Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02234:02235
Extra
PDB:
ATOM 1 O3' C A2233 53.118 72.141 82.533 1.00 44.46 O
ATOM 2 P C A2234 52.510 72.920 81.275 1.00 44.00 P
ATOM 3 OP1 C A2234 52.382 71.937 80.168 1.00 42.87 O
ATOM 4 OP2 C A2234 53.324 74.143 81.075 1.00 45.93 O
ATOM 5 O5' C A2234 51.063 73.359 81.769 1.00 42.38 O
ATOM 6 C5' C A2234 50.177 72.413 82.387 1.00 42.30 C
ATOM 7 C4' C A2234 49.144 73.134 83.210 1.00 41.25 C
ATOM 8 O4' C A2234 49.812 73.847 84.279 1.00 40.91 O
ATOM 9 C3' C A2234 48.382 74.226 82.486 1.00 40.82 C
ATOM 10 O3' C A2234 47.311 73.718 81.708 1.00 41.27 O
ATOM 11 C2' C A2234 47.899 75.095 83.634 1.00 40.14 C
ATOM 12 O2' C A2234 46.776 74.547 84.286 1.00 40.55 O
ATOM 13 C1' C A2234 49.099 75.034 84.575 1.00 39.53 C
ATOM 14 N1 C A2234 50.010 76.178 84.450 1.00 39.96 N
ATOM 15 C2 C A2234 49.741 77.335 85.187 1.00 42.62 C
ATOM 16 O2 C A2234 48.723 77.377 85.900 1.00 43.70 O
ATOM 17 N3 C A2234 50.591 78.388 85.101 1.00 43.28 N
ATOM 18 C4 C A2234 51.663 78.320 84.312 1.00 42.45 C
ATOM 19 N4 C A2234 52.467 79.381 84.266 1.00 42.42 N
ATOM 20 C5 C A2234 51.954 77.161 83.538 1.00 42.69 C
ATOM 21 C6 C A2234 51.108 76.122 83.637 1.00 42.53 C
ATOM 22 P A A2235 46.775 74.569 80.457 1.00 42.77 P
ATOM 23 OP1 A A2235 46.395 75.904 80.968 1.00 42.97 O
ATOM 24 OP2 A A2235 45.795 73.769 79.696 1.00 43.95 O
ATOM 25 O5' A A2235 48.057 74.752 79.539 1.00 43.95 O
TER
ATOM 1 O3' C B2234 47.311 73.718 81.708 1.00 41.27 O
ATOM 2 P A B2235 46.775 74.569 80.457 1.00 42.77 P
ATOM 3 OP1 A B2235 46.395 75.904 80.968 1.00 42.97 O
ATOM 4 OP2 A B2235 45.795 73.769 79.696 1.00 43.95 O
ATOM 5 O5' A B2235 48.057 74.752 79.539 1.00 43.95 O
ATOM 6 C5' A B2235 47.932 75.206 78.182 1.00 43.65 C
ATOM 7 C4' A B2235 49.102 76.085 77.822 1.00 43.80 C
ATOM 8 O4' A B2235 48.984 77.347 78.534 1.00 44.52 O
ATOM 9 C3' A B2235 50.482 75.532 78.174 1.00 44.29 C
ATOM 10 O3' A B2235 51.411 75.950 77.184 1.00 45.69 O
ATOM 11 C2' A B2235 50.788 76.221 79.500 1.00 42.78 C
ATOM 12 O2' A B2235 52.171 76.341 79.760 1.00 43.57 O
ATOM 13 C1' A B2235 50.170 77.592 79.259 1.00 42.25 C
ATOM 14 N9 A B2235 49.838 78.355 80.462 1.00 41.73 N
ATOM 15 C8 A B2235 48.905 78.075 81.429 1.00 41.74 C
ATOM 16 N7 A B2235 48.853 78.968 82.389 1.00 41.85 N
ATOM 17 C5 A B2235 49.820 79.897 82.030 1.00 42.89 C
ATOM 18 C6 A B2235 50.267 81.085 82.640 1.00 43.78 C
ATOM 19 N6 A B2235 49.784 81.553 83.797 1.00 42.82 N
ATOM 20 N1 A B2235 51.245 81.783 82.013 1.00 43.38 N
ATOM 21 C2 A B2235 51.733 81.309 80.862 1.00 41.75 C
ATOM 22 N3 A B2235 51.401 80.207 80.199 1.00 41.45 N
ATOM 23 C4 A B2235 50.429 79.536 80.842 1.00 42.20 C
ATOM 24 P A B2236 51.800 74.948 75.992 1.00 47.33 P
ATOM 25 OP1 A B2236 50.526 74.372 75.469 1.00 45.69 O
ATOM 26 OP2 A B2236 52.867 74.039 76.479 1.00 45.57 O
ATOM 27 O5' A B2236 52.406 75.912 74.877 1.00 46.46 O
TER
ATOM 2 P C A2234 52.510 72.920 81.275 1.00 44.00 P
ATOM 3 OP1 C A2234 52.382 71.937 80.168 1.00 42.87 O
ATOM 4 OP2 C A2234 53.324 74.143 81.075 1.00 45.93 O
ATOM 5 O5' C A2234 51.063 73.359 81.769 1.00 42.38 O
ATOM 6 C5' C A2234 50.177 72.413 82.387 1.00 42.30 C
ATOM 7 C4' C A2234 49.144 73.134 83.210 1.00 41.25 C
ATOM 8 O4' C A2234 49.812 73.847 84.279 1.00 40.91 O
ATOM 9 C3' C A2234 48.382 74.226 82.486 1.00 40.82 C
ATOM 10 O3' C A2234 47.311 73.718 81.708 1.00 41.27 O
ATOM 11 C2' C A2234 47.899 75.095 83.634 1.00 40.14 C
ATOM 12 O2' C A2234 46.776 74.547 84.286 1.00 40.55 O
ATOM 13 C1' C A2234 49.099 75.034 84.575 1.00 39.53 C
ATOM 14 N1 C A2234 50.010 76.178 84.450 1.00 39.96 N
ATOM 15 C2 C A2234 49.741 77.335 85.187 1.00 42.62 C
ATOM 16 O2 C A2234 48.723 77.377 85.900 1.00 43.70 O
ATOM 17 N3 C A2234 50.591 78.388 85.101 1.00 43.28 N
ATOM 18 C4 C A2234 51.663 78.320 84.312 1.00 42.45 C
ATOM 19 N4 C A2234 52.467 79.381 84.266 1.00 42.42 N
ATOM 20 C5 C A2234 51.954 77.161 83.538 1.00 42.69 C
ATOM 21 C6 C A2234 51.108 76.122 83.637 1.00 42.53 C
ATOM 22 P A A2235 46.775 74.569 80.457 1.00 42.77 P
ATOM 23 OP1 A A2235 46.395 75.904 80.968 1.00 42.97 O
ATOM 24 OP2 A A2235 45.795 73.769 79.696 1.00 43.95 O
ATOM 25 O5' A A2235 48.057 74.752 79.539 1.00 43.95 O
TER
ATOM 1 O3' C B2234 47.311 73.718 81.708 1.00 41.27 O
ATOM 2 P A B2235 46.775 74.569 80.457 1.00 42.77 P
ATOM 3 OP1 A B2235 46.395 75.904 80.968 1.00 42.97 O
ATOM 4 OP2 A B2235 45.795 73.769 79.696 1.00 43.95 O
ATOM 5 O5' A B2235 48.057 74.752 79.539 1.00 43.95 O
ATOM 6 C5' A B2235 47.932 75.206 78.182 1.00 43.65 C
ATOM 7 C4' A B2235 49.102 76.085 77.822 1.00 43.80 C
ATOM 8 O4' A B2235 48.984 77.347 78.534 1.00 44.52 O
ATOM 9 C3' A B2235 50.482 75.532 78.174 1.00 44.29 C
ATOM 10 O3' A B2235 51.411 75.950 77.184 1.00 45.69 O
ATOM 11 C2' A B2235 50.788 76.221 79.500 1.00 42.78 C
ATOM 12 O2' A B2235 52.171 76.341 79.760 1.00 43.57 O
ATOM 13 C1' A B2235 50.170 77.592 79.259 1.00 42.25 C
ATOM 14 N9 A B2235 49.838 78.355 80.462 1.00 41.73 N
ATOM 15 C8 A B2235 48.905 78.075 81.429 1.00 41.74 C
ATOM 16 N7 A B2235 48.853 78.968 82.389 1.00 41.85 N
ATOM 17 C5 A B2235 49.820 79.897 82.030 1.00 42.89 C
ATOM 18 C6 A B2235 50.267 81.085 82.640 1.00 43.78 C
ATOM 19 N6 A B2235 49.784 81.553 83.797 1.00 42.82 N
ATOM 20 N1 A B2235 51.245 81.783 82.013 1.00 43.38 N
ATOM 21 C2 A B2235 51.733 81.309 80.862 1.00 41.75 C
ATOM 22 N3 A B2235 51.401 80.207 80.199 1.00 41.45 N
ATOM 23 C4 A B2235 50.429 79.536 80.842 1.00 42.20 C
ATOM 24 P A B2236 51.800 74.948 75.992 1.00 47.33 P
ATOM 25 OP1 A B2236 50.526 74.372 75.469 1.00 45.69 O
ATOM 26 OP2 A B2236 52.867 74.039 76.479 1.00 45.57 O
ATOM 27 O5' A B2236 52.406 75.912 74.877 1.00 46.46 O
TER
Atoms:
C2: (49.741,77.335,85.187)
OP1: (52.382,71.937,80.168)
OP2: (53.324,74.143,81.075)
C4: (51.663,78.320,84.312)
O5': (51.063,73.359,81.769)
C3': (48.382,74.226,82.486)
C1': (49.099,75.034,84.575)
O4': (49.812,73.847,84.279)
C5': (50.177,72.413,82.387)
P: (52.510,72.920,81.275)
O2: (48.723,77.377,85.900)
C4': (49.144,73.134,83.210)
C2': (47.899,75.095,83.634)
O2': (46.776,74.547,84.286)
N1: (50.010,76.178,84.450)
N3: (50.591,78.388,85.101)
N4: (52.467,79.381,84.266)
C6: (51.108,76.122,83.637)
C5: (51.954,77.161,83.538)
O3': (47.311,73.718,81.708)
OP1: (52.382,71.937,80.168)
OP2: (53.324,74.143,81.075)
C4: (51.663,78.320,84.312)
O5': (51.063,73.359,81.769)
C3': (48.382,74.226,82.486)
C1': (49.099,75.034,84.575)
O4': (49.812,73.847,84.279)
C5': (50.177,72.413,82.387)
P: (52.510,72.920,81.275)
O2: (48.723,77.377,85.900)
C4': (49.144,73.134,83.210)
C2': (47.899,75.095,83.634)
O2': (46.776,74.547,84.286)
N1: (50.010,76.178,84.450)
N3: (50.591,78.388,85.101)
N4: (52.467,79.381,84.266)
C6: (51.108,76.122,83.637)
C5: (51.954,77.161,83.538)
O3': (47.311,73.718,81.708)
OP1: (46.395,75.904,80.968)
OP2: (45.795,73.769,79.696)
C3': (50.482,75.532,78.174)
C1': (50.170,77.592,79.259)
C5': (47.932,75.206,78.182)
O4': (48.984,77.347,78.534)
C8: (48.905,78.075,81.429)
O2': (52.171,76.341,79.760)
C6: (50.267,81.085,82.640)
C5: (49.820,79.897,82.030)
C4: (50.429,79.536,80.842)
P: (46.775,74.569,80.457)
C4': (49.102,76.085,77.822)
C2': (50.788,76.221,79.500)
C2: (51.733,81.309,80.862)
N1: (51.245,81.783,82.013)
N3: (51.401,80.207,80.199)
N6: (49.784,81.553,83.797)
N7: (48.853,78.968,82.389)
N9: (49.838,78.355,80.462)
O5': (48.057,74.752,79.539)
O3': (51.411,75.950,77.184)
OP2: (45.795,73.769,79.696)
C3': (50.482,75.532,78.174)
C1': (50.170,77.592,79.259)
C5': (47.932,75.206,78.182)
O4': (48.984,77.347,78.534)
C8: (48.905,78.075,81.429)
O2': (52.171,76.341,79.760)
C6: (50.267,81.085,82.640)
C5: (49.820,79.897,82.030)
C4: (50.429,79.536,80.842)
P: (46.775,74.569,80.457)
C4': (49.102,76.085,77.822)
C2': (50.788,76.221,79.500)
C2: (51.733,81.309,80.862)
N1: (51.245,81.783,82.013)
N3: (51.401,80.207,80.199)
N6: (49.784,81.553,83.797)
N7: (48.853,78.968,82.389)
N9: (49.838,78.355,80.462)
O5': (48.057,74.752,79.539)
O3': (51.411,75.950,77.184)
Image (generated by PyMOL):