Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0344:0345
Extra
PDB:
ATOM 1 O3' C A 343 53.322 126.161 17.872 1.00 50.57 O
ATOM 2 P C A 344 54.097 125.437 16.668 1.00 49.77 P
ATOM 3 OP1 C A 344 55.353 124.856 17.215 1.00 49.53 O
ATOM 4 OP2 C A 344 54.159 126.387 15.540 1.00 50.87 O
ATOM 5 O5' C A 344 53.146 124.230 16.260 1.00 51.42 O
ATOM 6 C5' C A 344 52.972 123.107 17.143 1.00 52.39 C
ATOM 7 C4' C A 344 51.922 122.176 16.600 1.00 52.06 C
ATOM 8 O4' C A 344 50.673 122.895 16.444 1.00 53.17 O
ATOM 9 C3' C A 344 52.203 121.617 15.220 1.00 52.14 C
ATOM 10 O3' C A 344 53.054 120.487 15.326 1.00 54.10 O
ATOM 11 C2' C A 344 50.807 121.250 14.739 1.00 52.37 C
ATOM 12 O2' C A 344 50.344 120.049 15.319 1.00 52.88 O
ATOM 13 C1' C A 344 49.981 122.403 15.309 1.00 52.40 C
ATOM 14 N1 C A 344 49.788 123.514 14.364 1.00 52.66 N
ATOM 15 C2 C A 344 48.659 123.512 13.537 1.00 52.96 C
ATOM 16 O2 C A 344 47.845 122.580 13.626 1.00 52.56 O
ATOM 17 N3 C A 344 48.481 124.526 12.663 1.00 53.88 N
ATOM 18 C4 C A 344 49.375 125.516 12.599 1.00 54.40 C
ATOM 19 N4 C A 344 49.160 126.500 11.725 1.00 55.47 N
ATOM 20 C5 C A 344 50.530 125.544 13.430 1.00 54.03 C
ATOM 21 C6 C A 344 50.696 124.534 14.289 1.00 53.09 C
ATOM 22 P A A 345 54.015 120.091 14.104 1.00 55.81 P
ATOM 23 OP1 A A 345 53.159 119.695 12.958 1.00 56.44 O
ATOM 24 OP2 A A 345 55.063 119.157 14.601 1.00 55.41 O
ATOM 25 O5' A A 345 54.725 121.455 13.721 1.00 55.91 O
TER
ATOM 1 O3' C B 344 53.054 120.487 15.326 1.00 54.10 O
ATOM 2 P A B 345 54.015 120.091 14.104 1.00 55.81 P
ATOM 3 OP1 A B 345 53.159 119.695 12.958 1.00 56.44 O
ATOM 4 OP2 A B 345 55.063 119.157 14.601 1.00 55.41 O
ATOM 5 O5' A B 345 54.725 121.455 13.721 1.00 55.91 O
ATOM 6 C5' A B 345 55.851 121.468 12.841 1.00 56.98 C
ATOM 7 C4' A B 345 55.901 122.777 12.108 1.00 58.35 C
ATOM 8 O4' A B 345 54.843 122.806 11.110 1.00 59.17 O
ATOM 9 C3' A B 345 55.695 124.005 12.989 1.00 58.75 C
ATOM 10 O3' A B 345 56.497 125.069 12.501 1.00 59.27 O
ATOM 11 C2' A B 345 54.212 124.309 12.793 1.00 59.29 C
ATOM 12 O2' A B 345 53.888 125.667 13.010 1.00 60.38 O
ATOM 13 C1' A B 345 54.021 123.934 11.325 1.00 59.42 C
ATOM 14 N9 A B 345 52.647 123.589 10.957 1.00 59.66 N
ATOM 15 C8 A B 345 51.898 122.509 11.362 1.00 60.03 C
ATOM 16 N7 A B 345 50.689 122.483 10.853 1.00 60.15 N
ATOM 17 C5 A B 345 50.634 123.621 10.059 1.00 59.95 C
ATOM 18 C6 A B 345 49.616 124.169 9.250 1.00 59.06 C
ATOM 19 N6 A B 345 48.407 123.626 9.107 1.00 57.94 N
ATOM 20 N1 A B 345 49.890 125.313 8.586 1.00 59.49 N
ATOM 21 C2 A B 345 51.103 125.866 8.731 1.00 60.24 C
ATOM 22 N3 A B 345 52.138 125.451 9.462 1.00 60.42 N
ATOM 23 C4 A B 345 51.835 124.311 10.110 1.00 60.28 C
ATOM 24 P G B 346 57.909 125.384 13.198 1.00 58.76 P
ATOM 25 OP1 G B 346 58.315 124.213 14.014 1.00 59.07 O
ATOM 26 OP2 G B 346 57.802 126.717 13.830 1.00 58.89 O
ATOM 27 O5' G B 346 58.919 125.474 11.971 1.00 60.24 O
TER
ATOM 2 P C A 344 54.097 125.437 16.668 1.00 49.77 P
ATOM 3 OP1 C A 344 55.353 124.856 17.215 1.00 49.53 O
ATOM 4 OP2 C A 344 54.159 126.387 15.540 1.00 50.87 O
ATOM 5 O5' C A 344 53.146 124.230 16.260 1.00 51.42 O
ATOM 6 C5' C A 344 52.972 123.107 17.143 1.00 52.39 C
ATOM 7 C4' C A 344 51.922 122.176 16.600 1.00 52.06 C
ATOM 8 O4' C A 344 50.673 122.895 16.444 1.00 53.17 O
ATOM 9 C3' C A 344 52.203 121.617 15.220 1.00 52.14 C
ATOM 10 O3' C A 344 53.054 120.487 15.326 1.00 54.10 O
ATOM 11 C2' C A 344 50.807 121.250 14.739 1.00 52.37 C
ATOM 12 O2' C A 344 50.344 120.049 15.319 1.00 52.88 O
ATOM 13 C1' C A 344 49.981 122.403 15.309 1.00 52.40 C
ATOM 14 N1 C A 344 49.788 123.514 14.364 1.00 52.66 N
ATOM 15 C2 C A 344 48.659 123.512 13.537 1.00 52.96 C
ATOM 16 O2 C A 344 47.845 122.580 13.626 1.00 52.56 O
ATOM 17 N3 C A 344 48.481 124.526 12.663 1.00 53.88 N
ATOM 18 C4 C A 344 49.375 125.516 12.599 1.00 54.40 C
ATOM 19 N4 C A 344 49.160 126.500 11.725 1.00 55.47 N
ATOM 20 C5 C A 344 50.530 125.544 13.430 1.00 54.03 C
ATOM 21 C6 C A 344 50.696 124.534 14.289 1.00 53.09 C
ATOM 22 P A A 345 54.015 120.091 14.104 1.00 55.81 P
ATOM 23 OP1 A A 345 53.159 119.695 12.958 1.00 56.44 O
ATOM 24 OP2 A A 345 55.063 119.157 14.601 1.00 55.41 O
ATOM 25 O5' A A 345 54.725 121.455 13.721 1.00 55.91 O
TER
ATOM 1 O3' C B 344 53.054 120.487 15.326 1.00 54.10 O
ATOM 2 P A B 345 54.015 120.091 14.104 1.00 55.81 P
ATOM 3 OP1 A B 345 53.159 119.695 12.958 1.00 56.44 O
ATOM 4 OP2 A B 345 55.063 119.157 14.601 1.00 55.41 O
ATOM 5 O5' A B 345 54.725 121.455 13.721 1.00 55.91 O
ATOM 6 C5' A B 345 55.851 121.468 12.841 1.00 56.98 C
ATOM 7 C4' A B 345 55.901 122.777 12.108 1.00 58.35 C
ATOM 8 O4' A B 345 54.843 122.806 11.110 1.00 59.17 O
ATOM 9 C3' A B 345 55.695 124.005 12.989 1.00 58.75 C
ATOM 10 O3' A B 345 56.497 125.069 12.501 1.00 59.27 O
ATOM 11 C2' A B 345 54.212 124.309 12.793 1.00 59.29 C
ATOM 12 O2' A B 345 53.888 125.667 13.010 1.00 60.38 O
ATOM 13 C1' A B 345 54.021 123.934 11.325 1.00 59.42 C
ATOM 14 N9 A B 345 52.647 123.589 10.957 1.00 59.66 N
ATOM 15 C8 A B 345 51.898 122.509 11.362 1.00 60.03 C
ATOM 16 N7 A B 345 50.689 122.483 10.853 1.00 60.15 N
ATOM 17 C5 A B 345 50.634 123.621 10.059 1.00 59.95 C
ATOM 18 C6 A B 345 49.616 124.169 9.250 1.00 59.06 C
ATOM 19 N6 A B 345 48.407 123.626 9.107 1.00 57.94 N
ATOM 20 N1 A B 345 49.890 125.313 8.586 1.00 59.49 N
ATOM 21 C2 A B 345 51.103 125.866 8.731 1.00 60.24 C
ATOM 22 N3 A B 345 52.138 125.451 9.462 1.00 60.42 N
ATOM 23 C4 A B 345 51.835 124.311 10.110 1.00 60.28 C
ATOM 24 P G B 346 57.909 125.384 13.198 1.00 58.76 P
ATOM 25 OP1 G B 346 58.315 124.213 14.014 1.00 59.07 O
ATOM 26 OP2 G B 346 57.802 126.717 13.830 1.00 58.89 O
ATOM 27 O5' G B 346 58.919 125.474 11.971 1.00 60.24 O
TER
Atoms:
C2: (48.659,123.512,13.537)
OP1: (55.353,124.856,17.215)
OP2: (54.159,126.387,15.540)
C4: (49.375,125.516,12.599)
O5': (53.146,124.230,16.260)
C3': (52.203,121.617,15.220)
C1': (49.981,122.403,15.309)
O4': (50.673,122.895,16.444)
C5': (52.972,123.107,17.143)
P: (54.097,125.437,16.668)
O2: (47.845,122.580,13.626)
C4': (51.922,122.176,16.600)
C2': (50.807,121.250,14.739)
O2': (50.344,120.049,15.319)
N1: (49.788,123.514,14.364)
N3: (48.481,124.526,12.663)
N4: (49.160,126.500,11.725)
C6: (50.696,124.534,14.289)
C5: (50.530,125.544,13.430)
O3': (53.054,120.487,15.326)
OP1: (55.353,124.856,17.215)
OP2: (54.159,126.387,15.540)
C4: (49.375,125.516,12.599)
O5': (53.146,124.230,16.260)
C3': (52.203,121.617,15.220)
C1': (49.981,122.403,15.309)
O4': (50.673,122.895,16.444)
C5': (52.972,123.107,17.143)
P: (54.097,125.437,16.668)
O2: (47.845,122.580,13.626)
C4': (51.922,122.176,16.600)
C2': (50.807,121.250,14.739)
O2': (50.344,120.049,15.319)
N1: (49.788,123.514,14.364)
N3: (48.481,124.526,12.663)
N4: (49.160,126.500,11.725)
C6: (50.696,124.534,14.289)
C5: (50.530,125.544,13.430)
O3': (53.054,120.487,15.326)
OP1: (53.159,119.695,12.958)
OP2: (55.063,119.157,14.601)
C3': (55.695,124.005,12.989)
C1': (54.021,123.934,11.325)
C5': (55.851,121.468,12.841)
O4': (54.843,122.806,11.110)
C8: (51.898,122.509,11.362)
O2': (53.888,125.667,13.010)
C6: (49.616,124.169,9.250)
C5: (50.634,123.621,10.059)
C4: (51.835,124.311,10.110)
P: (54.015,120.091,14.104)
C4': (55.901,122.777,12.108)
C2': (54.212,124.309,12.793)
C2: (51.103,125.866,8.731)
N1: (49.890,125.313,8.586)
N3: (52.138,125.451,9.462)
N6: (48.407,123.626,9.107)
N7: (50.689,122.483,10.853)
N9: (52.647,123.589,10.957)
O5': (54.725,121.455,13.721)
O3': (56.497,125.069,12.501)
OP2: (55.063,119.157,14.601)
C3': (55.695,124.005,12.989)
C1': (54.021,123.934,11.325)
C5': (55.851,121.468,12.841)
O4': (54.843,122.806,11.110)
C8: (51.898,122.509,11.362)
O2': (53.888,125.667,13.010)
C6: (49.616,124.169,9.250)
C5: (50.634,123.621,10.059)
C4: (51.835,124.311,10.110)
P: (54.015,120.091,14.104)
C4': (55.901,122.777,12.108)
C2': (54.212,124.309,12.793)
C2: (51.103,125.866,8.731)
N1: (49.890,125.313,8.586)
N3: (52.138,125.451,9.462)
N6: (48.407,123.626,9.107)
N7: (50.689,122.483,10.853)
N9: (52.647,123.589,10.957)
O5': (54.725,121.455,13.721)
O3': (56.497,125.069,12.501)
Image (generated by PyMOL):