ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3Q3Z:A61:A62

Extra

PDB:
ATOM 1 O3' G A 60 -3.812 20.622 -21.971 1.00 53.57 O
ATOM 2 P C A 61 -3.206 20.859 -23.423 1.00 55.73 P
ATOM 3 OP1 C A 61 -4.194 21.659 -24.180 1.00 55.70 O
ATOM 4 OP2 C A 61 -2.748 19.560 -23.963 1.00 52.12 O
ATOM 5 O5' C A 61 -1.920 21.764 -23.108 1.00 56.84 O
ATOM 6 C5' C A 61 -2.106 23.130 -22.754 1.00 59.54 C
ATOM 7 C4' C A 61 -0.814 23.774 -22.292 1.00 59.76 C
ATOM 8 O4' C A 61 -0.223 23.006 -21.219 1.00 60.57 O
ATOM 9 C3' C A 61 0.281 23.836 -23.337 1.00 60.42 C
ATOM 10 O3' C A 61 0.077 24.928 -24.214 1.00 57.07 O
ATOM 11 C2' C A 61 1.531 24.000 -22.480 1.00 61.16 C
ATOM 12 O2' C A 61 1.792 25.344 -22.129 1.00 63.10 O
ATOM 13 C1' C A 61 1.189 23.151 -21.256 1.00 61.76 C
ATOM 14 N1 C A 61 1.840 21.792 -21.291 1.00 58.04 N
ATOM 15 C2 C A 61 3.142 21.629 -20.790 1.00 63.92 C
ATOM 16 O2 C A 61 3.743 22.603 -20.318 1.00 62.92 O
ATOM 17 N3 C A 61 3.719 20.395 -20.831 1.00 64.21 N
ATOM 18 C4 C A 61 3.055 19.355 -21.347 1.00 59.74 C
ATOM 19 N4 C A 61 3.662 18.162 -21.363 1.00 58.76 N
ATOM 20 C5 C A 61 1.734 19.500 -21.866 1.00 60.08 C
ATOM 21 C6 C A 61 1.175 20.719 -21.821 1.00 58.87 C
ATOM 22 P A A 62 -0.158 24.743 -25.789 1.00 63.27 P
ATOM 23 OP1 A A 62 0.904 25.518 -26.474 1.00 67.55 O
ATOM 24 OP2 A A 62 -1.585 25.040 -26.042 1.00 60.13 O
ATOM 25 O5' A A 62 0.096 23.199 -26.119 1.00 57.01 O
TER

ATOM 1 O3' C B 61 0.077 24.928 -24.214 1.00 57.07 O
ATOM 2 P A B 62 -0.158 24.743 -25.789 1.00 63.27 P
ATOM 3 OP1 A B 62 0.904 25.518 -26.474 1.00 67.55 O
ATOM 4 OP2 A B 62 -1.585 25.040 -26.042 1.00 60.13 O
ATOM 5 O5' A B 62 0.096 23.199 -26.119 1.00 57.01 O
ATOM 6 C5' A B 62 -0.386 22.659 -27.358 1.00 56.88 C
ATOM 7 C4' A B 62 -0.051 21.182 -27.500 1.00 53.32 C
ATOM 8 O4' A B 62 1.359 20.992 -27.232 1.00 52.30 O
ATOM 9 C3' A B 62 -0.776 20.261 -26.523 1.00 51.72 C
ATOM 10 O3' A B 62 -0.999 18.964 -27.074 1.00 52.51 O
ATOM 11 C2' A B 62 0.201 20.205 -25.357 1.00 50.74 C
ATOM 12 O2' A B 62 0.010 19.068 -24.539 1.00 48.51 O
ATOM 13 C1' A B 62 1.527 20.154 -26.109 1.00 48.23 C
ATOM 14 N9 A B 62 2.696 20.613 -25.365 1.00 47.34 N
ATOM 15 C8 A B 62 3.030 21.900 -25.053 1.00 55.07 C
ATOM 16 N7 A B 62 4.156 22.012 -24.382 1.00 54.96 N
ATOM 17 C5 A B 62 4.597 20.709 -24.252 1.00 46.13 C
ATOM 18 C6 A B 62 5.735 20.145 -23.643 1.00 47.69 C
ATOM 19 N6 A B 62 6.673 20.865 -23.020 1.00 45.61 N
ATOM 20 N1 A B 62 5.877 18.797 -23.691 1.00 52.65 N
ATOM 21 C2 A B 62 4.939 18.071 -24.313 1.00 47.79 C
ATOM 22 N3 A B 62 3.830 18.492 -24.923 1.00 48.18 N
ATOM 23 C4 A B 62 3.712 19.832 -24.856 1.00 51.82 C
ATOM 24 P A B 63 -2.038 18.717 -28.268 1.00 49.92 P
ATOM 25 OP1 A B 63 -2.923 19.902 -28.372 1.00 56.75 O
ATOM 26 OP2 A B 63 -2.605 17.356 -28.109 1.00 48.36 O
ATOM 27 O5' A B 63 -1.103 18.688 -29.555 1.00 55.71 O
TER

Atoms:
C2: (3.142,21.629,-20.790)
OP1: (-4.194,21.659,-24.180)
OP2: (-2.748,19.560,-23.963)
C4: (3.055,19.355,-21.347)
O5': (-1.920,21.764,-23.108)
C3': (0.281,23.836,-23.337)
C1': (1.189,23.151,-21.256)
O4': (-0.223,23.006,-21.219)
C5': (-2.106,23.130,-22.754)
P: (-3.206,20.859,-23.423)
O2: (3.743,22.603,-20.318)
C4': (-0.814,23.774,-22.292)
C2': (1.531,24.000,-22.480)
O2': (1.792,25.344,-22.129)
N1: (1.840,21.792,-21.291)
N3: (3.719,20.395,-20.831)
N4: (3.662,18.162,-21.363)
C6: (1.175,20.719,-21.821)
C5: (1.734,19.500,-21.866)
O3': (0.077,24.928,-24.214)
OP1: (0.904,25.518,-26.474)
OP2: (-1.585,25.040,-26.042)
C3': (-0.776,20.261,-26.523)
C1': (1.527,20.154,-26.109)
C5': (-0.386,22.659,-27.358)
O4': (1.359,20.992,-27.232)
C8: (3.030,21.900,-25.053)
O2': (0.010,19.068,-24.539)
C6: (5.735,20.145,-23.643)
C5: (4.597,20.709,-24.252)
C4: (3.712,19.832,-24.856)
P: (-0.158,24.743,-25.789)
C4': (-0.051,21.182,-27.500)
C2': (0.201,20.205,-25.357)
C2: (4.939,18.071,-24.313)
N1: (5.877,18.797,-23.691)
N3: (3.830,18.492,-24.923)
N6: (6.673,20.865,-23.020)
N7: (4.156,22.012,-24.382)
N9: (2.696,20.613,-25.365)
O5': (0.096,23.199,-26.119)
O3': (-0.999,18.964,-27.074)
Image (generated by PyMOL):
PyMOL image
show in jmol