Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1581:A1582
Extra
PDB:
ATOM 1 O3' G A1580 99.834 203.126 55.516 1.00 68.22 O
ATOM 2 P C A1581 98.273 203.386 55.833 1.00 67.51 P
ATOM 3 OP1 C A1581 97.821 204.337 54.799 1.00 67.59 O
ATOM 4 OP2 C A1581 98.079 203.716 57.272 1.00 66.87 O
ATOM 5 O5' C A1581 97.580 202.000 55.502 1.00 67.87 O
ATOM 6 C5' C A1581 97.693 201.438 54.184 1.00 68.35 C
ATOM 7 C4' C A1581 97.074 200.070 54.156 1.00 69.04 C
ATOM 8 O4' C A1581 97.908 199.162 54.911 1.00 69.64 O
ATOM 9 C3' C A1581 95.698 199.987 54.801 1.00 69.80 C
ATOM 10 O3' C A1581 94.683 200.281 53.839 1.00 70.70 O
ATOM 11 C2' C A1581 95.638 198.535 55.248 1.00 69.92 C
ATOM 12 O2' C A1581 95.303 197.687 54.173 1.00 70.65 O
ATOM 13 C1' C A1581 97.094 198.274 55.648 1.00 69.56 C
ATOM 14 N1 C A1581 97.374 198.475 57.078 1.00 69.64 N
ATOM 15 C2 C A1581 97.232 197.394 57.941 1.00 69.77 C
ATOM 16 O2 C A1581 96.878 196.301 57.475 1.00 68.67 O
ATOM 17 N3 C A1581 97.484 197.565 59.258 1.00 70.16 N
ATOM 18 C4 C A1581 97.865 198.759 59.717 1.00 69.67 C
ATOM 19 N4 C A1581 98.097 198.874 61.022 1.00 69.53 N
ATOM 20 C5 C A1581 98.021 199.881 58.858 1.00 69.89 C
ATOM 21 C6 C A1581 97.767 199.697 57.558 1.00 69.77 C
ATOM 22 P A A1582 93.278 200.916 54.303 1.00 71.35 P
ATOM 23 OP1 A A1582 92.643 200.062 55.333 1.00 71.99 O
ATOM 24 OP2 A A1582 92.533 201.225 53.058 1.00 70.56 O
ATOM 25 O5' A A1582 93.701 202.277 55.011 1.00 74.76 O
TER
ATOM 1 O3' C B1581 94.683 200.281 53.839 1.00 70.70 O
ATOM 2 P A B1582 93.278 200.916 54.303 1.00 71.35 P
ATOM 3 OP1 A B1582 92.643 200.062 55.333 1.00 71.99 O
ATOM 4 OP2 A B1582 92.533 201.225 53.058 1.00 70.56 O
ATOM 5 O5' A B1582 93.701 202.277 55.011 1.00 74.76 O
ATOM 6 C5' A B1582 92.707 203.238 55.419 1.00 79.57 C
ATOM 7 C4' A B1582 92.977 203.737 56.826 1.00 83.29 C
ATOM 8 O4' A B1582 92.760 202.657 57.776 1.00 83.26 O
ATOM 9 C3' A B1582 94.376 204.295 57.129 1.00 86.18 C
ATOM 10 O3' A B1582 94.281 205.347 58.092 1.00 91.05 O
ATOM 11 C2' A B1582 95.064 203.120 57.812 1.00 84.96 C
ATOM 12 O2' A B1582 96.115 203.525 58.671 1.00 83.57 O
ATOM 13 C1' A B1582 93.898 202.541 58.614 1.00 83.81 C
ATOM 14 N9 A B1582 94.085 201.141 58.983 1.00 83.04 N
ATOM 15 C8 A B1582 94.023 200.026 58.191 1.00 82.37 C
ATOM 16 N7 A B1582 94.287 198.914 58.829 1.00 81.93 N
ATOM 17 C5 A B1582 94.532 199.325 60.132 1.00 82.19 C
ATOM 18 C6 A B1582 94.891 198.624 61.298 1.00 82.15 C
ATOM 19 N6 A B1582 95.078 197.303 61.342 1.00 82.54 N
ATOM 20 N1 A B1582 95.061 199.338 62.434 1.00 82.14 N
ATOM 21 C2 A B1582 94.886 200.664 62.389 1.00 82.55 C
ATOM 22 N3 A B1582 94.558 201.435 61.355 1.00 82.99 N
ATOM 23 C4 A B1582 94.396 200.693 60.243 1.00 82.71 C
ATOM 24 P U B1583 94.983 206.762 57.808 1.00 94.16 P
ATOM 25 OP1 U B1583 95.383 206.775 56.375 1.00 93.51 O
ATOM 26 OP2 U B1583 95.997 207.059 58.859 1.00 94.16 O
ATOM 27 O5' U B1583 93.788 207.785 58.005 1.00 96.08 O
TER
ATOM 2 P C A1581 98.273 203.386 55.833 1.00 67.51 P
ATOM 3 OP1 C A1581 97.821 204.337 54.799 1.00 67.59 O
ATOM 4 OP2 C A1581 98.079 203.716 57.272 1.00 66.87 O
ATOM 5 O5' C A1581 97.580 202.000 55.502 1.00 67.87 O
ATOM 6 C5' C A1581 97.693 201.438 54.184 1.00 68.35 C
ATOM 7 C4' C A1581 97.074 200.070 54.156 1.00 69.04 C
ATOM 8 O4' C A1581 97.908 199.162 54.911 1.00 69.64 O
ATOM 9 C3' C A1581 95.698 199.987 54.801 1.00 69.80 C
ATOM 10 O3' C A1581 94.683 200.281 53.839 1.00 70.70 O
ATOM 11 C2' C A1581 95.638 198.535 55.248 1.00 69.92 C
ATOM 12 O2' C A1581 95.303 197.687 54.173 1.00 70.65 O
ATOM 13 C1' C A1581 97.094 198.274 55.648 1.00 69.56 C
ATOM 14 N1 C A1581 97.374 198.475 57.078 1.00 69.64 N
ATOM 15 C2 C A1581 97.232 197.394 57.941 1.00 69.77 C
ATOM 16 O2 C A1581 96.878 196.301 57.475 1.00 68.67 O
ATOM 17 N3 C A1581 97.484 197.565 59.258 1.00 70.16 N
ATOM 18 C4 C A1581 97.865 198.759 59.717 1.00 69.67 C
ATOM 19 N4 C A1581 98.097 198.874 61.022 1.00 69.53 N
ATOM 20 C5 C A1581 98.021 199.881 58.858 1.00 69.89 C
ATOM 21 C6 C A1581 97.767 199.697 57.558 1.00 69.77 C
ATOM 22 P A A1582 93.278 200.916 54.303 1.00 71.35 P
ATOM 23 OP1 A A1582 92.643 200.062 55.333 1.00 71.99 O
ATOM 24 OP2 A A1582 92.533 201.225 53.058 1.00 70.56 O
ATOM 25 O5' A A1582 93.701 202.277 55.011 1.00 74.76 O
TER
ATOM 1 O3' C B1581 94.683 200.281 53.839 1.00 70.70 O
ATOM 2 P A B1582 93.278 200.916 54.303 1.00 71.35 P
ATOM 3 OP1 A B1582 92.643 200.062 55.333 1.00 71.99 O
ATOM 4 OP2 A B1582 92.533 201.225 53.058 1.00 70.56 O
ATOM 5 O5' A B1582 93.701 202.277 55.011 1.00 74.76 O
ATOM 6 C5' A B1582 92.707 203.238 55.419 1.00 79.57 C
ATOM 7 C4' A B1582 92.977 203.737 56.826 1.00 83.29 C
ATOM 8 O4' A B1582 92.760 202.657 57.776 1.00 83.26 O
ATOM 9 C3' A B1582 94.376 204.295 57.129 1.00 86.18 C
ATOM 10 O3' A B1582 94.281 205.347 58.092 1.00 91.05 O
ATOM 11 C2' A B1582 95.064 203.120 57.812 1.00 84.96 C
ATOM 12 O2' A B1582 96.115 203.525 58.671 1.00 83.57 O
ATOM 13 C1' A B1582 93.898 202.541 58.614 1.00 83.81 C
ATOM 14 N9 A B1582 94.085 201.141 58.983 1.00 83.04 N
ATOM 15 C8 A B1582 94.023 200.026 58.191 1.00 82.37 C
ATOM 16 N7 A B1582 94.287 198.914 58.829 1.00 81.93 N
ATOM 17 C5 A B1582 94.532 199.325 60.132 1.00 82.19 C
ATOM 18 C6 A B1582 94.891 198.624 61.298 1.00 82.15 C
ATOM 19 N6 A B1582 95.078 197.303 61.342 1.00 82.54 N
ATOM 20 N1 A B1582 95.061 199.338 62.434 1.00 82.14 N
ATOM 21 C2 A B1582 94.886 200.664 62.389 1.00 82.55 C
ATOM 22 N3 A B1582 94.558 201.435 61.355 1.00 82.99 N
ATOM 23 C4 A B1582 94.396 200.693 60.243 1.00 82.71 C
ATOM 24 P U B1583 94.983 206.762 57.808 1.00 94.16 P
ATOM 25 OP1 U B1583 95.383 206.775 56.375 1.00 93.51 O
ATOM 26 OP2 U B1583 95.997 207.059 58.859 1.00 94.16 O
ATOM 27 O5' U B1583 93.788 207.785 58.005 1.00 96.08 O
TER
Atoms:
C2: (97.232,197.394,57.941)
OP1: (97.821,204.337,54.799)
OP2: (98.079,203.716,57.272)
C4: (97.865,198.759,59.717)
O5': (97.580,202.000,55.502)
C3': (95.698,199.987,54.801)
C1': (97.094,198.274,55.648)
O4': (97.908,199.162,54.911)
C5': (97.693,201.438,54.184)
P: (98.273,203.386,55.833)
O2: (96.878,196.301,57.475)
C4': (97.074,200.070,54.156)
C2': (95.638,198.535,55.248)
O2': (95.303,197.687,54.173)
N1: (97.374,198.475,57.078)
N3: (97.484,197.565,59.258)
N4: (98.097,198.874,61.022)
C6: (97.767,199.697,57.558)
C5: (98.021,199.881,58.858)
O3': (94.683,200.281,53.839)
OP1: (97.821,204.337,54.799)
OP2: (98.079,203.716,57.272)
C4: (97.865,198.759,59.717)
O5': (97.580,202.000,55.502)
C3': (95.698,199.987,54.801)
C1': (97.094,198.274,55.648)
O4': (97.908,199.162,54.911)
C5': (97.693,201.438,54.184)
P: (98.273,203.386,55.833)
O2: (96.878,196.301,57.475)
C4': (97.074,200.070,54.156)
C2': (95.638,198.535,55.248)
O2': (95.303,197.687,54.173)
N1: (97.374,198.475,57.078)
N3: (97.484,197.565,59.258)
N4: (98.097,198.874,61.022)
C6: (97.767,199.697,57.558)
C5: (98.021,199.881,58.858)
O3': (94.683,200.281,53.839)
OP1: (92.643,200.062,55.333)
OP2: (92.533,201.225,53.058)
C3': (94.376,204.295,57.129)
C1': (93.898,202.541,58.614)
C5': (92.707,203.238,55.419)
O4': (92.760,202.657,57.776)
C8: (94.023,200.026,58.191)
O2': (96.115,203.525,58.671)
C6: (94.891,198.624,61.298)
C5: (94.532,199.325,60.132)
C4: (94.396,200.693,60.243)
P: (93.278,200.916,54.303)
C4': (92.977,203.737,56.826)
C2': (95.064,203.120,57.812)
C2: (94.886,200.664,62.389)
N1: (95.061,199.338,62.434)
N3: (94.558,201.435,61.355)
N6: (95.078,197.303,61.342)
N7: (94.287,198.914,58.829)
N9: (94.085,201.141,58.983)
O5': (93.701,202.277,55.011)
O3': (94.281,205.347,58.092)
OP2: (92.533,201.225,53.058)
C3': (94.376,204.295,57.129)
C1': (93.898,202.541,58.614)
C5': (92.707,203.238,55.419)
O4': (92.760,202.657,57.776)
C8: (94.023,200.026,58.191)
O2': (96.115,203.525,58.671)
C6: (94.891,198.624,61.298)
C5: (94.532,199.325,60.132)
C4: (94.396,200.693,60.243)
P: (93.278,200.916,54.303)
C4': (92.977,203.737,56.826)
C2': (95.064,203.120,57.812)
C2: (94.886,200.664,62.389)
N1: (95.061,199.338,62.434)
N3: (94.558,201.435,61.355)
N6: (95.078,197.303,61.342)
N7: (94.287,198.914,58.829)
N9: (94.085,201.141,58.983)
O5': (93.701,202.277,55.011)
O3': (94.281,205.347,58.092)
Image (generated by PyMOL):