Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A574:A575
Extra
PDB:
ATOM 1 O3' C A 573 -10.693 84.683 116.819 1.00 69.02 O
ATOM 2 P C A 574 -10.754 85.565 115.466 1.00 67.20 P
ATOM 3 OP1 C A 574 -11.859 85.068 114.604 1.00 66.29 O
ATOM 4 OP2 C A 574 -9.385 85.653 114.912 1.00 67.61 O
ATOM 5 O5' C A 574 -11.214 86.999 115.968 1.00 64.82 O
ATOM 6 C5' C A 574 -12.571 87.212 116.382 1.00 66.00 C
ATOM 7 C4' C A 574 -12.745 88.608 116.912 1.00 66.70 C
ATOM 8 O4' C A 574 -11.888 88.789 118.062 1.00 67.39 O
ATOM 9 C3' C A 574 -12.326 89.709 115.956 1.00 67.57 C
ATOM 10 O3' C A 574 -13.366 90.010 115.047 1.00 67.32 O
ATOM 11 C2' C A 574 -12.010 90.864 116.896 1.00 68.70 C
ATOM 12 O2' C A 574 -13.152 91.578 117.331 1.00 69.55 O
ATOM 13 C1' C A 574 -11.376 90.115 118.071 1.00 69.00 C
ATOM 14 N1 C A 574 -9.903 90.055 117.987 1.00 70.23 N
ATOM 15 C2 C A 574 -9.164 91.142 118.462 1.00 70.07 C
ATOM 16 O2 C A 574 -9.766 92.130 118.916 1.00 67.70 O
ATOM 17 N3 C A 574 -7.816 91.093 118.412 1.00 71.15 N
ATOM 18 C4 C A 574 -7.202 90.019 117.906 1.00 71.71 C
ATOM 19 N4 C A 574 -5.865 90.013 117.896 1.00 72.89 N
ATOM 20 C5 C A 574 -7.928 88.904 117.397 1.00 70.73 C
ATOM 21 C6 C A 574 -9.264 88.962 117.457 1.00 70.96 C
ATOM 22 P A A 575 -13.020 90.475 113.550 1.00 69.20 P
ATOM 23 OP1 A A 575 -12.289 91.769 113.577 1.00 68.17 O
ATOM 24 OP2 A A 575 -14.260 90.347 112.755 1.00 69.81 O
ATOM 25 O5' A A 575 -12.034 89.373 112.984 1.00 68.11 O
TER
ATOM 1 O3' C B 574 -13.366 90.010 115.047 1.00 67.32 O
ATOM 2 P A B 575 -13.020 90.475 113.550 1.00 69.20 P
ATOM 3 OP1 A B 575 -12.289 91.769 113.577 1.00 68.17 O
ATOM 4 OP2 A B 575 -14.260 90.347 112.755 1.00 69.81 O
ATOM 5 O5' A B 575 -12.034 89.373 112.984 1.00 68.11 O
ATOM 6 C5' A B 575 -11.900 89.227 111.577 1.00 69.37 C
ATOM 7 C4' A B 575 -10.459 89.054 111.204 1.00 70.77 C
ATOM 8 O4' A B 575 -9.675 90.190 111.676 1.00 72.10 O
ATOM 9 C3' A B 575 -9.793 87.818 111.781 1.00 70.64 C
ATOM 10 O3' A B 575 -8.938 87.318 110.781 1.00 70.19 O
ATOM 11 C2' A B 575 -9.028 88.369 112.985 1.00 71.29 C
ATOM 12 O2' A B 575 -7.892 87.625 113.356 1.00 70.11 O
ATOM 13 C1' A B 575 -8.586 89.722 112.455 1.00 72.13 C
ATOM 14 N9 A B 575 -8.286 90.701 113.498 1.00 73.53 N
ATOM 15 C8 A B 575 -9.160 91.487 114.212 1.00 74.24 C
ATOM 16 N7 A B 575 -8.572 92.306 115.051 1.00 74.41 N
ATOM 17 C5 A B 575 -7.219 92.033 114.889 1.00 74.45 C
ATOM 18 C6 A B 575 -6.066 92.568 115.495 1.00 73.99 C
ATOM 19 N6 A B 575 -6.096 93.523 116.424 1.00 73.28 N
ATOM 20 N1 A B 575 -4.869 92.079 115.107 1.00 73.87 N
ATOM 21 C2 A B 575 -4.841 91.113 114.180 1.00 74.14 C
ATOM 22 N3 A B 575 -5.851 90.525 113.540 1.00 74.56 N
ATOM 23 C4 A B 575 -7.030 91.038 113.943 1.00 74.35 C
ATOM 24 P G B 576 -9.273 85.910 110.091 1.00 72.92 P
ATOM 25 OP1 G B 576 -10.742 85.745 109.934 1.00 73.77 O
ATOM 26 OP2 G B 576 -8.502 84.882 110.834 1.00 72.71 O
ATOM 27 O5' G B 576 -8.667 86.068 108.626 1.00 72.08 O
TER
ATOM 2 P C A 574 -10.754 85.565 115.466 1.00 67.20 P
ATOM 3 OP1 C A 574 -11.859 85.068 114.604 1.00 66.29 O
ATOM 4 OP2 C A 574 -9.385 85.653 114.912 1.00 67.61 O
ATOM 5 O5' C A 574 -11.214 86.999 115.968 1.00 64.82 O
ATOM 6 C5' C A 574 -12.571 87.212 116.382 1.00 66.00 C
ATOM 7 C4' C A 574 -12.745 88.608 116.912 1.00 66.70 C
ATOM 8 O4' C A 574 -11.888 88.789 118.062 1.00 67.39 O
ATOM 9 C3' C A 574 -12.326 89.709 115.956 1.00 67.57 C
ATOM 10 O3' C A 574 -13.366 90.010 115.047 1.00 67.32 O
ATOM 11 C2' C A 574 -12.010 90.864 116.896 1.00 68.70 C
ATOM 12 O2' C A 574 -13.152 91.578 117.331 1.00 69.55 O
ATOM 13 C1' C A 574 -11.376 90.115 118.071 1.00 69.00 C
ATOM 14 N1 C A 574 -9.903 90.055 117.987 1.00 70.23 N
ATOM 15 C2 C A 574 -9.164 91.142 118.462 1.00 70.07 C
ATOM 16 O2 C A 574 -9.766 92.130 118.916 1.00 67.70 O
ATOM 17 N3 C A 574 -7.816 91.093 118.412 1.00 71.15 N
ATOM 18 C4 C A 574 -7.202 90.019 117.906 1.00 71.71 C
ATOM 19 N4 C A 574 -5.865 90.013 117.896 1.00 72.89 N
ATOM 20 C5 C A 574 -7.928 88.904 117.397 1.00 70.73 C
ATOM 21 C6 C A 574 -9.264 88.962 117.457 1.00 70.96 C
ATOM 22 P A A 575 -13.020 90.475 113.550 1.00 69.20 P
ATOM 23 OP1 A A 575 -12.289 91.769 113.577 1.00 68.17 O
ATOM 24 OP2 A A 575 -14.260 90.347 112.755 1.00 69.81 O
ATOM 25 O5' A A 575 -12.034 89.373 112.984 1.00 68.11 O
TER
ATOM 1 O3' C B 574 -13.366 90.010 115.047 1.00 67.32 O
ATOM 2 P A B 575 -13.020 90.475 113.550 1.00 69.20 P
ATOM 3 OP1 A B 575 -12.289 91.769 113.577 1.00 68.17 O
ATOM 4 OP2 A B 575 -14.260 90.347 112.755 1.00 69.81 O
ATOM 5 O5' A B 575 -12.034 89.373 112.984 1.00 68.11 O
ATOM 6 C5' A B 575 -11.900 89.227 111.577 1.00 69.37 C
ATOM 7 C4' A B 575 -10.459 89.054 111.204 1.00 70.77 C
ATOM 8 O4' A B 575 -9.675 90.190 111.676 1.00 72.10 O
ATOM 9 C3' A B 575 -9.793 87.818 111.781 1.00 70.64 C
ATOM 10 O3' A B 575 -8.938 87.318 110.781 1.00 70.19 O
ATOM 11 C2' A B 575 -9.028 88.369 112.985 1.00 71.29 C
ATOM 12 O2' A B 575 -7.892 87.625 113.356 1.00 70.11 O
ATOM 13 C1' A B 575 -8.586 89.722 112.455 1.00 72.13 C
ATOM 14 N9 A B 575 -8.286 90.701 113.498 1.00 73.53 N
ATOM 15 C8 A B 575 -9.160 91.487 114.212 1.00 74.24 C
ATOM 16 N7 A B 575 -8.572 92.306 115.051 1.00 74.41 N
ATOM 17 C5 A B 575 -7.219 92.033 114.889 1.00 74.45 C
ATOM 18 C6 A B 575 -6.066 92.568 115.495 1.00 73.99 C
ATOM 19 N6 A B 575 -6.096 93.523 116.424 1.00 73.28 N
ATOM 20 N1 A B 575 -4.869 92.079 115.107 1.00 73.87 N
ATOM 21 C2 A B 575 -4.841 91.113 114.180 1.00 74.14 C
ATOM 22 N3 A B 575 -5.851 90.525 113.540 1.00 74.56 N
ATOM 23 C4 A B 575 -7.030 91.038 113.943 1.00 74.35 C
ATOM 24 P G B 576 -9.273 85.910 110.091 1.00 72.92 P
ATOM 25 OP1 G B 576 -10.742 85.745 109.934 1.00 73.77 O
ATOM 26 OP2 G B 576 -8.502 84.882 110.834 1.00 72.71 O
ATOM 27 O5' G B 576 -8.667 86.068 108.626 1.00 72.08 O
TER
Atoms:
C2: (-9.164,91.142,118.462)
OP1: (-11.859,85.068,114.604)
OP2: (-9.385,85.653,114.912)
C4: (-7.202,90.019,117.906)
O5': (-11.214,86.999,115.968)
C3': (-12.326,89.709,115.956)
C1': (-11.376,90.115,118.071)
O4': (-11.888,88.789,118.062)
C5': (-12.571,87.212,116.382)
P: (-10.754,85.565,115.466)
O2: (-9.766,92.130,118.916)
C4': (-12.745,88.608,116.912)
C2': (-12.010,90.864,116.896)
O2': (-13.152,91.578,117.331)
N1: (-9.903,90.055,117.987)
N3: (-7.816,91.093,118.412)
N4: (-5.865,90.013,117.896)
C6: (-9.264,88.962,117.457)
C5: (-7.928,88.904,117.397)
O3': (-13.366,90.010,115.047)
OP1: (-11.859,85.068,114.604)
OP2: (-9.385,85.653,114.912)
C4: (-7.202,90.019,117.906)
O5': (-11.214,86.999,115.968)
C3': (-12.326,89.709,115.956)
C1': (-11.376,90.115,118.071)
O4': (-11.888,88.789,118.062)
C5': (-12.571,87.212,116.382)
P: (-10.754,85.565,115.466)
O2: (-9.766,92.130,118.916)
C4': (-12.745,88.608,116.912)
C2': (-12.010,90.864,116.896)
O2': (-13.152,91.578,117.331)
N1: (-9.903,90.055,117.987)
N3: (-7.816,91.093,118.412)
N4: (-5.865,90.013,117.896)
C6: (-9.264,88.962,117.457)
C5: (-7.928,88.904,117.397)
O3': (-13.366,90.010,115.047)
OP1: (-12.289,91.769,113.577)
OP2: (-14.260,90.347,112.755)
C3': (-9.793,87.818,111.781)
C1': (-8.586,89.722,112.455)
C5': (-11.900,89.227,111.577)
O4': (-9.675,90.190,111.676)
C8: (-9.160,91.487,114.212)
O2': (-7.892,87.625,113.356)
C6: (-6.066,92.568,115.495)
C5: (-7.219,92.033,114.889)
C4: (-7.030,91.038,113.943)
P: (-13.020,90.475,113.550)
C4': (-10.459,89.054,111.204)
C2': (-9.028,88.369,112.985)
C2: (-4.841,91.113,114.180)
N1: (-4.869,92.079,115.107)
N3: (-5.851,90.525,113.540)
N6: (-6.096,93.523,116.424)
N7: (-8.572,92.306,115.051)
N9: (-8.286,90.701,113.498)
O5': (-12.034,89.373,112.984)
O3': (-8.938,87.318,110.781)
OP2: (-14.260,90.347,112.755)
C3': (-9.793,87.818,111.781)
C1': (-8.586,89.722,112.455)
C5': (-11.900,89.227,111.577)
O4': (-9.675,90.190,111.676)
C8: (-9.160,91.487,114.212)
O2': (-7.892,87.625,113.356)
C6: (-6.066,92.568,115.495)
C5: (-7.219,92.033,114.889)
C4: (-7.030,91.038,113.943)
P: (-13.020,90.475,113.550)
C4': (-10.459,89.054,111.204)
C2': (-9.028,88.369,112.985)
C2: (-4.841,91.113,114.180)
N1: (-4.869,92.079,115.107)
N3: (-5.851,90.525,113.540)
N6: (-6.096,93.523,116.424)
N7: (-8.572,92.306,115.051)
N9: (-8.286,90.701,113.498)
O5': (-12.034,89.373,112.984)
O3': (-8.938,87.318,110.781)
Image (generated by PyMOL):