Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01952:01953
Extra
PDB:
ATOM 1 O3' G A1951 103.647 112.322 107.615 1.00 50.36 O
ATOM 2 P C A1952 102.090 112.058 107.930 1.00 50.01 P
ATOM 3 OP1 C A1952 101.308 113.024 107.119 1.00 47.81 O
ATOM 4 OP2 C A1952 101.905 112.027 109.403 1.00 50.33 O
ATOM 5 O5' C A1952 101.802 110.592 107.369 1.00 51.84 O
ATOM 6 C5' C A1952 101.858 109.435 108.234 1.00 51.01 C
ATOM 7 C4' C A1952 100.600 108.598 108.099 1.00 51.27 C
ATOM 8 O4' C A1952 99.438 109.403 108.428 1.00 49.90 O
ATOM 9 C3' C A1952 100.262 108.058 106.720 1.00 52.13 C
ATOM 10 O3' C A1952 101.012 106.891 106.409 1.00 57.26 O
ATOM 11 C2' C A1952 98.777 107.742 106.858 1.00 51.14 C
ATOM 12 O2' C A1952 98.513 106.521 107.517 1.00 49.68 O
ATOM 13 C1' C A1952 98.305 108.897 107.741 1.00 49.72 C
ATOM 14 N1 C A1952 97.675 109.985 106.974 1.00 49.52 N
ATOM 15 C2 C A1952 96.281 109.986 106.830 1.00 50.16 C
ATOM 16 O2 C A1952 95.616 109.077 107.358 1.00 51.18 O
ATOM 17 N3 C A1952 95.692 110.974 106.120 1.00 50.01 N
ATOM 18 C4 C A1952 96.437 111.932 105.566 1.00 49.49 C
ATOM 19 N4 C A1952 95.815 112.883 104.876 1.00 50.50 N
ATOM 20 C5 C A1952 97.854 111.956 105.697 1.00 49.27 C
ATOM 21 C6 C A1952 98.426 110.974 106.403 1.00 49.58 C
ATOM 22 P A A1953 101.491 106.629 104.893 1.00 61.21 P
ATOM 23 OP1 A A1953 100.302 106.430 104.016 1.00 59.71 O
ATOM 24 OP2 A A1953 102.562 105.590 104.938 1.00 60.60 O
ATOM 25 O5' A A1953 102.169 108.004 104.475 1.00 58.84 O
TER
ATOM 1 O3' C B1952 101.012 106.891 106.409 1.00 57.26 O
ATOM 2 P A B1953 101.491 106.629 104.893 1.00 61.21 P
ATOM 3 OP1 A B1953 100.302 106.430 104.016 1.00 59.71 O
ATOM 4 OP2 A B1953 102.562 105.590 104.938 1.00 60.60 O
ATOM 5 O5' A B1953 102.169 108.004 104.475 1.00 58.84 O
ATOM 6 C5' A B1953 102.820 108.140 103.212 1.00 56.06 C
ATOM 7 C4' A B1953 102.539 109.502 102.636 1.00 54.68 C
ATOM 8 O4' A B1953 101.175 109.568 102.136 1.00 54.68 O
ATOM 9 C3' A B1953 102.692 110.663 103.608 1.00 53.43 C
ATOM 10 O3' A B1953 103.177 111.768 102.883 1.00 54.37 O
ATOM 11 C2' A B1953 101.253 110.941 104.030 1.00 53.01 C
ATOM 12 O2' A B1953 101.053 112.277 104.452 1.00 50.27 O
ATOM 13 C1' A B1953 100.513 110.668 102.722 1.00 53.11 C
ATOM 14 N9 A B1953 99.096 110.337 102.864 1.00 52.54 N
ATOM 15 C8 A B1953 98.525 109.247 103.469 1.00 52.52 C
ATOM 16 N7 A B1953 97.214 109.244 103.419 1.00 52.66 N
ATOM 17 C5 A B1953 96.904 110.413 102.736 1.00 52.38 C
ATOM 18 C6 A B1953 95.681 110.998 102.362 1.00 52.42 C
ATOM 19 N6 A B1953 94.486 110.469 102.640 1.00 54.61 N
ATOM 20 N1 A B1953 95.724 112.166 101.689 1.00 51.20 N
ATOM 21 C2 A B1953 96.912 112.704 101.424 1.00 51.21 C
ATOM 22 N3 A B1953 98.125 112.257 101.726 1.00 52.62 N
ATOM 23 C4 A B1953 98.051 111.093 102.389 1.00 52.15 C
ATOM 24 P U B1954 104.581 112.425 103.274 1.00 53.94 P
ATOM 25 OP1 U B1954 105.662 111.671 102.576 1.00 53.04 O
ATOM 26 OP2 U B1954 104.639 112.606 104.741 1.00 53.67 O
ATOM 27 O5' U B1954 104.439 113.875 102.653 1.00 52.20 O
TER
ATOM 2 P C A1952 102.090 112.058 107.930 1.00 50.01 P
ATOM 3 OP1 C A1952 101.308 113.024 107.119 1.00 47.81 O
ATOM 4 OP2 C A1952 101.905 112.027 109.403 1.00 50.33 O
ATOM 5 O5' C A1952 101.802 110.592 107.369 1.00 51.84 O
ATOM 6 C5' C A1952 101.858 109.435 108.234 1.00 51.01 C
ATOM 7 C4' C A1952 100.600 108.598 108.099 1.00 51.27 C
ATOM 8 O4' C A1952 99.438 109.403 108.428 1.00 49.90 O
ATOM 9 C3' C A1952 100.262 108.058 106.720 1.00 52.13 C
ATOM 10 O3' C A1952 101.012 106.891 106.409 1.00 57.26 O
ATOM 11 C2' C A1952 98.777 107.742 106.858 1.00 51.14 C
ATOM 12 O2' C A1952 98.513 106.521 107.517 1.00 49.68 O
ATOM 13 C1' C A1952 98.305 108.897 107.741 1.00 49.72 C
ATOM 14 N1 C A1952 97.675 109.985 106.974 1.00 49.52 N
ATOM 15 C2 C A1952 96.281 109.986 106.830 1.00 50.16 C
ATOM 16 O2 C A1952 95.616 109.077 107.358 1.00 51.18 O
ATOM 17 N3 C A1952 95.692 110.974 106.120 1.00 50.01 N
ATOM 18 C4 C A1952 96.437 111.932 105.566 1.00 49.49 C
ATOM 19 N4 C A1952 95.815 112.883 104.876 1.00 50.50 N
ATOM 20 C5 C A1952 97.854 111.956 105.697 1.00 49.27 C
ATOM 21 C6 C A1952 98.426 110.974 106.403 1.00 49.58 C
ATOM 22 P A A1953 101.491 106.629 104.893 1.00 61.21 P
ATOM 23 OP1 A A1953 100.302 106.430 104.016 1.00 59.71 O
ATOM 24 OP2 A A1953 102.562 105.590 104.938 1.00 60.60 O
ATOM 25 O5' A A1953 102.169 108.004 104.475 1.00 58.84 O
TER
ATOM 1 O3' C B1952 101.012 106.891 106.409 1.00 57.26 O
ATOM 2 P A B1953 101.491 106.629 104.893 1.00 61.21 P
ATOM 3 OP1 A B1953 100.302 106.430 104.016 1.00 59.71 O
ATOM 4 OP2 A B1953 102.562 105.590 104.938 1.00 60.60 O
ATOM 5 O5' A B1953 102.169 108.004 104.475 1.00 58.84 O
ATOM 6 C5' A B1953 102.820 108.140 103.212 1.00 56.06 C
ATOM 7 C4' A B1953 102.539 109.502 102.636 1.00 54.68 C
ATOM 8 O4' A B1953 101.175 109.568 102.136 1.00 54.68 O
ATOM 9 C3' A B1953 102.692 110.663 103.608 1.00 53.43 C
ATOM 10 O3' A B1953 103.177 111.768 102.883 1.00 54.37 O
ATOM 11 C2' A B1953 101.253 110.941 104.030 1.00 53.01 C
ATOM 12 O2' A B1953 101.053 112.277 104.452 1.00 50.27 O
ATOM 13 C1' A B1953 100.513 110.668 102.722 1.00 53.11 C
ATOM 14 N9 A B1953 99.096 110.337 102.864 1.00 52.54 N
ATOM 15 C8 A B1953 98.525 109.247 103.469 1.00 52.52 C
ATOM 16 N7 A B1953 97.214 109.244 103.419 1.00 52.66 N
ATOM 17 C5 A B1953 96.904 110.413 102.736 1.00 52.38 C
ATOM 18 C6 A B1953 95.681 110.998 102.362 1.00 52.42 C
ATOM 19 N6 A B1953 94.486 110.469 102.640 1.00 54.61 N
ATOM 20 N1 A B1953 95.724 112.166 101.689 1.00 51.20 N
ATOM 21 C2 A B1953 96.912 112.704 101.424 1.00 51.21 C
ATOM 22 N3 A B1953 98.125 112.257 101.726 1.00 52.62 N
ATOM 23 C4 A B1953 98.051 111.093 102.389 1.00 52.15 C
ATOM 24 P U B1954 104.581 112.425 103.274 1.00 53.94 P
ATOM 25 OP1 U B1954 105.662 111.671 102.576 1.00 53.04 O
ATOM 26 OP2 U B1954 104.639 112.606 104.741 1.00 53.67 O
ATOM 27 O5' U B1954 104.439 113.875 102.653 1.00 52.20 O
TER
Atoms:
C2: (96.281,109.986,106.830)
OP1: (101.308,113.024,107.119)
OP2: (101.905,112.027,109.403)
C4: (96.437,111.932,105.566)
O5': (101.802,110.592,107.369)
C3': (100.262,108.058,106.720)
C1': (98.305,108.897,107.741)
O4': (99.438,109.403,108.428)
C5': (101.858,109.435,108.234)
P: (102.090,112.058,107.930)
O2: (95.616,109.077,107.358)
C4': (100.600,108.598,108.099)
C2': (98.777,107.742,106.858)
O2': (98.513,106.521,107.517)
N1: (97.675,109.985,106.974)
N3: (95.692,110.974,106.120)
N4: (95.815,112.883,104.876)
C6: (98.426,110.974,106.403)
C5: (97.854,111.956,105.697)
O3': (101.012,106.891,106.409)
OP1: (101.308,113.024,107.119)
OP2: (101.905,112.027,109.403)
C4: (96.437,111.932,105.566)
O5': (101.802,110.592,107.369)
C3': (100.262,108.058,106.720)
C1': (98.305,108.897,107.741)
O4': (99.438,109.403,108.428)
C5': (101.858,109.435,108.234)
P: (102.090,112.058,107.930)
O2: (95.616,109.077,107.358)
C4': (100.600,108.598,108.099)
C2': (98.777,107.742,106.858)
O2': (98.513,106.521,107.517)
N1: (97.675,109.985,106.974)
N3: (95.692,110.974,106.120)
N4: (95.815,112.883,104.876)
C6: (98.426,110.974,106.403)
C5: (97.854,111.956,105.697)
O3': (101.012,106.891,106.409)
OP1: (100.302,106.430,104.016)
OP2: (102.562,105.590,104.938)
C3': (102.692,110.663,103.608)
C1': (100.513,110.668,102.722)
C5': (102.820,108.140,103.212)
O4': (101.175,109.568,102.136)
C8: (98.525,109.247,103.469)
O2': (101.053,112.277,104.452)
C6: (95.681,110.998,102.362)
C5: (96.904,110.413,102.736)
C4: (98.051,111.093,102.389)
P: (101.491,106.629,104.893)
C4': (102.539,109.502,102.636)
C2': (101.253,110.941,104.030)
C2: (96.912,112.704,101.424)
N1: (95.724,112.166,101.689)
N3: (98.125,112.257,101.726)
N6: (94.486,110.469,102.640)
N7: (97.214,109.244,103.419)
N9: (99.096,110.337,102.864)
O5': (102.169,108.004,104.475)
O3': (103.177,111.768,102.883)
OP2: (102.562,105.590,104.938)
C3': (102.692,110.663,103.608)
C1': (100.513,110.668,102.722)
C5': (102.820,108.140,103.212)
O4': (101.175,109.568,102.136)
C8: (98.525,109.247,103.469)
O2': (101.053,112.277,104.452)
C6: (95.681,110.998,102.362)
C5: (96.904,110.413,102.736)
C4: (98.051,111.093,102.389)
P: (101.491,106.629,104.893)
C4': (102.539,109.502,102.636)
C2': (101.253,110.941,104.030)
C2: (96.912,112.704,101.424)
N1: (95.724,112.166,101.689)
N3: (98.125,112.257,101.726)
N6: (94.486,110.469,102.640)
N7: (97.214,109.244,103.419)
N9: (99.096,110.337,102.864)
O5': (102.169,108.004,104.475)
O3': (103.177,111.768,102.883)
Image (generated by PyMOL):