Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01188:01189
Extra
PDB:
ATOM 1 O3' C A1187 50.808 104.664 141.618 1.00 40.71 O
ATOM 2 P C A1188 51.480 105.275 140.304 1.00 43.52 P
ATOM 3 OP1 C A1188 52.323 106.424 140.721 1.00 40.55 O
ATOM 4 OP2 C A1188 50.411 105.476 139.296 1.00 42.16 O
ATOM 5 O5' C A1188 52.437 104.104 139.810 1.00 42.47 O
ATOM 6 C5' C A1188 53.645 103.795 140.521 1.00 41.08 C
ATOM 7 C4' C A1188 54.334 102.624 139.876 1.00 40.97 C
ATOM 8 O4' C A1188 53.460 101.474 139.943 1.00 39.66 O
ATOM 9 C3' C A1188 54.630 102.785 138.396 1.00 40.67 C
ATOM 10 O3' C A1188 55.844 103.485 138.185 1.00 41.20 O
ATOM 11 C2' C A1188 54.703 101.344 137.925 1.00 40.78 C
ATOM 12 O2' C A1188 55.931 100.734 138.250 1.00 42.08 O
ATOM 13 C1' C A1188 53.592 100.710 138.761 1.00 40.60 C
ATOM 14 N1 C A1188 52.288 100.697 138.086 1.00 41.49 N
ATOM 15 C2 C A1188 51.895 99.543 137.413 1.00 43.48 C
ATOM 16 O2 C A1188 52.684 98.592 137.342 1.00 47.64 O
ATOM 17 N3 C A1188 50.677 99.491 136.845 1.00 43.71 N
ATOM 18 C4 C A1188 49.868 100.545 136.911 1.00 44.76 C
ATOM 19 N4 C A1188 48.657 100.433 136.360 1.00 46.66 N
ATOM 20 C5 C A1188 50.258 101.756 137.553 1.00 44.85 C
ATOM 21 C6 C A1188 51.465 101.786 138.125 1.00 42.11 C
ATOM 22 P A A1189 56.163 104.108 136.743 1.00 45.51 P
ATOM 23 OP1 A A1189 55.992 103.027 135.736 1.00 43.90 O
ATOM 24 OP2 A A1189 57.458 104.824 136.847 1.00 42.61 O
ATOM 25 O5' A A1189 55.025 105.196 136.498 1.00 43.06 O
TER
ATOM 1 O3' C B1188 55.844 103.485 138.185 1.00 41.20 O
ATOM 2 P A B1189 56.163 104.108 136.743 1.00 45.51 P
ATOM 3 OP1 A B1189 55.992 103.027 135.736 1.00 43.90 O
ATOM 4 OP2 A B1189 57.458 104.824 136.847 1.00 42.61 O
ATOM 5 O5' A B1189 55.025 105.196 136.498 1.00 43.06 O
ATOM 6 C5' A B1189 55.240 106.273 135.569 1.00 43.47 C
ATOM 7 C4' A B1189 53.920 106.809 135.063 1.00 44.92 C
ATOM 8 O4' A B1189 53.278 105.795 134.251 1.00 46.30 O
ATOM 9 C3' A B1189 52.896 107.224 136.114 1.00 43.65 C
ATOM 10 O3' A B1189 52.122 108.309 135.598 1.00 42.63 O
ATOM 11 C2' A B1189 52.039 105.965 136.246 1.00 43.73 C
ATOM 12 O2' A B1189 50.715 106.230 136.653 1.00 45.16 O
ATOM 13 C1' A B1189 52.025 105.454 134.809 1.00 43.95 C
ATOM 14 N9 A B1189 51.885 104.012 134.680 1.00 42.90 N
ATOM 15 C8 A B1189 52.857 103.080 134.915 1.00 46.30 C
ATOM 16 N7 A B1189 52.498 101.857 134.623 1.00 48.47 N
ATOM 17 C5 A B1189 51.194 101.992 134.182 1.00 45.96 C
ATOM 18 C6 A B1189 50.275 101.066 133.691 1.00 46.53 C
ATOM 19 N6 A B1189 50.543 99.765 133.556 1.00 47.27 N
ATOM 20 N1 A B1189 49.058 101.521 133.329 1.00 46.25 N
ATOM 21 C2 A B1189 48.804 102.823 133.456 1.00 44.90 C
ATOM 22 N3 A B1189 49.595 103.797 133.897 1.00 45.38 N
ATOM 23 C4 A B1189 50.792 103.310 134.244 1.00 44.50 C
ATOM 24 P A B1190 52.518 109.829 135.965 1.00 44.79 P
ATOM 25 OP1 A B1190 52.904 109.933 137.390 1.00 44.68 O
ATOM 26 OP2 A B1190 51.421 110.674 135.454 1.00 46.17 O
ATOM 27 O5' A B1190 53.821 110.120 135.092 1.00 44.54 O
TER
ATOM 2 P C A1188 51.480 105.275 140.304 1.00 43.52 P
ATOM 3 OP1 C A1188 52.323 106.424 140.721 1.00 40.55 O
ATOM 4 OP2 C A1188 50.411 105.476 139.296 1.00 42.16 O
ATOM 5 O5' C A1188 52.437 104.104 139.810 1.00 42.47 O
ATOM 6 C5' C A1188 53.645 103.795 140.521 1.00 41.08 C
ATOM 7 C4' C A1188 54.334 102.624 139.876 1.00 40.97 C
ATOM 8 O4' C A1188 53.460 101.474 139.943 1.00 39.66 O
ATOM 9 C3' C A1188 54.630 102.785 138.396 1.00 40.67 C
ATOM 10 O3' C A1188 55.844 103.485 138.185 1.00 41.20 O
ATOM 11 C2' C A1188 54.703 101.344 137.925 1.00 40.78 C
ATOM 12 O2' C A1188 55.931 100.734 138.250 1.00 42.08 O
ATOM 13 C1' C A1188 53.592 100.710 138.761 1.00 40.60 C
ATOM 14 N1 C A1188 52.288 100.697 138.086 1.00 41.49 N
ATOM 15 C2 C A1188 51.895 99.543 137.413 1.00 43.48 C
ATOM 16 O2 C A1188 52.684 98.592 137.342 1.00 47.64 O
ATOM 17 N3 C A1188 50.677 99.491 136.845 1.00 43.71 N
ATOM 18 C4 C A1188 49.868 100.545 136.911 1.00 44.76 C
ATOM 19 N4 C A1188 48.657 100.433 136.360 1.00 46.66 N
ATOM 20 C5 C A1188 50.258 101.756 137.553 1.00 44.85 C
ATOM 21 C6 C A1188 51.465 101.786 138.125 1.00 42.11 C
ATOM 22 P A A1189 56.163 104.108 136.743 1.00 45.51 P
ATOM 23 OP1 A A1189 55.992 103.027 135.736 1.00 43.90 O
ATOM 24 OP2 A A1189 57.458 104.824 136.847 1.00 42.61 O
ATOM 25 O5' A A1189 55.025 105.196 136.498 1.00 43.06 O
TER
ATOM 1 O3' C B1188 55.844 103.485 138.185 1.00 41.20 O
ATOM 2 P A B1189 56.163 104.108 136.743 1.00 45.51 P
ATOM 3 OP1 A B1189 55.992 103.027 135.736 1.00 43.90 O
ATOM 4 OP2 A B1189 57.458 104.824 136.847 1.00 42.61 O
ATOM 5 O5' A B1189 55.025 105.196 136.498 1.00 43.06 O
ATOM 6 C5' A B1189 55.240 106.273 135.569 1.00 43.47 C
ATOM 7 C4' A B1189 53.920 106.809 135.063 1.00 44.92 C
ATOM 8 O4' A B1189 53.278 105.795 134.251 1.00 46.30 O
ATOM 9 C3' A B1189 52.896 107.224 136.114 1.00 43.65 C
ATOM 10 O3' A B1189 52.122 108.309 135.598 1.00 42.63 O
ATOM 11 C2' A B1189 52.039 105.965 136.246 1.00 43.73 C
ATOM 12 O2' A B1189 50.715 106.230 136.653 1.00 45.16 O
ATOM 13 C1' A B1189 52.025 105.454 134.809 1.00 43.95 C
ATOM 14 N9 A B1189 51.885 104.012 134.680 1.00 42.90 N
ATOM 15 C8 A B1189 52.857 103.080 134.915 1.00 46.30 C
ATOM 16 N7 A B1189 52.498 101.857 134.623 1.00 48.47 N
ATOM 17 C5 A B1189 51.194 101.992 134.182 1.00 45.96 C
ATOM 18 C6 A B1189 50.275 101.066 133.691 1.00 46.53 C
ATOM 19 N6 A B1189 50.543 99.765 133.556 1.00 47.27 N
ATOM 20 N1 A B1189 49.058 101.521 133.329 1.00 46.25 N
ATOM 21 C2 A B1189 48.804 102.823 133.456 1.00 44.90 C
ATOM 22 N3 A B1189 49.595 103.797 133.897 1.00 45.38 N
ATOM 23 C4 A B1189 50.792 103.310 134.244 1.00 44.50 C
ATOM 24 P A B1190 52.518 109.829 135.965 1.00 44.79 P
ATOM 25 OP1 A B1190 52.904 109.933 137.390 1.00 44.68 O
ATOM 26 OP2 A B1190 51.421 110.674 135.454 1.00 46.17 O
ATOM 27 O5' A B1190 53.821 110.120 135.092 1.00 44.54 O
TER
Atoms:
C2: (51.895,99.543,137.413)
OP1: (52.323,106.424,140.721)
OP2: (50.411,105.476,139.296)
C4: (49.868,100.545,136.911)
O5': (52.437,104.104,139.810)
C3': (54.630,102.785,138.396)
C1': (53.592,100.710,138.761)
O4': (53.460,101.474,139.943)
C5': (53.645,103.795,140.521)
P: (51.480,105.275,140.304)
O2: (52.684,98.592,137.342)
C4': (54.334,102.624,139.876)
C2': (54.703,101.344,137.925)
O2': (55.931,100.734,138.250)
N1: (52.288,100.697,138.086)
N3: (50.677,99.491,136.845)
N4: (48.657,100.433,136.360)
C6: (51.465,101.786,138.125)
C5: (50.258,101.756,137.553)
O3': (55.844,103.485,138.185)
OP1: (52.323,106.424,140.721)
OP2: (50.411,105.476,139.296)
C4: (49.868,100.545,136.911)
O5': (52.437,104.104,139.810)
C3': (54.630,102.785,138.396)
C1': (53.592,100.710,138.761)
O4': (53.460,101.474,139.943)
C5': (53.645,103.795,140.521)
P: (51.480,105.275,140.304)
O2: (52.684,98.592,137.342)
C4': (54.334,102.624,139.876)
C2': (54.703,101.344,137.925)
O2': (55.931,100.734,138.250)
N1: (52.288,100.697,138.086)
N3: (50.677,99.491,136.845)
N4: (48.657,100.433,136.360)
C6: (51.465,101.786,138.125)
C5: (50.258,101.756,137.553)
O3': (55.844,103.485,138.185)
OP1: (55.992,103.027,135.736)
OP2: (57.458,104.824,136.847)
C3': (52.896,107.224,136.114)
C1': (52.025,105.454,134.809)
C5': (55.240,106.273,135.569)
O4': (53.278,105.795,134.251)
C8: (52.857,103.080,134.915)
O2': (50.715,106.230,136.653)
C6: (50.275,101.066,133.691)
C5: (51.194,101.992,134.182)
C4: (50.792,103.310,134.244)
P: (56.163,104.108,136.743)
C4': (53.920,106.809,135.063)
C2': (52.039,105.965,136.246)
C2: (48.804,102.823,133.456)
N1: (49.058,101.521,133.329)
N3: (49.595,103.797,133.897)
N6: (50.543,99.765,133.556)
N7: (52.498,101.857,134.623)
N9: (51.885,104.012,134.680)
O5': (55.025,105.196,136.498)
O3': (52.122,108.309,135.598)
OP2: (57.458,104.824,136.847)
C3': (52.896,107.224,136.114)
C1': (52.025,105.454,134.809)
C5': (55.240,106.273,135.569)
O4': (53.278,105.795,134.251)
C8: (52.857,103.080,134.915)
O2': (50.715,106.230,136.653)
C6: (50.275,101.066,133.691)
C5: (51.194,101.992,134.182)
C4: (50.792,103.310,134.244)
P: (56.163,104.108,136.743)
C4': (53.920,106.809,135.063)
C2': (52.039,105.965,136.246)
C2: (48.804,102.823,133.456)
N1: (49.058,101.521,133.329)
N3: (49.595,103.797,133.897)
N6: (50.543,99.765,133.556)
N7: (52.498,101.857,134.623)
N9: (51.885,104.012,134.680)
O5': (55.025,105.196,136.498)
O3': (52.122,108.309,135.598)
Image (generated by PyMOL):