ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3BNO:B13:B14

Extra

PDB:
ATOM 1 O3' A A 12 -14.495 0.372 2.225 1.00 75.62 O
ATOM 2 P C A 13 -15.315 -0.874 2.800 1.00 74.94 P
ATOM 3 OP1 C A 13 -16.746 -0.506 2.895 1.00 79.33 O
ATOM 4 OP2 C A 13 -14.596 -1.339 4.017 1.00 79.61 O
ATOM 5 O5' C A 13 -15.189 -1.944 1.635 1.00 72.74 O
ATOM 6 C5' C A 13 -15.607 -1.615 0.324 1.00 72.29 C
ATOM 7 C4' C A 13 -15.002 -2.567 -0.662 1.00 69.01 C
ATOM 8 O4' C A 13 -13.563 -2.447 -0.596 1.00 69.95 O
ATOM 9 C3' C A 13 -15.253 -4.029 -0.377 1.00 70.17 C
ATOM 10 O3' C A 13 -16.491 -4.441 -0.936 1.00 75.98 O
ATOM 11 C2' C A 13 -14.110 -4.687 -1.129 1.00 69.77 C
ATOM 12 O2' C A 13 -14.397 -4.766 -2.501 1.00 69.31 O
ATOM 13 C1' C A 13 -12.970 -3.697 -0.895 1.00 68.36 C
ATOM 14 N1 C A 13 -12.066 -4.066 0.210 1.00 68.55 N
ATOM 15 C2 C A 13 -11.235 -5.167 0.055 1.00 66.64 C
ATOM 16 O2 C A 13 -11.306 -5.821 -0.992 1.00 65.91 O
ATOM 17 N3 C A 13 -10.379 -5.499 1.052 1.00 68.57 N
ATOM 18 C4 C A 13 -10.349 -4.778 2.175 1.00 69.43 C
ATOM 19 N4 C A 13 -9.490 -5.139 3.139 1.00 65.71 N
ATOM 20 C5 C A 13 -11.199 -3.656 2.364 1.00 71.36 C
ATOM 21 C6 C A 13 -12.034 -3.338 1.365 1.00 71.77 C
ATOM 22 P A A 14 -17.258 -5.707 -0.309 1.00 79.63 P
ATOM 23 OP1 A A 14 -16.422 -6.912 -0.548 1.00 78.35 O
ATOM 24 OP2 A A 14 -18.663 -5.695 -0.794 1.00 79.45 O
ATOM 25 O5' A A 14 -17.238 -5.375 1.250 1.00 79.29 O
TER

ATOM 1 O3' C B 13 -16.491 -4.441 -0.936 1.00 75.98 O
ATOM 2 P A B 14 -17.258 -5.707 -0.309 1.00 79.63 P
ATOM 3 OP1 A B 14 -16.422 -6.912 -0.548 1.00 78.35 O
ATOM 4 OP2 A B 14 -18.663 -5.695 -0.794 1.00 79.45 O
ATOM 5 O5' A B 14 -17.238 -5.375 1.250 1.00 79.29 O
ATOM 6 C5' A B 14 -18.308 -5.765 2.101 1.00 81.54 C
ATOM 7 C4' A B 14 -17.860 -5.722 3.538 1.00 81.27 C
ATOM 8 O4' A B 14 -16.804 -6.703 3.727 1.00 79.93 O
ATOM 9 C3' A B 14 -17.282 -4.391 4.003 1.00 81.65 C
ATOM 10 O3' A B 14 -17.553 -4.229 5.383 1.00 85.76 O
ATOM 11 C2' A B 14 -15.783 -4.590 3.817 1.00 81.04 C
ATOM 12 O2' A B 14 -15.027 -3.799 4.711 1.00 80.61 O
ATOM 13 C1' A B 14 -15.636 -6.061 4.193 1.00 78.60 C
ATOM 14 N9 A B 14 -14.487 -6.739 3.600 1.00 74.98 N
ATOM 15 C8 A B 14 -14.407 -7.314 2.360 1.00 73.79 C
ATOM 16 N7 A B 14 -13.263 -7.903 2.124 1.00 74.80 N
ATOM 17 C5 A B 14 -12.535 -7.693 3.285 1.00 74.84 C
ATOM 18 C6 A B 14 -11.240 -8.079 3.671 1.00 74.93 C
ATOM 19 N6 A B 14 -10.422 -8.796 2.894 1.00 75.45 N
ATOM 20 N1 A B 14 -10.810 -7.702 4.896 1.00 71.72 N
ATOM 21 C2 A B 14 -11.634 -6.990 5.670 1.00 75.63 C
ATOM 22 N3 A B 14 -12.875 -6.570 5.420 1.00 76.83 N
ATOM 23 C4 A B 14 -13.270 -6.962 4.196 1.00 75.19 C
ATOM 24 P A B 15 -18.888 -3.477 5.846 1.00 88.45 P
ATOM 25 OP1 A B 15 -19.367 -2.644 4.713 1.00 90.80 O
ATOM 26 OP2 A B 15 -18.567 -2.837 7.151 1.00 87.45 O
ATOM 27 O5' A B 15 -19.946 -4.651 6.059 1.00 90.29 O
TER

Atoms:
C2: (-11.235,-5.167,0.055)
OP1: (-16.746,-0.506,2.895)
OP2: (-14.596,-1.339,4.017)
C4: (-10.349,-4.778,2.175)
O5': (-15.189,-1.944,1.635)
C3': (-15.253,-4.029,-0.377)
C1': (-12.970,-3.697,-0.895)
O4': (-13.563,-2.447,-0.596)
C5': (-15.607,-1.615,0.324)
P: (-15.315,-0.874,2.800)
O2: (-11.306,-5.821,-0.992)
C4': (-15.002,-2.567,-0.662)
C2': (-14.110,-4.687,-1.129)
O2': (-14.397,-4.766,-2.501)
N1: (-12.066,-4.066,0.210)
N3: (-10.379,-5.499,1.052)
N4: (-9.490,-5.139,3.139)
C6: (-12.034,-3.338,1.365)
C5: (-11.199,-3.656,2.364)
O3': (-16.491,-4.441,-0.936)
OP1: (-16.422,-6.912,-0.548)
OP2: (-18.663,-5.695,-0.794)
C3': (-17.282,-4.391,4.003)
C1': (-15.636,-6.061,4.193)
C5': (-18.308,-5.765,2.101)
O4': (-16.804,-6.703,3.727)
C8: (-14.407,-7.314,2.360)
O2': (-15.027,-3.799,4.711)
C6: (-11.240,-8.079,3.671)
C5: (-12.535,-7.693,3.285)
C4: (-13.270,-6.962,4.196)
P: (-17.258,-5.707,-0.309)
C4': (-17.860,-5.722,3.538)
C2': (-15.783,-4.590,3.817)
C2: (-11.634,-6.990,5.670)
N1: (-10.810,-7.702,4.896)
N3: (-12.875,-6.570,5.420)
N6: (-10.422,-8.796,2.894)
N7: (-13.263,-7.903,2.124)
N9: (-14.487,-6.739,3.600)
O5': (-17.238,-5.375,1.250)
O3': (-17.553,-4.229,5.383)
Image (generated by PyMOL):
PyMOL image
show in jmol