Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0942:0971
Extra
PDB:
ATOM 1 O3' U A 941 55.677 70.975 108.508 1.00 43.21 O
ATOM 2 P A A 942 55.835 70.653 110.070 1.00 44.45 P
ATOM 3 OP1 A A 942 56.703 71.708 110.650 1.00 45.19 O
ATOM 4 OP2 A A 942 56.216 69.231 110.234 1.00 45.20 O
ATOM 5 O5' A A 942 54.356 70.840 110.635 1.00 44.86 O
ATOM 6 C5' A A 942 53.702 72.129 110.614 1.00 45.24 C
ATOM 7 C4' A A 942 52.374 72.052 111.331 1.00 45.22 C
ATOM 8 O4' A A 942 51.455 71.219 110.579 1.00 46.41 O
ATOM 9 C3' A A 942 52.429 71.395 112.696 1.00 45.67 C
ATOM 10 O3' A A 942 52.865 72.299 113.694 1.00 46.85 O
ATOM 11 C2' A A 942 50.997 70.911 112.887 1.00 45.93 C
ATOM 12 O2' A A 942 50.089 71.926 113.258 1.00 46.88 O
ATOM 13 C1' A A 942 50.655 70.454 111.472 1.00 45.18 C
ATOM 14 N9 A A 942 50.925 69.031 111.244 1.00 44.18 N
ATOM 15 C8 A A 942 51.924 68.458 110.490 1.00 43.43 C
ATOM 16 N7 A A 942 51.878 67.149 110.460 1.00 43.57 N
ATOM 17 C5 A A 942 50.781 66.836 111.252 1.00 43.93 C
ATOM 18 C6 A A 942 50.189 65.612 111.611 1.00 43.82 C
ATOM 19 N6 A A 942 50.630 64.421 111.206 1.00 43.62 N
ATOM 20 N1 A A 942 49.108 65.654 112.410 1.00 44.02 N
ATOM 21 C2 A A 942 48.656 66.845 112.816 1.00 44.17 C
ATOM 22 N3 A A 942 49.118 68.058 112.545 1.00 42.83 N
ATOM 23 C4 A A 942 50.193 67.985 111.748 1.00 43.24 C
ATOM 24 P G A 943 53.894 71.796 114.814 1.00 47.34 P
ATOM 25 OP1 G A 943 54.107 72.904 115.775 1.00 48.34 O
ATOM 26 OP2 G A 943 55.053 71.200 114.118 1.00 46.64 O
ATOM 27 O5' G A 943 53.112 70.617 115.542 1.00 47.59 O
TER
ATOM 1 O3' C B 970 51.897 55.522 111.631 1.00 47.45 O
ATOM 2 P A B 971 50.932 55.779 110.375 1.00 47.95 P
ATOM 3 OP1 A B 971 49.715 54.951 110.556 1.00 48.75 O
ATOM 4 OP2 A B 971 51.737 55.637 109.142 1.00 48.56 O
ATOM 5 O5' A B 971 50.504 57.300 110.533 1.00 48.31 O
ATOM 6 C5' A B 971 49.596 57.698 111.568 1.00 47.10 C
ATOM 7 C4' A B 971 49.465 59.195 111.590 1.00 47.76 C
ATOM 8 O4' A B 971 50.710 59.789 112.046 1.00 48.68 O
ATOM 9 C3' A B 971 49.256 59.832 110.235 1.00 48.31 C
ATOM 10 O3' A B 971 47.938 59.723 109.750 1.00 48.77 O
ATOM 11 C2' A B 971 49.714 61.257 110.484 1.00 49.50 C
ATOM 12 O2' A B 971 48.774 62.043 111.194 1.00 49.55 O
ATOM 13 C1' A B 971 50.956 60.993 111.334 1.00 49.19 C
ATOM 14 N9 A B 971 52.084 60.754 110.444 1.00 49.47 N
ATOM 15 C8 A B 971 52.492 59.550 109.927 1.00 51.09 C
ATOM 16 N7 A B 971 53.501 59.645 109.102 1.00 52.29 N
ATOM 17 C5 A B 971 53.788 61.003 109.084 1.00 51.15 C
ATOM 18 C6 A B 971 54.752 61.751 108.396 1.00 50.66 C
ATOM 19 N6 A B 971 55.628 61.214 107.547 1.00 51.79 N
ATOM 20 N1 A B 971 54.781 63.085 108.606 1.00 49.82 N
ATOM 21 C2 A B 971 53.888 63.618 109.448 1.00 49.44 C
ATOM 22 N3 A B 971 52.926 63.019 110.147 1.00 49.19 N
ATOM 23 C4 A B 971 52.931 61.695 109.918 1.00 50.11 C
ATOM 24 P A B 972 47.693 59.745 108.167 1.00 48.92 P
ATOM 25 OP1 A B 972 46.309 59.263 107.896 1.00 49.00 O
ATOM 26 OP2 A B 972 48.852 59.058 107.527 1.00 46.81 O
ATOM 27 O5' A B 972 47.758 61.300 107.830 1.00 46.67 O
TER
ATOM 2 P A A 942 55.835 70.653 110.070 1.00 44.45 P
ATOM 3 OP1 A A 942 56.703 71.708 110.650 1.00 45.19 O
ATOM 4 OP2 A A 942 56.216 69.231 110.234 1.00 45.20 O
ATOM 5 O5' A A 942 54.356 70.840 110.635 1.00 44.86 O
ATOM 6 C5' A A 942 53.702 72.129 110.614 1.00 45.24 C
ATOM 7 C4' A A 942 52.374 72.052 111.331 1.00 45.22 C
ATOM 8 O4' A A 942 51.455 71.219 110.579 1.00 46.41 O
ATOM 9 C3' A A 942 52.429 71.395 112.696 1.00 45.67 C
ATOM 10 O3' A A 942 52.865 72.299 113.694 1.00 46.85 O
ATOM 11 C2' A A 942 50.997 70.911 112.887 1.00 45.93 C
ATOM 12 O2' A A 942 50.089 71.926 113.258 1.00 46.88 O
ATOM 13 C1' A A 942 50.655 70.454 111.472 1.00 45.18 C
ATOM 14 N9 A A 942 50.925 69.031 111.244 1.00 44.18 N
ATOM 15 C8 A A 942 51.924 68.458 110.490 1.00 43.43 C
ATOM 16 N7 A A 942 51.878 67.149 110.460 1.00 43.57 N
ATOM 17 C5 A A 942 50.781 66.836 111.252 1.00 43.93 C
ATOM 18 C6 A A 942 50.189 65.612 111.611 1.00 43.82 C
ATOM 19 N6 A A 942 50.630 64.421 111.206 1.00 43.62 N
ATOM 20 N1 A A 942 49.108 65.654 112.410 1.00 44.02 N
ATOM 21 C2 A A 942 48.656 66.845 112.816 1.00 44.17 C
ATOM 22 N3 A A 942 49.118 68.058 112.545 1.00 42.83 N
ATOM 23 C4 A A 942 50.193 67.985 111.748 1.00 43.24 C
ATOM 24 P G A 943 53.894 71.796 114.814 1.00 47.34 P
ATOM 25 OP1 G A 943 54.107 72.904 115.775 1.00 48.34 O
ATOM 26 OP2 G A 943 55.053 71.200 114.118 1.00 46.64 O
ATOM 27 O5' G A 943 53.112 70.617 115.542 1.00 47.59 O
TER
ATOM 1 O3' C B 970 51.897 55.522 111.631 1.00 47.45 O
ATOM 2 P A B 971 50.932 55.779 110.375 1.00 47.95 P
ATOM 3 OP1 A B 971 49.715 54.951 110.556 1.00 48.75 O
ATOM 4 OP2 A B 971 51.737 55.637 109.142 1.00 48.56 O
ATOM 5 O5' A B 971 50.504 57.300 110.533 1.00 48.31 O
ATOM 6 C5' A B 971 49.596 57.698 111.568 1.00 47.10 C
ATOM 7 C4' A B 971 49.465 59.195 111.590 1.00 47.76 C
ATOM 8 O4' A B 971 50.710 59.789 112.046 1.00 48.68 O
ATOM 9 C3' A B 971 49.256 59.832 110.235 1.00 48.31 C
ATOM 10 O3' A B 971 47.938 59.723 109.750 1.00 48.77 O
ATOM 11 C2' A B 971 49.714 61.257 110.484 1.00 49.50 C
ATOM 12 O2' A B 971 48.774 62.043 111.194 1.00 49.55 O
ATOM 13 C1' A B 971 50.956 60.993 111.334 1.00 49.19 C
ATOM 14 N9 A B 971 52.084 60.754 110.444 1.00 49.47 N
ATOM 15 C8 A B 971 52.492 59.550 109.927 1.00 51.09 C
ATOM 16 N7 A B 971 53.501 59.645 109.102 1.00 52.29 N
ATOM 17 C5 A B 971 53.788 61.003 109.084 1.00 51.15 C
ATOM 18 C6 A B 971 54.752 61.751 108.396 1.00 50.66 C
ATOM 19 N6 A B 971 55.628 61.214 107.547 1.00 51.79 N
ATOM 20 N1 A B 971 54.781 63.085 108.606 1.00 49.82 N
ATOM 21 C2 A B 971 53.888 63.618 109.448 1.00 49.44 C
ATOM 22 N3 A B 971 52.926 63.019 110.147 1.00 49.19 N
ATOM 23 C4 A B 971 52.931 61.695 109.918 1.00 50.11 C
ATOM 24 P A B 972 47.693 59.745 108.167 1.00 48.92 P
ATOM 25 OP1 A B 972 46.309 59.263 107.896 1.00 49.00 O
ATOM 26 OP2 A B 972 48.852 59.058 107.527 1.00 46.81 O
ATOM 27 O5' A B 972 47.758 61.300 107.830 1.00 46.67 O
TER
Atoms:
OP1: (56.703,71.708,110.650)
OP2: (56.216,69.231,110.234)
C3': (52.429,71.395,112.696)
C1': (50.655,70.454,111.472)
C5': (53.702,72.129,110.614)
O4': (51.455,71.219,110.579)
C8: (51.924,68.458,110.490)
O2': (50.089,71.926,113.258)
C6: (50.189,65.612,111.611)
C5: (50.781,66.836,111.252)
C4: (50.193,67.985,111.748)
P: (55.835,70.653,110.070)
C4': (52.374,72.052,111.331)
C2': (50.997,70.911,112.887)
C2: (48.656,66.845,112.816)
N1: (49.108,65.654,112.410)
N3: (49.118,68.058,112.545)
N6: (50.630,64.421,111.206)
N7: (51.878,67.149,110.460)
N9: (50.925,69.031,111.244)
O5': (54.356,70.840,110.635)
O3': (52.865,72.299,113.694)
OP2: (56.216,69.231,110.234)
C3': (52.429,71.395,112.696)
C1': (50.655,70.454,111.472)
C5': (53.702,72.129,110.614)
O4': (51.455,71.219,110.579)
C8: (51.924,68.458,110.490)
O2': (50.089,71.926,113.258)
C6: (50.189,65.612,111.611)
C5: (50.781,66.836,111.252)
C4: (50.193,67.985,111.748)
P: (55.835,70.653,110.070)
C4': (52.374,72.052,111.331)
C2': (50.997,70.911,112.887)
C2: (48.656,66.845,112.816)
N1: (49.108,65.654,112.410)
N3: (49.118,68.058,112.545)
N6: (50.630,64.421,111.206)
N7: (51.878,67.149,110.460)
N9: (50.925,69.031,111.244)
O5': (54.356,70.840,110.635)
O3': (52.865,72.299,113.694)
OP1: (49.715,54.951,110.556)
OP2: (51.737,55.637,109.142)
C3': (49.256,59.832,110.235)
C1': (50.956,60.993,111.334)
C5': (49.596,57.698,111.568)
O4': (50.710,59.789,112.046)
C8: (52.492,59.550,109.927)
O2': (48.774,62.043,111.194)
C6: (54.752,61.751,108.396)
C5: (53.788,61.003,109.084)
C4: (52.931,61.695,109.918)
P: (50.932,55.779,110.375)
C4': (49.465,59.195,111.590)
C2': (49.714,61.257,110.484)
C2: (53.888,63.618,109.448)
N1: (54.781,63.085,108.606)
N3: (52.926,63.019,110.147)
N6: (55.628,61.214,107.547)
N7: (53.501,59.645,109.102)
N9: (52.084,60.754,110.444)
O5': (50.504,57.300,110.533)
O3': (47.938,59.723,109.750)
OP2: (51.737,55.637,109.142)
C3': (49.256,59.832,110.235)
C1': (50.956,60.993,111.334)
C5': (49.596,57.698,111.568)
O4': (50.710,59.789,112.046)
C8: (52.492,59.550,109.927)
O2': (48.774,62.043,111.194)
C6: (54.752,61.751,108.396)
C5: (53.788,61.003,109.084)
C4: (52.931,61.695,109.918)
P: (50.932,55.779,110.375)
C4': (49.465,59.195,111.590)
C2': (49.714,61.257,110.484)
C2: (53.888,63.618,109.448)
N1: (54.781,63.085,108.606)
N3: (52.926,63.019,110.147)
N6: (55.628,61.214,107.547)
N7: (53.501,59.645,109.102)
N9: (52.084,60.754,110.444)
O5': (50.504,57.300,110.533)
O3': (47.938,59.723,109.750)
Image (generated by PyMOL):