Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:075:076
Extra
PDB:
ATOM 1 O3' G A 74 39.956 155.722 37.172 1.00 55.44 O
ATOM 2 P C A 75 39.236 156.035 38.571 1.00 59.07 P
ATOM 3 OP1 C A 75 37.828 155.585 38.471 1.00 59.83 O
ATOM 4 OP2 C A 75 39.525 157.437 38.945 1.00 59.28 O
ATOM 5 O5' C A 75 39.972 155.070 39.598 1.00 60.97 O
ATOM 6 C5' C A 75 39.902 153.641 39.439 1.00 63.15 C
ATOM 7 C4' C A 75 40.625 152.948 40.569 1.00 64.66 C
ATOM 8 O4' C A 75 42.050 153.201 40.483 1.00 64.15 O
ATOM 9 C3' C A 75 40.241 153.395 41.967 1.00 65.28 C
ATOM 10 O3' C A 75 39.060 152.722 42.383 1.00 68.59 O
ATOM 11 C2' C A 75 41.463 152.990 42.781 1.00 64.40 C
ATOM 12 O2' C A 75 41.475 151.618 43.105 1.00 65.00 O
ATOM 13 C1' C A 75 42.595 153.267 41.789 1.00 64.29 C
ATOM 14 N1 C A 75 43.248 154.578 41.964 1.00 65.40 N
ATOM 15 C2 C A 75 44.260 154.700 42.924 1.00 66.21 C
ATOM 16 O2 C A 75 44.565 153.706 43.612 1.00 67.54 O
ATOM 17 N3 C A 75 44.879 155.895 43.080 1.00 65.08 N
ATOM 18 C4 C A 75 44.526 156.935 42.325 1.00 63.64 C
ATOM 19 N4 C A 75 45.174 158.084 42.504 1.00 63.25 N
ATOM 20 C5 C A 75 43.495 156.840 41.350 1.00 64.08 C
ATOM 21 C6 C A 75 42.887 155.657 41.204 1.00 64.72 C
ATOM 22 P A A 76 38.031 153.442 43.384 1.00 70.61 P
ATOM 23 OP1 A A 76 38.506 153.193 44.766 1.00 71.18 O
ATOM 24 OP2 A A 76 36.673 153.012 42.992 1.00 72.32 O
ATOM 25 O5' A A 76 38.157 154.998 43.067 1.00 71.65 O
TER
ATOM 1 O3' C B 75 39.060 152.722 42.383 1.00 68.59 O
ATOM 2 P A B 76 38.031 153.442 43.384 1.00 70.61 P
ATOM 3 OP1 A B 76 38.506 153.193 44.766 1.00 71.18 O
ATOM 4 OP2 A B 76 36.673 153.012 42.992 1.00 72.32 O
ATOM 5 O5' A B 76 38.157 154.998 43.067 1.00 71.65 O
ATOM 6 C5' A B 76 37.165 155.930 43.546 1.00 72.44 C
ATOM 7 C4' A B 76 37.679 157.346 43.434 1.00 73.08 C
ATOM 8 O4' A B 76 38.743 157.551 44.401 1.00 73.09 O
ATOM 9 C3' A B 76 38.268 157.729 42.077 1.00 74.17 C
ATOM 10 O3' A B 76 38.089 159.126 41.870 1.00 77.58 O
ATOM 11 C2' A B 76 39.752 157.482 42.295 1.00 73.08 C
ATOM 12 O2' A B 76 40.565 158.228 41.419 1.00 72.09 O
ATOM 13 C1' A B 76 39.905 157.984 43.727 1.00 73.53 C
ATOM 14 N9 A B 76 41.082 157.504 44.447 1.00 73.38 N
ATOM 15 C8 A B 76 41.374 156.236 44.881 1.00 73.16 C
ATOM 16 N7 A B 76 42.517 156.147 45.517 1.00 73.35 N
ATOM 17 C5 A B 76 43.011 157.443 45.497 1.00 73.74 C
ATOM 18 C6 A B 76 44.186 158.018 46.011 1.00 74.20 C
ATOM 19 N6 A B 76 45.117 157.338 46.686 1.00 74.13 N
ATOM 20 N1 A B 76 44.374 159.339 45.808 1.00 74.54 N
ATOM 21 C2 A B 76 43.439 160.026 45.141 1.00 74.10 C
ATOM 22 N3 A B 76 42.295 159.602 44.621 1.00 73.06 N
ATOM 23 C4 A B 76 42.139 158.286 44.835 1.00 73.19 C
ATOM 24 P C B 77 36.915 159.658 40.913 1.00 80.25 P
ATOM 25 OP1 C B 77 36.225 158.504 40.278 1.00 80.16 O
ATOM 26 OP2 C B 77 37.498 160.728 40.054 1.00 77.81 O
ATOM 27 O5' C B 77 35.889 160.327 41.931 1.00 81.47 O
TER
ATOM 2 P C A 75 39.236 156.035 38.571 1.00 59.07 P
ATOM 3 OP1 C A 75 37.828 155.585 38.471 1.00 59.83 O
ATOM 4 OP2 C A 75 39.525 157.437 38.945 1.00 59.28 O
ATOM 5 O5' C A 75 39.972 155.070 39.598 1.00 60.97 O
ATOM 6 C5' C A 75 39.902 153.641 39.439 1.00 63.15 C
ATOM 7 C4' C A 75 40.625 152.948 40.569 1.00 64.66 C
ATOM 8 O4' C A 75 42.050 153.201 40.483 1.00 64.15 O
ATOM 9 C3' C A 75 40.241 153.395 41.967 1.00 65.28 C
ATOM 10 O3' C A 75 39.060 152.722 42.383 1.00 68.59 O
ATOM 11 C2' C A 75 41.463 152.990 42.781 1.00 64.40 C
ATOM 12 O2' C A 75 41.475 151.618 43.105 1.00 65.00 O
ATOM 13 C1' C A 75 42.595 153.267 41.789 1.00 64.29 C
ATOM 14 N1 C A 75 43.248 154.578 41.964 1.00 65.40 N
ATOM 15 C2 C A 75 44.260 154.700 42.924 1.00 66.21 C
ATOM 16 O2 C A 75 44.565 153.706 43.612 1.00 67.54 O
ATOM 17 N3 C A 75 44.879 155.895 43.080 1.00 65.08 N
ATOM 18 C4 C A 75 44.526 156.935 42.325 1.00 63.64 C
ATOM 19 N4 C A 75 45.174 158.084 42.504 1.00 63.25 N
ATOM 20 C5 C A 75 43.495 156.840 41.350 1.00 64.08 C
ATOM 21 C6 C A 75 42.887 155.657 41.204 1.00 64.72 C
ATOM 22 P A A 76 38.031 153.442 43.384 1.00 70.61 P
ATOM 23 OP1 A A 76 38.506 153.193 44.766 1.00 71.18 O
ATOM 24 OP2 A A 76 36.673 153.012 42.992 1.00 72.32 O
ATOM 25 O5' A A 76 38.157 154.998 43.067 1.00 71.65 O
TER
ATOM 1 O3' C B 75 39.060 152.722 42.383 1.00 68.59 O
ATOM 2 P A B 76 38.031 153.442 43.384 1.00 70.61 P
ATOM 3 OP1 A B 76 38.506 153.193 44.766 1.00 71.18 O
ATOM 4 OP2 A B 76 36.673 153.012 42.992 1.00 72.32 O
ATOM 5 O5' A B 76 38.157 154.998 43.067 1.00 71.65 O
ATOM 6 C5' A B 76 37.165 155.930 43.546 1.00 72.44 C
ATOM 7 C4' A B 76 37.679 157.346 43.434 1.00 73.08 C
ATOM 8 O4' A B 76 38.743 157.551 44.401 1.00 73.09 O
ATOM 9 C3' A B 76 38.268 157.729 42.077 1.00 74.17 C
ATOM 10 O3' A B 76 38.089 159.126 41.870 1.00 77.58 O
ATOM 11 C2' A B 76 39.752 157.482 42.295 1.00 73.08 C
ATOM 12 O2' A B 76 40.565 158.228 41.419 1.00 72.09 O
ATOM 13 C1' A B 76 39.905 157.984 43.727 1.00 73.53 C
ATOM 14 N9 A B 76 41.082 157.504 44.447 1.00 73.38 N
ATOM 15 C8 A B 76 41.374 156.236 44.881 1.00 73.16 C
ATOM 16 N7 A B 76 42.517 156.147 45.517 1.00 73.35 N
ATOM 17 C5 A B 76 43.011 157.443 45.497 1.00 73.74 C
ATOM 18 C6 A B 76 44.186 158.018 46.011 1.00 74.20 C
ATOM 19 N6 A B 76 45.117 157.338 46.686 1.00 74.13 N
ATOM 20 N1 A B 76 44.374 159.339 45.808 1.00 74.54 N
ATOM 21 C2 A B 76 43.439 160.026 45.141 1.00 74.10 C
ATOM 22 N3 A B 76 42.295 159.602 44.621 1.00 73.06 N
ATOM 23 C4 A B 76 42.139 158.286 44.835 1.00 73.19 C
ATOM 24 P C B 77 36.915 159.658 40.913 1.00 80.25 P
ATOM 25 OP1 C B 77 36.225 158.504 40.278 1.00 80.16 O
ATOM 26 OP2 C B 77 37.498 160.728 40.054 1.00 77.81 O
ATOM 27 O5' C B 77 35.889 160.327 41.931 1.00 81.47 O
TER
Atoms:
C2: (44.260,154.700,42.924)
OP1: (37.828,155.585,38.471)
OP2: (39.525,157.437,38.945)
C4: (44.526,156.935,42.325)
O5': (39.972,155.070,39.598)
C3': (40.241,153.395,41.967)
C1': (42.595,153.267,41.789)
O4': (42.050,153.201,40.483)
C5': (39.902,153.641,39.439)
P: (39.236,156.035,38.571)
O2: (44.565,153.706,43.612)
C4': (40.625,152.948,40.569)
C2': (41.463,152.990,42.781)
O2': (41.475,151.618,43.105)
N1: (43.248,154.578,41.964)
N3: (44.879,155.895,43.080)
N4: (45.174,158.084,42.504)
C6: (42.887,155.657,41.204)
C5: (43.495,156.840,41.350)
O3': (39.060,152.722,42.383)
OP1: (37.828,155.585,38.471)
OP2: (39.525,157.437,38.945)
C4: (44.526,156.935,42.325)
O5': (39.972,155.070,39.598)
C3': (40.241,153.395,41.967)
C1': (42.595,153.267,41.789)
O4': (42.050,153.201,40.483)
C5': (39.902,153.641,39.439)
P: (39.236,156.035,38.571)
O2: (44.565,153.706,43.612)
C4': (40.625,152.948,40.569)
C2': (41.463,152.990,42.781)
O2': (41.475,151.618,43.105)
N1: (43.248,154.578,41.964)
N3: (44.879,155.895,43.080)
N4: (45.174,158.084,42.504)
C6: (42.887,155.657,41.204)
C5: (43.495,156.840,41.350)
O3': (39.060,152.722,42.383)
OP1: (38.506,153.193,44.766)
OP2: (36.673,153.012,42.992)
C3': (38.268,157.729,42.077)
C1': (39.905,157.984,43.727)
C5': (37.165,155.930,43.546)
O4': (38.743,157.551,44.401)
C8: (41.374,156.236,44.881)
O2': (40.565,158.228,41.419)
C6: (44.186,158.018,46.011)
C5: (43.011,157.443,45.497)
C4: (42.139,158.286,44.835)
P: (38.031,153.442,43.384)
C4': (37.679,157.346,43.434)
C2': (39.752,157.482,42.295)
C2: (43.439,160.026,45.141)
N1: (44.374,159.339,45.808)
N3: (42.295,159.602,44.621)
N6: (45.117,157.338,46.686)
N7: (42.517,156.147,45.517)
N9: (41.082,157.504,44.447)
O5': (38.157,154.998,43.067)
O3': (38.089,159.126,41.870)
OP2: (36.673,153.012,42.992)
C3': (38.268,157.729,42.077)
C1': (39.905,157.984,43.727)
C5': (37.165,155.930,43.546)
O4': (38.743,157.551,44.401)
C8: (41.374,156.236,44.881)
O2': (40.565,158.228,41.419)
C6: (44.186,158.018,46.011)
C5: (43.011,157.443,45.497)
C4: (42.139,158.286,44.835)
P: (38.031,153.442,43.384)
C4': (37.679,157.346,43.434)
C2': (39.752,157.482,42.295)
C2: (43.439,160.026,45.141)
N1: (44.374,159.339,45.808)
N3: (42.295,159.602,44.621)
N6: (45.117,157.338,46.686)
N7: (42.517,156.147,45.517)
N9: (41.082,157.504,44.447)
O5': (38.157,154.998,43.067)
O3': (38.089,159.126,41.870)
Image (generated by PyMOL):