Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2R8S:R95:R21
Extra
PDB:
ATOM 1 O3' A A 94 42.386 -22.725 39.674 1.00 34.78 O
ATOM 2 P C A 95 40.835 -22.699 40.036 1.00 37.00 P
ATOM 3 OP1 C A 95 40.372 -21.399 39.506 1.00 38.10 O
ATOM 4 OP2 C A 95 40.639 -23.045 41.463 1.00 33.44 O
ATOM 5 O5' C A 95 40.256 -23.889 39.155 1.00 37.79 O
ATOM 6 C5' C A 95 40.318 -23.783 37.745 1.00 38.59 C
ATOM 7 C4' C A 95 40.003 -25.108 37.087 1.00 40.04 C
ATOM 8 O4' C A 95 41.048 -26.051 37.430 1.00 38.89 O
ATOM 9 C3' C A 95 38.713 -25.786 37.526 1.00 41.63 C
ATOM 10 O3' C A 95 37.610 -25.353 36.764 1.00 40.89 O
ATOM 11 C2' C A 95 39.010 -27.233 37.197 1.00 38.63 C
ATOM 12 O2' C A 95 38.865 -27.495 35.831 1.00 38.14 O
ATOM 13 C1' C A 95 40.481 -27.351 37.544 1.00 38.80 C
ATOM 14 N1 C A 95 40.756 -27.937 38.883 1.00 37.10 N
ATOM 15 C2 C A 95 40.950 -29.328 38.978 1.00 35.01 C
ATOM 16 O2 C A 95 40.860 -30.038 37.971 1.00 34.96 O
ATOM 17 N3 C A 95 41.228 -29.872 40.178 1.00 34.41 N
ATOM 18 C4 C A 95 41.309 -29.093 41.256 1.00 33.49 C
ATOM 19 N4 C A 95 41.585 -29.689 42.426 1.00 35.08 N
ATOM 20 C5 C A 95 41.111 -27.677 41.183 1.00 35.89 C
ATOM 21 C6 C A 95 40.839 -27.140 39.986 1.00 33.58 C
ATOM 22 P A A 96 36.559 -24.300 37.329 1.00 44.13 P
ATOM 23 OP1 A A 96 37.054 -22.953 36.971 1.00 42.49 O
ATOM 24 OP2 A A 96 36.219 -24.639 38.727 1.00 37.64 O
ATOM 25 O5' A A 96 35.304 -24.659 36.401 1.00 41.70 O
TER
ATOM 1 O3' A B 20 34.607 -33.807 45.462 1.00 65.33 O
ATOM 2 P A B 21 35.676 -33.210 46.500 1.00 68.38 P
ATOM 3 OP1 A B 21 35.183 -33.533 47.853 1.00 71.10 O
ATOM 4 OP2 A B 21 35.950 -31.802 46.116 1.00 69.95 O
ATOM 5 O5' A B 21 37.000 -34.078 46.295 1.00 63.14 O
ATOM 6 C5' A B 21 38.277 -33.613 46.758 1.00 58.44 C
ATOM 7 C4' A B 21 39.328 -33.940 45.713 1.00 54.18 C
ATOM 8 O4' A B 21 38.861 -33.428 44.446 1.00 49.84 O
ATOM 9 C3' A B 21 40.717 -33.347 45.914 1.00 51.26 C
ATOM 10 O3' A B 21 41.685 -34.308 45.556 1.00 53.72 O
ATOM 11 C2' A B 21 40.786 -32.161 44.963 1.00 47.55 C
ATOM 12 O2' A B 21 42.078 -31.948 44.422 1.00 45.69 O
ATOM 13 C1' A B 21 39.832 -32.595 43.859 1.00 44.16 C
ATOM 14 N9 A B 21 39.150 -31.499 43.167 1.00 41.08 N
ATOM 15 C8 A B 21 38.752 -30.287 43.674 1.00 38.09 C
ATOM 16 N7 A B 21 38.173 -29.523 42.780 1.00 36.37 N
ATOM 17 C5 A B 21 38.181 -30.285 41.623 1.00 38.00 C
ATOM 18 C6 A B 21 37.714 -30.046 40.319 1.00 38.93 C
ATOM 19 N6 A B 21 37.112 -28.911 39.951 1.00 38.93 N
ATOM 20 N1 A B 21 37.886 -31.017 39.402 1.00 39.39 N
ATOM 21 C2 A B 21 38.479 -32.160 39.761 1.00 39.00 C
ATOM 22 N3 A B 21 38.967 -32.495 40.949 1.00 37.29 N
ATOM 23 C4 A B 21 38.779 -31.507 41.844 1.00 39.37 C
ATOM 24 P C B 22 42.454 -35.114 46.691 1.00 54.91 P
ATOM 25 OP1 C B 22 41.438 -35.614 47.642 1.00 57.30 O
ATOM 26 OP2 C B 22 43.606 -34.327 47.165 1.00 53.29 O
ATOM 27 O5' C B 22 43.011 -36.353 45.857 1.00 57.09 O
TER
ATOM 2 P C A 95 40.835 -22.699 40.036 1.00 37.00 P
ATOM 3 OP1 C A 95 40.372 -21.399 39.506 1.00 38.10 O
ATOM 4 OP2 C A 95 40.639 -23.045 41.463 1.00 33.44 O
ATOM 5 O5' C A 95 40.256 -23.889 39.155 1.00 37.79 O
ATOM 6 C5' C A 95 40.318 -23.783 37.745 1.00 38.59 C
ATOM 7 C4' C A 95 40.003 -25.108 37.087 1.00 40.04 C
ATOM 8 O4' C A 95 41.048 -26.051 37.430 1.00 38.89 O
ATOM 9 C3' C A 95 38.713 -25.786 37.526 1.00 41.63 C
ATOM 10 O3' C A 95 37.610 -25.353 36.764 1.00 40.89 O
ATOM 11 C2' C A 95 39.010 -27.233 37.197 1.00 38.63 C
ATOM 12 O2' C A 95 38.865 -27.495 35.831 1.00 38.14 O
ATOM 13 C1' C A 95 40.481 -27.351 37.544 1.00 38.80 C
ATOM 14 N1 C A 95 40.756 -27.937 38.883 1.00 37.10 N
ATOM 15 C2 C A 95 40.950 -29.328 38.978 1.00 35.01 C
ATOM 16 O2 C A 95 40.860 -30.038 37.971 1.00 34.96 O
ATOM 17 N3 C A 95 41.228 -29.872 40.178 1.00 34.41 N
ATOM 18 C4 C A 95 41.309 -29.093 41.256 1.00 33.49 C
ATOM 19 N4 C A 95 41.585 -29.689 42.426 1.00 35.08 N
ATOM 20 C5 C A 95 41.111 -27.677 41.183 1.00 35.89 C
ATOM 21 C6 C A 95 40.839 -27.140 39.986 1.00 33.58 C
ATOM 22 P A A 96 36.559 -24.300 37.329 1.00 44.13 P
ATOM 23 OP1 A A 96 37.054 -22.953 36.971 1.00 42.49 O
ATOM 24 OP2 A A 96 36.219 -24.639 38.727 1.00 37.64 O
ATOM 25 O5' A A 96 35.304 -24.659 36.401 1.00 41.70 O
TER
ATOM 1 O3' A B 20 34.607 -33.807 45.462 1.00 65.33 O
ATOM 2 P A B 21 35.676 -33.210 46.500 1.00 68.38 P
ATOM 3 OP1 A B 21 35.183 -33.533 47.853 1.00 71.10 O
ATOM 4 OP2 A B 21 35.950 -31.802 46.116 1.00 69.95 O
ATOM 5 O5' A B 21 37.000 -34.078 46.295 1.00 63.14 O
ATOM 6 C5' A B 21 38.277 -33.613 46.758 1.00 58.44 C
ATOM 7 C4' A B 21 39.328 -33.940 45.713 1.00 54.18 C
ATOM 8 O4' A B 21 38.861 -33.428 44.446 1.00 49.84 O
ATOM 9 C3' A B 21 40.717 -33.347 45.914 1.00 51.26 C
ATOM 10 O3' A B 21 41.685 -34.308 45.556 1.00 53.72 O
ATOM 11 C2' A B 21 40.786 -32.161 44.963 1.00 47.55 C
ATOM 12 O2' A B 21 42.078 -31.948 44.422 1.00 45.69 O
ATOM 13 C1' A B 21 39.832 -32.595 43.859 1.00 44.16 C
ATOM 14 N9 A B 21 39.150 -31.499 43.167 1.00 41.08 N
ATOM 15 C8 A B 21 38.752 -30.287 43.674 1.00 38.09 C
ATOM 16 N7 A B 21 38.173 -29.523 42.780 1.00 36.37 N
ATOM 17 C5 A B 21 38.181 -30.285 41.623 1.00 38.00 C
ATOM 18 C6 A B 21 37.714 -30.046 40.319 1.00 38.93 C
ATOM 19 N6 A B 21 37.112 -28.911 39.951 1.00 38.93 N
ATOM 20 N1 A B 21 37.886 -31.017 39.402 1.00 39.39 N
ATOM 21 C2 A B 21 38.479 -32.160 39.761 1.00 39.00 C
ATOM 22 N3 A B 21 38.967 -32.495 40.949 1.00 37.29 N
ATOM 23 C4 A B 21 38.779 -31.507 41.844 1.00 39.37 C
ATOM 24 P C B 22 42.454 -35.114 46.691 1.00 54.91 P
ATOM 25 OP1 C B 22 41.438 -35.614 47.642 1.00 57.30 O
ATOM 26 OP2 C B 22 43.606 -34.327 47.165 1.00 53.29 O
ATOM 27 O5' C B 22 43.011 -36.353 45.857 1.00 57.09 O
TER
Atoms:
C2: (40.950,-29.328,38.978)
OP1: (40.372,-21.399,39.506)
OP2: (40.639,-23.045,41.463)
C4: (41.309,-29.093,41.256)
O5': (40.256,-23.889,39.155)
C3': (38.713,-25.786,37.526)
C1': (40.481,-27.351,37.544)
O4': (41.048,-26.051,37.430)
C5': (40.318,-23.783,37.745)
P: (40.835,-22.699,40.036)
O2: (40.860,-30.038,37.971)
C4': (40.003,-25.108,37.087)
C2': (39.010,-27.233,37.197)
O2': (38.865,-27.495,35.831)
N1: (40.756,-27.937,38.883)
N3: (41.228,-29.872,40.178)
N4: (41.585,-29.689,42.426)
C6: (40.839,-27.140,39.986)
C5: (41.111,-27.677,41.183)
O3': (37.610,-25.353,36.764)
OP1: (40.372,-21.399,39.506)
OP2: (40.639,-23.045,41.463)
C4: (41.309,-29.093,41.256)
O5': (40.256,-23.889,39.155)
C3': (38.713,-25.786,37.526)
C1': (40.481,-27.351,37.544)
O4': (41.048,-26.051,37.430)
C5': (40.318,-23.783,37.745)
P: (40.835,-22.699,40.036)
O2: (40.860,-30.038,37.971)
C4': (40.003,-25.108,37.087)
C2': (39.010,-27.233,37.197)
O2': (38.865,-27.495,35.831)
N1: (40.756,-27.937,38.883)
N3: (41.228,-29.872,40.178)
N4: (41.585,-29.689,42.426)
C6: (40.839,-27.140,39.986)
C5: (41.111,-27.677,41.183)
O3': (37.610,-25.353,36.764)
OP1: (35.183,-33.533,47.853)
OP2: (35.950,-31.802,46.116)
C3': (40.717,-33.347,45.914)
C1': (39.832,-32.595,43.859)
C5': (38.277,-33.613,46.758)
O4': (38.861,-33.428,44.446)
C8: (38.752,-30.287,43.674)
O2': (42.078,-31.948,44.422)
C6: (37.714,-30.046,40.319)
C5: (38.181,-30.285,41.623)
C4: (38.779,-31.507,41.844)
P: (35.676,-33.210,46.500)
C4': (39.328,-33.940,45.713)
C2': (40.786,-32.161,44.963)
C2: (38.479,-32.160,39.761)
N1: (37.886,-31.017,39.402)
N3: (38.967,-32.495,40.949)
N6: (37.112,-28.911,39.951)
N7: (38.173,-29.523,42.780)
N9: (39.150,-31.499,43.167)
O5': (37.000,-34.078,46.295)
O3': (41.685,-34.308,45.556)
OP2: (35.950,-31.802,46.116)
C3': (40.717,-33.347,45.914)
C1': (39.832,-32.595,43.859)
C5': (38.277,-33.613,46.758)
O4': (38.861,-33.428,44.446)
C8: (38.752,-30.287,43.674)
O2': (42.078,-31.948,44.422)
C6: (37.714,-30.046,40.319)
C5: (38.181,-30.285,41.623)
C4: (38.779,-31.507,41.844)
P: (35.676,-33.210,46.500)
C4': (39.328,-33.940,45.713)
C2': (40.786,-32.161,44.963)
C2: (38.479,-32.160,39.761)
N1: (37.886,-31.017,39.402)
N3: (38.967,-32.495,40.949)
N6: (37.112,-28.911,39.951)
N7: (38.173,-29.523,42.780)
N9: (39.150,-31.499,43.167)
O5': (37.000,-34.078,46.295)
O3': (41.685,-34.308,45.556)
Image (generated by PyMOL):