09 O
ATOM 26 OP2 G B 163 69.803 104.859 47.118 1.00 30.77 O
ATOM 27 O5' G B 163 70.769 106.618 45.671 1.00 33.99 O
TER
Atoms:
C2: (70.574,108.563,56.299)
OP1: (67.206,103.963,50.752)
OP2: (69.695,104.401,51.161)
C4: (72.455,107.770,55.170)
O5': (67.934,105.583,52.487)
C3': (67.156,108.160,53.546)
C1': (68.301,107.924,55.588)
O4': (67.760,106.663,55.227)
C5': (66.732,105.643,53.273)
P: (68.316,104.264,51.687)
O2: (70.036,109.227,57.202)
C4': (66.764,106.843,54.190)
C2': (67.597,108.986,54.742)
O2': (66.485,109.493,55.448)
N1: (69.759,107.875,55.396)
N3: (71.925,108.490,56.163)
N4: (73.779,107.686,55.095)
C6: (70.316,107.165,54.367)
C5: (71.645,107.089,54.217)
O3': (66.045,108.741,52.915)
OP1: (67.206,103.963,50.752)
OP2: (69.695,104.401,51.161)
C4: (72.455,107.770,55.170)
O5': (67.934,105.583,52.487)
C3': (67.156,108.160,53.546)
C1': (68.301,107.924,55.588)
O4': (67.760,106.663,55.227)
C5': (66.732,105.643,53.273)
P: (68.316,104.264,51.687)
O2: (70.036,109.227,57.202)
C4': (66.764,106.843,54.190)
C2': (67.597,108.986,54.742)
O2': (66.485,109.493,55.448)
N1: (69.759,107.875,55.396)
N3: (71.925,108.490,56.163)
N4: (73.779,107.686,55.095)
C6: (70.316,107.165,54.367)
C5: (71.645,107.089,54.217)
O3': (66.045,108.741,52.915)
OP1: (67.224,110.748,51.985)
OP2: (64.885,110.033,51.172)
C3': (69.036,107.529,48.956)
C1': (70.474,109.058,49.976)
C5': (67.097,109.173,49.206)
O4': (69.394,109.824,49.494)
C8: (70.480,110.408,52.148)
O2': (70.839,106.707,50.380)
C6: (73.831,110.407,53.208)
C5: (72.543,110.338,52.648)
C4: (72.423,109.711,51.424)
P: (66.258,109.681,51.642)
C4': (68.506,108.948,48.736)
C2': (69.842,107.692,50.238)
C2: (74.583,109.311,51.321)
N1: (74.850,109.871,52.504)
N3: (73.414,109.178,50.693)
N6: (74.096,110.965,54.395)
N7: (71.308,110.788,53.091)
N9: (71.083,109.719,51.129)
O5': (66.967,108.748,50.570)
O3': (69.986,107.245,47.940)
OP2: (64.885,110.033,51.172)
C3': (69.036,107.529,48.956)
C1': (70.474,109.058,49.976)
C5': (67.097,109.173,49.206)
O4': (69.394,109.824,49.494)
C8: (70.480,110.408,52.148)
O2': (70.839,106.707,50.380)
C6: (73.831,110.407,53.208)
C5: (72.543,110.338,52.648)
C4: (72.423,109.711,51.424)
P: (66.258,109.681,51.642)
C4': (68.506,108.948,48.736)
C2': (69.842,107.692,50.238)
C2: (74.583,109.311,51.321)
N1: (74.850,109.871,52.504)
N3: (73.414,109.178,50.693)
N6: (74.096,110.965,54.395)
N7: (71.308,110.788,53.091)
N9: (71.083,109.719,51.129)
O5': (66.967,108.748,50.570)
O3': (69.986,107.245,47.940)
Image (generated by PyMOL):