Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0156:0153
Extra
PDB:
ATOM 1 O3' A A 155 72.507 103.872 69.287 1.00 37.85 O
ATOM 2 P C A 156 72.725 104.292 67.750 1.00 37.24 P
ATOM 3 OP1 C A 156 72.770 105.777 67.714 1.00 35.25 O
ATOM 4 OP2 C A 156 71.745 103.566 66.905 1.00 34.66 O
ATOM 5 O5' C A 156 74.165 103.724 67.382 1.00 33.66 O
ATOM 6 C5' C A 156 75.334 104.094 68.120 1.00 32.12 C
ATOM 7 C4' C A 156 76.498 103.286 67.628 1.00 33.82 C
ATOM 8 O4' C A 156 76.283 101.900 67.986 1.00 35.70 O
ATOM 9 C3' C A 156 76.607 103.277 66.115 1.00 36.65 C
ATOM 10 O3' C A 156 77.342 104.397 65.640 1.00 37.91 O
ATOM 11 C2' C A 156 77.267 101.939 65.829 1.00 38.06 C
ATOM 12 O2' C A 156 78.667 101.977 66.002 1.00 40.33 O
ATOM 13 C1' C A 156 76.616 101.057 66.898 1.00 37.71 C
ATOM 14 N1 C A 156 75.377 100.388 66.447 1.00 40.49 N
ATOM 15 C2 C A 156 75.477 99.222 65.698 1.00 41.60 C
ATOM 16 O2 C A 156 76.601 98.778 65.435 1.00 44.52 O
ATOM 17 N3 C A 156 74.349 98.603 65.278 1.00 41.20 N
ATOM 18 C4 C A 156 73.157 99.110 65.588 1.00 41.63 C
ATOM 19 N4 C A 156 72.074 98.463 65.163 1.00 41.64 N
ATOM 20 C5 C A 156 73.022 100.301 66.352 1.00 41.59 C
ATOM 21 C6 C A 156 74.145 100.901 66.757 1.00 42.56 C
ATOM 22 P A A 157 77.290 104.782 64.085 1.00 38.03 P
ATOM 23 OP1 A A 157 77.712 106.191 63.981 1.00 37.02 O
ATOM 24 OP2 A A 157 75.978 104.379 63.528 1.00 40.23 O
ATOM 25 O5' A A 157 78.391 103.832 63.446 1.00 35.76 O
TER
ATOM 1 O3' G B 152 64.647 102.411 63.739 1.00 34.95 O
ATOM 2 P A B 153 65.220 101.750 65.076 1.00 35.26 P
ATOM 3 OP1 A B 153 64.133 101.048 65.794 1.00 32.75 O
ATOM 4 OP2 A B 153 65.959 102.838 65.753 1.00 36.28 O
ATOM 5 O5' A B 153 66.263 100.673 64.539 1.00 33.53 O
ATOM 6 C5' A B 153 65.845 99.635 63.636 1.00 33.63 C
ATOM 7 C4' A B 153 67.027 98.807 63.179 1.00 34.17 C
ATOM 8 O4' A B 153 67.925 99.624 62.391 1.00 34.99 O
ATOM 9 C3' A B 153 67.903 98.184 64.254 1.00 34.00 C
ATOM 10 O3' A B 153 67.297 96.970 64.715 1.00 33.38 O
ATOM 11 C2' A B 153 69.219 97.971 63.508 1.00 34.58 C
ATOM 12 O2' A B 153 69.212 96.830 62.672 1.00 37.17 O
ATOM 13 C1' A B 153 69.260 99.204 62.604 1.00 35.66 C
ATOM 14 N9 A B 153 70.020 100.328 63.152 1.00 37.70 N
ATOM 15 C8 A B 153 69.588 101.323 64.000 1.00 39.31 C
ATOM 16 N7 A B 153 70.523 102.179 64.329 1.00 39.32 N
ATOM 17 C5 A B 153 71.647 101.722 63.651 1.00 38.99 C
ATOM 18 C6 A B 153 72.980 102.180 63.599 1.00 37.83 C
ATOM 19 N6 A B 153 73.430 103.234 64.274 1.00 39.90 N
ATOM 20 N1 A B 153 73.845 101.500 62.829 1.00 37.04 N
ATOM 21 C2 A B 153 73.406 100.430 62.166 1.00 38.32 C
ATOM 22 N3 A B 153 72.189 99.893 62.138 1.00 38.39 N
ATOM 23 C4 A B 153 71.347 100.593 62.913 1.00 38.03 C
ATOM 24 P A B 154 68.015 96.060 65.841 1.00 37.32 P
ATOM 25 OP1 A B 154 69.462 95.873 65.523 1.00 34.16 O
ATOM 26 OP2 A B 154 67.140 94.860 65.991 1.00 36.20 O
ATOM 27 O5' A B 154 67.919 96.912 67.183 1.00 33.89 O
TER
ATOM 2 P C A 156 72.725 104.292 67.750 1.00 37.24 P
ATOM 3 OP1 C A 156 72.770 105.777 67.714 1.00 35.25 O
ATOM 4 OP2 C A 156 71.745 103.566 66.905 1.00 34.66 O
ATOM 5 O5' C A 156 74.165 103.724 67.382 1.00 33.66 O
ATOM 6 C5' C A 156 75.334 104.094 68.120 1.00 32.12 C
ATOM 7 C4' C A 156 76.498 103.286 67.628 1.00 33.82 C
ATOM 8 O4' C A 156 76.283 101.900 67.986 1.00 35.70 O
ATOM 9 C3' C A 156 76.607 103.277 66.115 1.00 36.65 C
ATOM 10 O3' C A 156 77.342 104.397 65.640 1.00 37.91 O
ATOM 11 C2' C A 156 77.267 101.939 65.829 1.00 38.06 C
ATOM 12 O2' C A 156 78.667 101.977 66.002 1.00 40.33 O
ATOM 13 C1' C A 156 76.616 101.057 66.898 1.00 37.71 C
ATOM 14 N1 C A 156 75.377 100.388 66.447 1.00 40.49 N
ATOM 15 C2 C A 156 75.477 99.222 65.698 1.00 41.60 C
ATOM 16 O2 C A 156 76.601 98.778 65.435 1.00 44.52 O
ATOM 17 N3 C A 156 74.349 98.603 65.278 1.00 41.20 N
ATOM 18 C4 C A 156 73.157 99.110 65.588 1.00 41.63 C
ATOM 19 N4 C A 156 72.074 98.463 65.163 1.00 41.64 N
ATOM 20 C5 C A 156 73.022 100.301 66.352 1.00 41.59 C
ATOM 21 C6 C A 156 74.145 100.901 66.757 1.00 42.56 C
ATOM 22 P A A 157 77.290 104.782 64.085 1.00 38.03 P
ATOM 23 OP1 A A 157 77.712 106.191 63.981 1.00 37.02 O
ATOM 24 OP2 A A 157 75.978 104.379 63.528 1.00 40.23 O
ATOM 25 O5' A A 157 78.391 103.832 63.446 1.00 35.76 O
TER
ATOM 1 O3' G B 152 64.647 102.411 63.739 1.00 34.95 O
ATOM 2 P A B 153 65.220 101.750 65.076 1.00 35.26 P
ATOM 3 OP1 A B 153 64.133 101.048 65.794 1.00 32.75 O
ATOM 4 OP2 A B 153 65.959 102.838 65.753 1.00 36.28 O
ATOM 5 O5' A B 153 66.263 100.673 64.539 1.00 33.53 O
ATOM 6 C5' A B 153 65.845 99.635 63.636 1.00 33.63 C
ATOM 7 C4' A B 153 67.027 98.807 63.179 1.00 34.17 C
ATOM 8 O4' A B 153 67.925 99.624 62.391 1.00 34.99 O
ATOM 9 C3' A B 153 67.903 98.184 64.254 1.00 34.00 C
ATOM 10 O3' A B 153 67.297 96.970 64.715 1.00 33.38 O
ATOM 11 C2' A B 153 69.219 97.971 63.508 1.00 34.58 C
ATOM 12 O2' A B 153 69.212 96.830 62.672 1.00 37.17 O
ATOM 13 C1' A B 153 69.260 99.204 62.604 1.00 35.66 C
ATOM 14 N9 A B 153 70.020 100.328 63.152 1.00 37.70 N
ATOM 15 C8 A B 153 69.588 101.323 64.000 1.00 39.31 C
ATOM 16 N7 A B 153 70.523 102.179 64.329 1.00 39.32 N
ATOM 17 C5 A B 153 71.647 101.722 63.651 1.00 38.99 C
ATOM 18 C6 A B 153 72.980 102.180 63.599 1.00 37.83 C
ATOM 19 N6 A B 153 73.430 103.234 64.274 1.00 39.90 N
ATOM 20 N1 A B 153 73.845 101.500 62.829 1.00 37.04 N
ATOM 21 C2 A B 153 73.406 100.430 62.166 1.00 38.32 C
ATOM 22 N3 A B 153 72.189 99.893 62.138 1.00 38.39 N
ATOM 23 C4 A B 153 71.347 100.593 62.913 1.00 38.03 C
ATOM 24 P A B 154 68.015 96.060 65.841 1.00 37.32 P
ATOM 25 OP1 A B 154 69.462 95.873 65.523 1.00 34.16 O
ATOM 26 OP2 A B 154 67.140 94.860 65.991 1.00 36.20 O
ATOM 27 O5' A B 154 67.919 96.912 67.183 1.00 33.89 O
TER
Atoms:
C2: (75.477,99.222,65.698)
OP1: (72.770,105.777,67.714)
OP2: (71.745,103.566,66.905)
C4: (73.157,99.110,65.588)
O5': (74.165,103.724,67.382)
C3': (76.607,103.277,66.115)
C1': (76.616,101.057,66.898)
O4': (76.283,101.900,67.986)
C5': (75.334,104.094,68.120)
P: (72.725,104.292,67.750)
O2: (76.601,98.778,65.435)
C4': (76.498,103.286,67.628)
C2': (77.267,101.939,65.829)
O2': (78.667,101.977,66.002)
N1: (75.377,100.388,66.447)
N3: (74.349,98.603,65.278)
N4: (72.074,98.463,65.163)
C6: (74.145,100.901,66.757)
C5: (73.022,100.301,66.352)
O3': (77.342,104.397,65.640)
OP1: (72.770,105.777,67.714)
OP2: (71.745,103.566,66.905)
C4: (73.157,99.110,65.588)
O5': (74.165,103.724,67.382)
C3': (76.607,103.277,66.115)
C1': (76.616,101.057,66.898)
O4': (76.283,101.900,67.986)
C5': (75.334,104.094,68.120)
P: (72.725,104.292,67.750)
O2: (76.601,98.778,65.435)
C4': (76.498,103.286,67.628)
C2': (77.267,101.939,65.829)
O2': (78.667,101.977,66.002)
N1: (75.377,100.388,66.447)
N3: (74.349,98.603,65.278)
N4: (72.074,98.463,65.163)
C6: (74.145,100.901,66.757)
C5: (73.022,100.301,66.352)
O3': (77.342,104.397,65.640)
OP1: (64.133,101.048,65.794)
OP2: (65.959,102.838,65.753)
C3': (67.903,98.184,64.254)
C1': (69.260,99.204,62.604)
C5': (65.845,99.635,63.636)
O4': (67.925,99.624,62.391)
C8: (69.588,101.323,64.000)
O2': (69.212,96.830,62.672)
C6: (72.980,102.180,63.599)
C5: (71.647,101.722,63.651)
C4: (71.347,100.593,62.913)
P: (65.220,101.750,65.076)
C4': (67.027,98.807,63.179)
C2': (69.219,97.971,63.508)
C2: (73.406,100.430,62.166)
N1: (73.845,101.500,62.829)
N3: (72.189,99.893,62.138)
N6: (73.430,103.234,64.274)
N7: (70.523,102.179,64.329)
N9: (70.020,100.328,63.152)
O5': (66.263,100.673,64.539)
O3': (67.297,96.970,64.715)
OP2: (65.959,102.838,65.753)
C3': (67.903,98.184,64.254)
C1': (69.260,99.204,62.604)
C5': (65.845,99.635,63.636)
O4': (67.925,99.624,62.391)
C8: (69.588,101.323,64.000)
O2': (69.212,96.830,62.672)
C6: (72.980,102.180,63.599)
C5: (71.647,101.722,63.651)
C4: (71.347,100.593,62.913)
P: (65.220,101.750,65.076)
C4': (67.027,98.807,63.179)
C2': (69.219,97.971,63.508)
C2: (73.406,100.430,62.166)
N1: (73.845,101.500,62.829)
N3: (72.189,99.893,62.138)
N6: (73.430,103.234,64.274)
N7: (70.523,102.179,64.329)
N9: (70.020,100.328,63.152)
O5': (66.263,100.673,64.539)
O3': (67.297,96.970,64.715)
Image (generated by PyMOL):