ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:01952:01953

Extra

PDB:
ATOM 1 O3' G A1951 103.654 112.636 108.145 1.00 58.48 O
ATOM 2 P C A1952 102.101 112.366 108.456 1.00 56.97 P
ATOM 3 OP1 C A1952 101.343 113.293 107.588 1.00 56.40 O
ATOM 4 OP2 C A1952 101.915 112.426 109.924 1.00 57.57 O
ATOM 5 O5' C A1952 101.818 110.876 107.954 1.00 58.73 O
ATOM 6 C5' C A1952 101.741 109.770 108.884 1.00 59.51 C
ATOM 7 C4' C A1952 100.467 108.970 108.672 1.00 61.08 C
ATOM 8 O4' C A1952 99.307 109.800 108.944 1.00 62.39 O
ATOM 9 C3' C A1952 100.194 108.447 107.272 1.00 61.55 C
ATOM 10 O3' C A1952 100.917 107.255 107.004 1.00 64.30 O
ATOM 11 C2' C A1952 98.693 108.179 107.306 1.00 61.58 C
ATOM 12 O2' C A1952 98.335 106.955 107.911 1.00 60.89 O
ATOM 13 C1' C A1952 98.199 109.323 108.191 1.00 61.84 C
ATOM 14 N1 C A1952 97.603 110.431 107.423 1.00 61.96 N
ATOM 15 C2 C A1952 96.211 110.448 107.246 1.00 61.85 C
ATOM 16 O2 C A1952 95.522 109.548 107.758 1.00 63.42 O
ATOM 17 N3 C A1952 95.651 111.439 106.525 1.00 60.81 N
ATOM 18 C4 C A1952 96.416 112.390 105.992 1.00 61.66 C
ATOM 19 N4 C A1952 95.814 113.343 105.284 1.00 63.14 N
ATOM 20 C5 C A1952 97.832 112.405 106.162 1.00 61.36 C
ATOM 21 C6 C A1952 98.378 111.418 106.879 1.00 61.52 C
ATOM 22 P A A1953 101.440 106.963 105.513 1.00 66.41 P
ATOM 23 OP1 A A1953 100.274 106.757 104.610 1.00 65.62 O
ATOM 24 OP2 A A1953 102.495 105.912 105.617 1.00 65.98 O
ATOM 25 O5' A A1953 102.136 108.328 105.089 1.00 64.77 O
TER

ATOM 1 O3' C B1952 100.917 107.255 107.004 1.00 64.30 O
ATOM 2 P A B1953 101.440 106.963 105.513 1.00 66.41 P
ATOM 3 OP1 A B1953 100.274 106.757 104.610 1.00 65.62 O
ATOM 4 OP2 A B1953 102.495 105.912 105.617 1.00 65.98 O
ATOM 5 O5' A B1953 102.136 108.328 105.089 1.00 64.77 O
ATOM 6 C5' A B1953 102.798 108.454 103.826 1.00 62.11 C
ATOM 7 C4' A B1953 102.512 109.809 103.226 1.00 60.52 C
ATOM 8 O4' A B1953 101.160 109.854 102.691 1.00 60.61 O
ATOM 9 C3' A B1953 102.629 110.993 104.179 1.00 59.34 C
ATOM 10 O3' A B1953 103.069 112.104 103.429 1.00 59.30 O
ATOM 11 C2' A B1953 101.178 111.246 104.572 1.00 58.97 C
ATOM 12 O2' A B1953 100.954 112.582 104.973 1.00 57.94 O
ATOM 13 C1' A B1953 100.475 110.958 103.248 1.00 59.11 C
ATOM 14 N9 A B1953 99.049 110.636 103.332 1.00 57.96 N
ATOM 15 C8 A B1953 98.451 109.539 103.897 1.00 56.83 C
ATOM 16 N7 A B1953 97.148 109.536 103.783 1.00 56.96 N
ATOM 17 C5 A B1953 96.868 110.712 103.101 1.00 56.51 C
ATOM 18 C6 A B1953 95.667 111.290 102.665 1.00 57.16 C
ATOM 19 N6 A B1953 94.463 110.752 102.880 1.00 59.46 N
ATOM 20 N1 A B1953 95.740 112.461 101.997 1.00 55.93 N
ATOM 21 C2 A B1953 96.934 113.010 101.807 1.00 55.05 C
ATOM 22 N3 A B1953 98.128 112.571 102.177 1.00 56.11 N
ATOM 23 C4 A B1953 98.027 111.400 102.823 1.00 56.38 C
ATOM 24 P U B1954 104.524 112.711 103.677 1.00 57.90 P
ATOM 25 OP1 U B1954 105.506 111.868 102.954 1.00 56.63 O
ATOM 26 OP2 U B1954 104.701 112.969 105.122 1.00 57.28 O
ATOM 27 O5' U B1954 104.398 114.119 102.962 1.00 57.09 O
TER

Atoms:
C2: (96.211,110.448,107.246)
OP1: (101.343,113.293,107.588)
OP2: (101.915,112.426,109.924)
C4: (96.416,112.390,105.992)
O5': (101.818,110.876,107.954)
C3': (100.194,108.447,107.272)
C1': (98.199,109.323,108.191)
O4': (99.307,109.800,108.944)
C5': (101.741,109.770,108.884)
P: (102.101,112.366,108.456)
O2: (95.522,109.548,107.758)
C4': (100.467,108.970,108.672)
C2': (98.693,108.179,107.306)
O2': (98.335,106.955,107.911)
N1: (97.603,110.431,107.423)
N3: (95.651,111.439,106.525)
N4: (95.814,113.343,105.284)
C6: (98.378,111.418,106.879)
C5: (97.832,112.405,106.162)
O3': (100.917,107.255,107.004)
OP1: (100.274,106.757,104.610)
OP2: (102.495,105.912,105.617)
C3': (102.629,110.993,104.179)
C1': (100.475,110.958,103.248)
C5': (102.798,108.454,103.826)
O4': (101.160,109.854,102.691)
C8: (98.451,109.539,103.897)
O2': (100.954,112.582,104.973)
C6: (95.667,111.290,102.665)
C5: (96.868,110.712,103.101)
C4: (98.027,111.400,102.823)
P: (101.440,106.963,105.513)
C4': (102.512,109.809,103.226)
C2': (101.178,111.246,104.572)
C2: (96.934,113.010,101.807)
N1: (95.740,112.461,101.997)
N3: (98.128,112.571,102.177)
N6: (94.463,110.752,102.880)
N7: (97.148,109.536,103.783)
N9: (99.049,110.636,103.332)
O5': (102.136,108.328,105.089)
O3': (103.069,112.104,103.429)
Image (generated by PyMOL):
PyMOL image
show in jmol