Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5F:61186:61187
Extra
PDB:
ATOM 1 O3' U A1185 238.738 -33.376 256.172 1.00 85.34 O
ATOM 2 P C A1186 240.000 -33.353 257.175 1.00 81.14 P
ATOM 3 OP1 C A1186 239.870 -34.549 258.053 1.00 81.27 O
ATOM 4 OP2 C A1186 240.062 -32.007 257.808 1.00 81.13 O
ATOM 5 O5' C A1186 241.212 -33.562 256.177 1.00 81.03 O
ATOM 6 C5' C A1186 241.316 -34.778 255.454 1.00 81.05 C
ATOM 7 C4' C A1186 242.237 -34.654 254.276 1.00 80.97 C
ATOM 8 O4' C A1186 241.746 -33.636 253.373 1.00 80.88 O
ATOM 9 C3' C A1186 243.650 -34.219 254.589 1.00 80.95 C
ATOM 10 O3' C A1186 244.457 -35.284 255.050 1.00 81.05 O
ATOM 11 C2' C A1186 244.115 -33.620 253.265 1.00 80.87 C
ATOM 12 O2' C A1186 244.494 -34.650 252.359 1.00 80.93 O
ATOM 13 C1' C A1186 242.822 -32.972 252.754 1.00 80.80 C
ATOM 14 N1 C A1186 242.730 -31.519 253.087 1.00 80.73 N
ATOM 15 C2 C A1186 243.226 -30.534 252.199 1.00 80.63 C
ATOM 16 O2 C A1186 243.762 -30.863 251.132 1.00 80.62 O
ATOM 17 N3 C A1186 243.133 -29.223 252.506 1.00 80.58 N
ATOM 18 C4 C A1186 242.561 -28.877 253.648 1.00 80.62 C
ATOM 19 N4 C A1186 242.499 -27.581 253.906 1.00 80.59 N
ATOM 20 C5 C A1186 242.036 -29.828 254.574 1.00 80.73 C
ATOM 21 C6 C A1186 242.133 -31.126 254.258 1.00 80.77 C
ATOM 22 P A A1187 245.625 -34.989 256.099 1.00 76.71 P
ATOM 23 OP1 A A1187 246.716 -34.339 255.348 1.00 76.68 O
ATOM 24 OP2 A A1187 245.911 -36.272 256.814 1.00 76.83 O
ATOM 25 O5' A A1187 244.949 -33.932 257.088 1.00 76.68 O
TER
ATOM 1 O3' C B1186 244.457 -35.284 255.050 1.00 81.05 O
ATOM 2 P A B1187 245.625 -34.989 256.099 1.00 76.71 P
ATOM 3 OP1 A B1187 246.716 -34.339 255.348 1.00 76.68 O
ATOM 4 OP2 A B1187 245.911 -36.272 256.814 1.00 76.83 O
ATOM 5 O5' A B1187 244.949 -33.932 257.088 1.00 76.68 O
ATOM 6 C5' A B1187 244.963 -34.133 258.498 1.00 76.79 C
ATOM 7 C4' A B1187 244.817 -32.834 259.249 1.00 76.79 C
ATOM 8 O4' A B1187 245.555 -31.805 258.549 1.00 76.71 O
ATOM 9 C3' A B1187 243.393 -32.314 259.376 1.00 76.78 C
ATOM 10 O3' A B1187 243.265 -31.563 260.578 1.00 76.88 O
ATOM 11 C2' A B1187 243.276 -31.380 258.192 1.00 76.65 C
ATOM 12 O2' A B1187 242.293 -30.390 258.345 1.00 76.65 O
ATOM 13 C1' A B1187 244.678 -30.779 258.141 1.00 76.63 C
ATOM 14 N9 A B1187 245.086 -30.338 256.805 1.00 76.51 N
ATOM 15 C8 A B1187 245.554 -31.088 255.745 1.00 76.48 C
ATOM 16 N7 A B1187 245.852 -30.403 254.670 1.00 76.40 N
ATOM 17 C5 A B1187 245.560 -29.103 255.050 1.00 76.36 C
ATOM 18 C6 A B1187 245.634 -27.873 254.352 1.00 76.27 C
ATOM 19 N6 A B1187 246.056 -27.774 253.077 1.00 76.20 N
ATOM 20 N1 A B1187 245.251 -26.744 255.032 1.00 76.27 N
ATOM 21 C2 A B1187 244.828 -26.851 256.312 1.00 76.37 C
ATOM 22 N3 A B1187 244.703 -27.953 257.072 1.00 76.46 N
ATOM 23 C4 A B1187 245.091 -29.047 256.367 1.00 76.43 C
ATOM 24 P A B1188 242.382 -32.139 261.786 1.00 68.20 P
ATOM 25 OP1 A B1188 241.354 -31.138 262.091 1.00 68.26 O
ATOM 26 OP2 A B1188 243.321 -32.544 262.858 1.00 68.32 O
ATOM 27 O5' A B1188 241.698 -33.443 261.161 1.00 68.18 O
TER
ATOM 2 P C A1186 240.000 -33.353 257.175 1.00 81.14 P
ATOM 3 OP1 C A1186 239.870 -34.549 258.053 1.00 81.27 O
ATOM 4 OP2 C A1186 240.062 -32.007 257.808 1.00 81.13 O
ATOM 5 O5' C A1186 241.212 -33.562 256.177 1.00 81.03 O
ATOM 6 C5' C A1186 241.316 -34.778 255.454 1.00 81.05 C
ATOM 7 C4' C A1186 242.237 -34.654 254.276 1.00 80.97 C
ATOM 8 O4' C A1186 241.746 -33.636 253.373 1.00 80.88 O
ATOM 9 C3' C A1186 243.650 -34.219 254.589 1.00 80.95 C
ATOM 10 O3' C A1186 244.457 -35.284 255.050 1.00 81.05 O
ATOM 11 C2' C A1186 244.115 -33.620 253.265 1.00 80.87 C
ATOM 12 O2' C A1186 244.494 -34.650 252.359 1.00 80.93 O
ATOM 13 C1' C A1186 242.822 -32.972 252.754 1.00 80.80 C
ATOM 14 N1 C A1186 242.730 -31.519 253.087 1.00 80.73 N
ATOM 15 C2 C A1186 243.226 -30.534 252.199 1.00 80.63 C
ATOM 16 O2 C A1186 243.762 -30.863 251.132 1.00 80.62 O
ATOM 17 N3 C A1186 243.133 -29.223 252.506 1.00 80.58 N
ATOM 18 C4 C A1186 242.561 -28.877 253.648 1.00 80.62 C
ATOM 19 N4 C A1186 242.499 -27.581 253.906 1.00 80.59 N
ATOM 20 C5 C A1186 242.036 -29.828 254.574 1.00 80.73 C
ATOM 21 C6 C A1186 242.133 -31.126 254.258 1.00 80.77 C
ATOM 22 P A A1187 245.625 -34.989 256.099 1.00 76.71 P
ATOM 23 OP1 A A1187 246.716 -34.339 255.348 1.00 76.68 O
ATOM 24 OP2 A A1187 245.911 -36.272 256.814 1.00 76.83 O
ATOM 25 O5' A A1187 244.949 -33.932 257.088 1.00 76.68 O
TER
ATOM 1 O3' C B1186 244.457 -35.284 255.050 1.00 81.05 O
ATOM 2 P A B1187 245.625 -34.989 256.099 1.00 76.71 P
ATOM 3 OP1 A B1187 246.716 -34.339 255.348 1.00 76.68 O
ATOM 4 OP2 A B1187 245.911 -36.272 256.814 1.00 76.83 O
ATOM 5 O5' A B1187 244.949 -33.932 257.088 1.00 76.68 O
ATOM 6 C5' A B1187 244.963 -34.133 258.498 1.00 76.79 C
ATOM 7 C4' A B1187 244.817 -32.834 259.249 1.00 76.79 C
ATOM 8 O4' A B1187 245.555 -31.805 258.549 1.00 76.71 O
ATOM 9 C3' A B1187 243.393 -32.314 259.376 1.00 76.78 C
ATOM 10 O3' A B1187 243.265 -31.563 260.578 1.00 76.88 O
ATOM 11 C2' A B1187 243.276 -31.380 258.192 1.00 76.65 C
ATOM 12 O2' A B1187 242.293 -30.390 258.345 1.00 76.65 O
ATOM 13 C1' A B1187 244.678 -30.779 258.141 1.00 76.63 C
ATOM 14 N9 A B1187 245.086 -30.338 256.805 1.00 76.51 N
ATOM 15 C8 A B1187 245.554 -31.088 255.745 1.00 76.48 C
ATOM 16 N7 A B1187 245.852 -30.403 254.670 1.00 76.40 N
ATOM 17 C5 A B1187 245.560 -29.103 255.050 1.00 76.36 C
ATOM 18 C6 A B1187 245.634 -27.873 254.352 1.00 76.27 C
ATOM 19 N6 A B1187 246.056 -27.774 253.077 1.00 76.20 N
ATOM 20 N1 A B1187 245.251 -26.744 255.032 1.00 76.27 N
ATOM 21 C2 A B1187 244.828 -26.851 256.312 1.00 76.37 C
ATOM 22 N3 A B1187 244.703 -27.953 257.072 1.00 76.46 N
ATOM 23 C4 A B1187 245.091 -29.047 256.367 1.00 76.43 C
ATOM 24 P A B1188 242.382 -32.139 261.786 1.00 68.20 P
ATOM 25 OP1 A B1188 241.354 -31.138 262.091 1.00 68.26 O
ATOM 26 OP2 A B1188 243.321 -32.544 262.858 1.00 68.32 O
ATOM 27 O5' A B1188 241.698 -33.443 261.161 1.00 68.18 O
TER
Atoms:
C2: (243.226,-30.534,252.199)
OP1: (239.870,-34.549,258.053)
OP2: (240.062,-32.007,257.808)
C4: (242.561,-28.877,253.648)
O5': (241.212,-33.562,256.177)
C3': (243.650,-34.219,254.589)
C1': (242.822,-32.972,252.754)
O4': (241.746,-33.636,253.373)
C5': (241.316,-34.778,255.454)
P: (240.000,-33.353,257.175)
O2: (243.762,-30.863,251.132)
C4': (242.237,-34.654,254.276)
C2': (244.115,-33.620,253.265)
O2': (244.494,-34.650,252.359)
N1: (242.730,-31.519,253.087)
N3: (243.133,-29.223,252.506)
N4: (242.499,-27.581,253.906)
C6: (242.133,-31.126,254.258)
C5: (242.036,-29.828,254.574)
O3': (244.457,-35.284,255.050)
OP1: (239.870,-34.549,258.053)
OP2: (240.062,-32.007,257.808)
C4: (242.561,-28.877,253.648)
O5': (241.212,-33.562,256.177)
C3': (243.650,-34.219,254.589)
C1': (242.822,-32.972,252.754)
O4': (241.746,-33.636,253.373)
C5': (241.316,-34.778,255.454)
P: (240.000,-33.353,257.175)
O2: (243.762,-30.863,251.132)
C4': (242.237,-34.654,254.276)
C2': (244.115,-33.620,253.265)
O2': (244.494,-34.650,252.359)
N1: (242.730,-31.519,253.087)
N3: (243.133,-29.223,252.506)
N4: (242.499,-27.581,253.906)
C6: (242.133,-31.126,254.258)
C5: (242.036,-29.828,254.574)
O3': (244.457,-35.284,255.050)
OP1: (246.716,-34.339,255.348)
OP2: (245.911,-36.272,256.814)
C3': (243.393,-32.314,259.376)
C1': (244.678,-30.779,258.141)
C5': (244.963,-34.133,258.498)
O4': (245.555,-31.805,258.549)
C8: (245.554,-31.088,255.745)
O2': (242.293,-30.390,258.345)
C6: (245.634,-27.873,254.352)
C5: (245.560,-29.103,255.050)
C4: (245.091,-29.047,256.367)
P: (245.625,-34.989,256.099)
C4': (244.817,-32.834,259.249)
C2': (243.276,-31.380,258.192)
C2: (244.828,-26.851,256.312)
N1: (245.251,-26.744,255.032)
N3: (244.703,-27.953,257.072)
N6: (246.056,-27.774,253.077)
N7: (245.852,-30.403,254.670)
N9: (245.086,-30.338,256.805)
O5': (244.949,-33.932,257.088)
O3': (243.265,-31.563,260.578)
OP2: (245.911,-36.272,256.814)
C3': (243.393,-32.314,259.376)
C1': (244.678,-30.779,258.141)
C5': (244.963,-34.133,258.498)
O4': (245.555,-31.805,258.549)
C8: (245.554,-31.088,255.745)
O2': (242.293,-30.390,258.345)
C6: (245.634,-27.873,254.352)
C5: (245.560,-29.103,255.050)
C4: (245.091,-29.047,256.367)
P: (245.625,-34.989,256.099)
C4': (244.817,-32.834,259.249)
C2': (243.276,-31.380,258.192)
C2: (244.828,-26.851,256.312)
N1: (245.251,-26.744,255.032)
N3: (244.703,-27.953,257.072)
N6: (246.056,-27.774,253.077)
N7: (245.852,-30.403,254.670)
N9: (245.086,-30.338,256.805)
O5': (244.949,-33.932,257.088)
O3': (243.265,-31.563,260.578)
Image (generated by PyMOL):