Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A2509:A2534
Extra
PDB:
ATOM 1 O3' A A2508 -64.436 98.196 173.542 1.00 0.01 O
ATOM 2 P C A2509 -65.141 96.783 173.757 1.00 0.05 P
ATOM 3 OP1 C A2509 -66.457 97.029 174.414 1.00 0.05 O
ATOM 4 OP2 C A2509 -64.147 95.902 174.431 1.00 0.05 O
ATOM 5 O5' C A2509 -65.362 96.286 172.270 1.00 0.05 O
ATOM 6 C5' C A2509 -65.935 97.127 171.284 1.00 0.05 C
ATOM 7 C4' C A2509 -66.095 96.377 170.000 1.00 0.05 C
ATOM 8 O4' C A2509 -64.789 96.239 169.371 1.00 0.05 O
ATOM 9 C3' C A2509 -66.625 94.958 170.174 1.00 0.05 C
ATOM 10 O3' C A2509 -67.422 94.603 169.064 1.00 0.05 O
ATOM 11 C2' C A2509 -65.362 94.112 170.174 1.00 0.05 C
ATOM 12 O2' C A2509 -65.544 92.772 169.774 1.00 0.05 O
ATOM 13 C1' C A2509 -64.490 94.864 169.191 1.00 0.05 C
ATOM 14 N1 C A2509 -63.064 94.656 169.424 1.00 0.09 N
ATOM 15 C2 C A2509 -62.268 94.598 168.322 1.00 0.09 C
ATOM 16 O2 C A2509 -62.843 94.779 167.248 1.00 0.09 O
ATOM 17 N3 C A2509 -60.946 94.386 168.448 1.00 0.09 N
ATOM 18 C4 C A2509 -60.442 94.230 169.651 1.00 0.09 C
ATOM 19 N4 C A2509 -59.135 94.027 169.748 1.00 0.09 N
ATOM 20 C5 C A2509 -61.238 94.261 170.817 1.00 0.09 C
ATOM 21 C6 C A2509 -62.540 94.467 170.659 1.00 0.09 C
ATOM 22 P A A2510 -69.002 94.596 169.199 1.00 0.01 P
ATOM 23 OP1 A A2510 -69.387 95.901 169.722 1.00 0.01 O
ATOM 24 OP2 A A2510 -69.390 93.396 169.950 1.00 0.01 O
ATOM 25 O5' A A2510 -69.445 94.472 167.704 1.00 0.01 O
TER
ATOM 1 O3' A B2533 -65.816 87.603 175.306 1.00 3.06 O
ATOM 2 P A B2534 -65.159 89.055 175.404 1.00 5.56 P
ATOM 3 OP1 A B2534 -64.659 89.220 176.795 1.00 5.56 O
ATOM 4 OP2 A B2534 -66.157 90.021 174.884 1.00 5.56 O
ATOM 5 O5' A B2534 -63.929 88.955 174.409 1.00 5.56 O
ATOM 6 C5' A B2534 -62.886 88.028 174.662 1.00 5.56 C
ATOM 7 C4' A B2534 -61.526 88.643 174.461 1.00 5.56 C
ATOM 8 O4' A B2534 -61.384 89.062 173.075 1.00 5.56 O
ATOM 9 C3' A B2534 -61.226 89.871 175.297 1.00 5.56 C
ATOM 10 O3' A B2534 -59.816 89.936 175.485 1.00 5.56 O
ATOM 11 C2' A B2534 -61.645 91.001 174.360 1.00 5.56 C
ATOM 12 O2' A B2534 -61.048 92.253 174.647 1.00 5.56 O
ATOM 13 C1' A B2534 -61.155 90.454 173.026 1.00 5.56 C
ATOM 14 N9 A B2534 -61.834 90.989 171.845 1.00 5.34 N
ATOM 15 C8 A B2534 -63.037 91.605 171.671 1.00 5.34 C
ATOM 16 N7 A B2534 -63.276 91.910 170.420 1.00 5.34 N
ATOM 17 C5 A B2534 -62.167 91.461 169.735 1.00 5.34 C
ATOM 18 C6 A B2534 -61.785 91.461 168.386 1.00 5.34 C
ATOM 19 N6 A B2534 -62.511 91.965 167.391 1.00 5.34 N
ATOM 20 N1 A B2534 -60.605 90.921 168.052 1.00 5.34 N
ATOM 21 C2 A B2534 -59.856 90.402 169.005 1.00 5.34 C
ATOM 22 N3 A B2534 -60.112 90.336 170.300 1.00 5.34 N
ATOM 23 C4 A B2534 -61.285 90.896 170.602 1.00 5.34 C
ATOM 24 P G B2535 -59.112 89.613 176.901 1.00 2.40 P
ATOM 25 OP1 G B2535 -60.007 90.143 178.009 1.00 2.40 O
ATOM 26 OP2 G B2535 -57.709 90.139 176.788 1.00 2.40 O
ATOM 27 O5' G B2535 -59.081 88.039 176.937 1.00 2.40 O
TER
ATOM 2 P C A2509 -65.141 96.783 173.757 1.00 0.05 P
ATOM 3 OP1 C A2509 -66.457 97.029 174.414 1.00 0.05 O
ATOM 4 OP2 C A2509 -64.147 95.902 174.431 1.00 0.05 O
ATOM 5 O5' C A2509 -65.362 96.286 172.270 1.00 0.05 O
ATOM 6 C5' C A2509 -65.935 97.127 171.284 1.00 0.05 C
ATOM 7 C4' C A2509 -66.095 96.377 170.000 1.00 0.05 C
ATOM 8 O4' C A2509 -64.789 96.239 169.371 1.00 0.05 O
ATOM 9 C3' C A2509 -66.625 94.958 170.174 1.00 0.05 C
ATOM 10 O3' C A2509 -67.422 94.603 169.064 1.00 0.05 O
ATOM 11 C2' C A2509 -65.362 94.112 170.174 1.00 0.05 C
ATOM 12 O2' C A2509 -65.544 92.772 169.774 1.00 0.05 O
ATOM 13 C1' C A2509 -64.490 94.864 169.191 1.00 0.05 C
ATOM 14 N1 C A2509 -63.064 94.656 169.424 1.00 0.09 N
ATOM 15 C2 C A2509 -62.268 94.598 168.322 1.00 0.09 C
ATOM 16 O2 C A2509 -62.843 94.779 167.248 1.00 0.09 O
ATOM 17 N3 C A2509 -60.946 94.386 168.448 1.00 0.09 N
ATOM 18 C4 C A2509 -60.442 94.230 169.651 1.00 0.09 C
ATOM 19 N4 C A2509 -59.135 94.027 169.748 1.00 0.09 N
ATOM 20 C5 C A2509 -61.238 94.261 170.817 1.00 0.09 C
ATOM 21 C6 C A2509 -62.540 94.467 170.659 1.00 0.09 C
ATOM 22 P A A2510 -69.002 94.596 169.199 1.00 0.01 P
ATOM 23 OP1 A A2510 -69.387 95.901 169.722 1.00 0.01 O
ATOM 24 OP2 A A2510 -69.390 93.396 169.950 1.00 0.01 O
ATOM 25 O5' A A2510 -69.445 94.472 167.704 1.00 0.01 O
TER
ATOM 1 O3' A B2533 -65.816 87.603 175.306 1.00 3.06 O
ATOM 2 P A B2534 -65.159 89.055 175.404 1.00 5.56 P
ATOM 3 OP1 A B2534 -64.659 89.220 176.795 1.00 5.56 O
ATOM 4 OP2 A B2534 -66.157 90.021 174.884 1.00 5.56 O
ATOM 5 O5' A B2534 -63.929 88.955 174.409 1.00 5.56 O
ATOM 6 C5' A B2534 -62.886 88.028 174.662 1.00 5.56 C
ATOM 7 C4' A B2534 -61.526 88.643 174.461 1.00 5.56 C
ATOM 8 O4' A B2534 -61.384 89.062 173.075 1.00 5.56 O
ATOM 9 C3' A B2534 -61.226 89.871 175.297 1.00 5.56 C
ATOM 10 O3' A B2534 -59.816 89.936 175.485 1.00 5.56 O
ATOM 11 C2' A B2534 -61.645 91.001 174.360 1.00 5.56 C
ATOM 12 O2' A B2534 -61.048 92.253 174.647 1.00 5.56 O
ATOM 13 C1' A B2534 -61.155 90.454 173.026 1.00 5.56 C
ATOM 14 N9 A B2534 -61.834 90.989 171.845 1.00 5.34 N
ATOM 15 C8 A B2534 -63.037 91.605 171.671 1.00 5.34 C
ATOM 16 N7 A B2534 -63.276 91.910 170.420 1.00 5.34 N
ATOM 17 C5 A B2534 -62.167 91.461 169.735 1.00 5.34 C
ATOM 18 C6 A B2534 -61.785 91.461 168.386 1.00 5.34 C
ATOM 19 N6 A B2534 -62.511 91.965 167.391 1.00 5.34 N
ATOM 20 N1 A B2534 -60.605 90.921 168.052 1.00 5.34 N
ATOM 21 C2 A B2534 -59.856 90.402 169.005 1.00 5.34 C
ATOM 22 N3 A B2534 -60.112 90.336 170.300 1.00 5.34 N
ATOM 23 C4 A B2534 -61.285 90.896 170.602 1.00 5.34 C
ATOM 24 P G B2535 -59.112 89.613 176.901 1.00 2.40 P
ATOM 25 OP1 G B2535 -60.007 90.143 178.009 1.00 2.40 O
ATOM 26 OP2 G B2535 -57.709 90.139 176.788 1.00 2.40 O
ATOM 27 O5' G B2535 -59.081 88.039 176.937 1.00 2.40 O
TER
Atoms:
C2: (-62.268,94.598,168.322)
OP1: (-66.457,97.029,174.414)
OP2: (-64.147,95.902,174.431)
C4: (-60.442,94.230,169.651)
O5': (-65.362,96.286,172.270)
C3': (-66.625,94.958,170.174)
C1': (-64.490,94.864,169.191)
O4': (-64.789,96.239,169.371)
C5': (-65.935,97.127,171.284)
P: (-65.141,96.783,173.757)
O2: (-62.843,94.779,167.248)
C4': (-66.095,96.377,170.000)
C2': (-65.362,94.112,170.174)
O2': (-65.544,92.772,169.774)
N1: (-63.064,94.656,169.424)
N3: (-60.946,94.386,168.448)
N4: (-59.135,94.027,169.748)
C6: (-62.540,94.467,170.659)
C5: (-61.238,94.261,170.817)
O3': (-67.422,94.603,169.064)
OP1: (-66.457,97.029,174.414)
OP2: (-64.147,95.902,174.431)
C4: (-60.442,94.230,169.651)
O5': (-65.362,96.286,172.270)
C3': (-66.625,94.958,170.174)
C1': (-64.490,94.864,169.191)
O4': (-64.789,96.239,169.371)
C5': (-65.935,97.127,171.284)
P: (-65.141,96.783,173.757)
O2: (-62.843,94.779,167.248)
C4': (-66.095,96.377,170.000)
C2': (-65.362,94.112,170.174)
O2': (-65.544,92.772,169.774)
N1: (-63.064,94.656,169.424)
N3: (-60.946,94.386,168.448)
N4: (-59.135,94.027,169.748)
C6: (-62.540,94.467,170.659)
C5: (-61.238,94.261,170.817)
O3': (-67.422,94.603,169.064)
OP1: (-64.659,89.220,176.795)
OP2: (-66.157,90.021,174.884)
C3': (-61.226,89.871,175.297)
C1': (-61.155,90.454,173.026)
C5': (-62.886,88.028,174.662)
O4': (-61.384,89.062,173.075)
C8: (-63.037,91.605,171.671)
O2': (-61.048,92.253,174.647)
C6: (-61.785,91.461,168.386)
C5: (-62.167,91.461,169.735)
C4: (-61.285,90.896,170.602)
P: (-65.159,89.055,175.404)
C4': (-61.526,88.643,174.461)
C2': (-61.645,91.001,174.360)
C2: (-59.856,90.402,169.005)
N1: (-60.605,90.921,168.052)
N3: (-60.112,90.336,170.300)
N6: (-62.511,91.965,167.391)
N7: (-63.276,91.910,170.420)
N9: (-61.834,90.989,171.845)
O5': (-63.929,88.955,174.409)
O3': (-59.816,89.936,175.485)
OP2: (-66.157,90.021,174.884)
C3': (-61.226,89.871,175.297)
C1': (-61.155,90.454,173.026)
C5': (-62.886,88.028,174.662)
O4': (-61.384,89.062,173.075)
C8: (-63.037,91.605,171.671)
O2': (-61.048,92.253,174.647)
C6: (-61.785,91.461,168.386)
C5: (-62.167,91.461,169.735)
C4: (-61.285,90.896,170.602)
P: (-65.159,89.055,175.404)
C4': (-61.526,88.643,174.461)
C2': (-61.645,91.001,174.360)
C2: (-59.856,90.402,169.005)
N1: (-60.605,90.921,168.052)
N3: (-60.112,90.336,170.300)
N6: (-62.511,91.965,167.391)
N7: (-63.276,91.910,170.420)
N9: (-61.834,90.989,171.845)
O5': (-63.929,88.955,174.409)
O3': (-59.816,89.936,175.485)
Image (generated by PyMOL):