Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0871:0868
Extra
PDB:
ATOM 1 O3' U A 870 75.736 132.964 74.647 1.00 26.73 O
ATOM 2 P C A 871 76.781 133.109 75.863 1.00 26.43 P
ATOM 3 OP1 C A 871 76.089 132.769 77.128 1.00 23.98 O
ATOM 4 OP2 C A 871 77.477 134.415 75.739 1.00 26.57 O
ATOM 5 O5' C A 871 77.846 131.963 75.583 1.00 23.86 O
ATOM 6 C5' C A 871 77.468 130.584 75.572 1.00 21.57 C
ATOM 7 C4' C A 871 78.599 129.748 75.024 1.00 23.28 C
ATOM 8 O4' C A 871 78.789 130.061 73.616 1.00 24.66 O
ATOM 9 C3' C A 871 79.957 129.969 75.691 1.00 25.81 C
ATOM 10 O3' C A 871 80.688 128.750 75.663 1.00 26.74 O
ATOM 11 C2' C A 871 80.613 130.991 74.767 1.00 25.75 C
ATOM 12 O2' C A 871 82.023 130.975 74.797 1.00 28.32 O
ATOM 13 C1' C A 871 80.117 130.514 73.407 1.00 24.94 C
ATOM 14 N1 C A 871 80.122 131.556 72.361 1.00 23.44 N
ATOM 15 C2 C A 871 80.884 131.346 71.206 1.00 23.68 C
ATOM 16 O2 C A 871 81.534 130.303 71.099 1.00 24.24 O
ATOM 17 N3 C A 871 80.897 132.288 70.240 1.00 24.93 N
ATOM 18 C4 C A 871 80.199 133.413 70.398 1.00 25.88 C
ATOM 19 N4 C A 871 80.255 134.328 69.421 1.00 26.57 N
ATOM 20 C5 C A 871 79.418 133.656 71.562 1.00 24.10 C
ATOM 21 C6 C A 871 79.404 132.709 72.507 1.00 23.24 C
ATOM 22 P G A 872 81.010 127.989 77.034 1.00 28.74 P
ATOM 23 OP1 G A 872 79.737 127.683 77.734 1.00 26.12 O
ATOM 24 OP2 G A 872 82.061 128.762 77.728 1.00 29.65 O
ATOM 25 O5' G A 872 81.649 126.608 76.582 1.00 27.67 O
TER
ATOM 1 O3' C B 867 81.076 138.395 68.176 1.00 26.73 O
ATOM 2 P C B 868 79.540 137.956 68.090 1.00 27.39 P
ATOM 3 OP1 C B 868 79.277 136.908 69.116 1.00 27.60 O
ATOM 4 OP2 C B 868 79.227 137.674 66.664 1.00 26.93 O
ATOM 5 O5' C B 868 78.783 139.274 68.544 1.00 25.15 O
ATOM 6 C5' C B 868 78.990 139.809 69.859 1.00 25.37 C
ATOM 7 C4' C B 868 78.049 140.959 70.112 1.00 24.72 C
ATOM 8 O4' C B 868 78.433 142.084 69.267 1.00 22.78 O
ATOM 9 C3' C B 868 76.584 140.666 69.810 1.00 23.74 C
ATOM 10 O3' C B 868 75.752 141.322 70.745 1.00 26.02 O
ATOM 11 C2' C B 868 76.403 141.261 68.417 1.00 24.06 C
ATOM 12 O2' C B 868 75.076 141.648 68.130 1.00 22.84 O
ATOM 13 C1' C B 868 77.339 142.470 68.462 1.00 22.24 C
ATOM 14 N1 C B 868 77.845 142.821 67.121 1.00 22.89 N
ATOM 15 C2 C B 868 77.424 144.021 66.524 1.00 26.60 C
ATOM 16 O2 C B 868 76.723 144.818 67.183 1.00 29.90 O
ATOM 17 N3 C B 868 77.798 144.290 65.249 1.00 26.60 N
ATOM 18 C4 C B 868 78.581 143.436 64.587 1.00 25.13 C
ATOM 19 N4 C B 868 78.892 143.726 63.319 1.00 23.48 N
ATOM 20 C5 C B 868 79.072 142.241 65.192 1.00 23.87 C
ATOM 21 C6 C B 868 78.684 141.976 66.447 1.00 24.06 C
ATOM 22 P A B 869 74.502 140.539 71.379 1.00 26.54 P
ATOM 23 OP1 A B 869 74.953 139.169 71.718 1.00 28.19 O
ATOM 24 OP2 A B 869 73.326 140.730 70.502 1.00 29.08 O
ATOM 25 O5' A B 869 74.216 141.307 72.743 1.00 27.95 O
TER
ATOM 2 P C A 871 76.781 133.109 75.863 1.00 26.43 P
ATOM 3 OP1 C A 871 76.089 132.769 77.128 1.00 23.98 O
ATOM 4 OP2 C A 871 77.477 134.415 75.739 1.00 26.57 O
ATOM 5 O5' C A 871 77.846 131.963 75.583 1.00 23.86 O
ATOM 6 C5' C A 871 77.468 130.584 75.572 1.00 21.57 C
ATOM 7 C4' C A 871 78.599 129.748 75.024 1.00 23.28 C
ATOM 8 O4' C A 871 78.789 130.061 73.616 1.00 24.66 O
ATOM 9 C3' C A 871 79.957 129.969 75.691 1.00 25.81 C
ATOM 10 O3' C A 871 80.688 128.750 75.663 1.00 26.74 O
ATOM 11 C2' C A 871 80.613 130.991 74.767 1.00 25.75 C
ATOM 12 O2' C A 871 82.023 130.975 74.797 1.00 28.32 O
ATOM 13 C1' C A 871 80.117 130.514 73.407 1.00 24.94 C
ATOM 14 N1 C A 871 80.122 131.556 72.361 1.00 23.44 N
ATOM 15 C2 C A 871 80.884 131.346 71.206 1.00 23.68 C
ATOM 16 O2 C A 871 81.534 130.303 71.099 1.00 24.24 O
ATOM 17 N3 C A 871 80.897 132.288 70.240 1.00 24.93 N
ATOM 18 C4 C A 871 80.199 133.413 70.398 1.00 25.88 C
ATOM 19 N4 C A 871 80.255 134.328 69.421 1.00 26.57 N
ATOM 20 C5 C A 871 79.418 133.656 71.562 1.00 24.10 C
ATOM 21 C6 C A 871 79.404 132.709 72.507 1.00 23.24 C
ATOM 22 P G A 872 81.010 127.989 77.034 1.00 28.74 P
ATOM 23 OP1 G A 872 79.737 127.683 77.734 1.00 26.12 O
ATOM 24 OP2 G A 872 82.061 128.762 77.728 1.00 29.65 O
ATOM 25 O5' G A 872 81.649 126.608 76.582 1.00 27.67 O
TER
ATOM 1 O3' C B 867 81.076 138.395 68.176 1.00 26.73 O
ATOM 2 P C B 868 79.540 137.956 68.090 1.00 27.39 P
ATOM 3 OP1 C B 868 79.277 136.908 69.116 1.00 27.60 O
ATOM 4 OP2 C B 868 79.227 137.674 66.664 1.00 26.93 O
ATOM 5 O5' C B 868 78.783 139.274 68.544 1.00 25.15 O
ATOM 6 C5' C B 868 78.990 139.809 69.859 1.00 25.37 C
ATOM 7 C4' C B 868 78.049 140.959 70.112 1.00 24.72 C
ATOM 8 O4' C B 868 78.433 142.084 69.267 1.00 22.78 O
ATOM 9 C3' C B 868 76.584 140.666 69.810 1.00 23.74 C
ATOM 10 O3' C B 868 75.752 141.322 70.745 1.00 26.02 O
ATOM 11 C2' C B 868 76.403 141.261 68.417 1.00 24.06 C
ATOM 12 O2' C B 868 75.076 141.648 68.130 1.00 22.84 O
ATOM 13 C1' C B 868 77.339 142.470 68.462 1.00 22.24 C
ATOM 14 N1 C B 868 77.845 142.821 67.121 1.00 22.89 N
ATOM 15 C2 C B 868 77.424 144.021 66.524 1.00 26.60 C
ATOM 16 O2 C B 868 76.723 144.818 67.183 1.00 29.90 O
ATOM 17 N3 C B 868 77.798 144.290 65.249 1.00 26.60 N
ATOM 18 C4 C B 868 78.581 143.436 64.587 1.00 25.13 C
ATOM 19 N4 C B 868 78.892 143.726 63.319 1.00 23.48 N
ATOM 20 C5 C B 868 79.072 142.241 65.192 1.00 23.87 C
ATOM 21 C6 C B 868 78.684 141.976 66.447 1.00 24.06 C
ATOM 22 P A B 869 74.502 140.539 71.379 1.00 26.54 P
ATOM 23 OP1 A B 869 74.953 139.169 71.718 1.00 28.19 O
ATOM 24 OP2 A B 869 73.326 140.730 70.502 1.00 29.08 O
ATOM 25 O5' A B 869 74.216 141.307 72.743 1.00 27.95 O
TER
Atoms:
C2: (80.884,131.346,71.206)
OP1: (76.089,132.769,77.128)
OP2: (77.477,134.415,75.739)
C4: (80.199,133.413,70.398)
O5': (77.846,131.963,75.583)
C3': (79.957,129.969,75.691)
C1': (80.117,130.514,73.407)
O4': (78.789,130.061,73.616)
C5': (77.468,130.584,75.572)
P: (76.781,133.109,75.863)
O2: (81.534,130.303,71.099)
C4': (78.599,129.748,75.024)
C2': (80.613,130.991,74.767)
O2': (82.023,130.975,74.797)
N1: (80.122,131.556,72.361)
N3: (80.897,132.288,70.240)
N4: (80.255,134.328,69.421)
C6: (79.404,132.709,72.507)
C5: (79.418,133.656,71.562)
O3': (80.688,128.750,75.663)
OP1: (76.089,132.769,77.128)
OP2: (77.477,134.415,75.739)
C4: (80.199,133.413,70.398)
O5': (77.846,131.963,75.583)
C3': (79.957,129.969,75.691)
C1': (80.117,130.514,73.407)
O4': (78.789,130.061,73.616)
C5': (77.468,130.584,75.572)
P: (76.781,133.109,75.863)
O2: (81.534,130.303,71.099)
C4': (78.599,129.748,75.024)
C2': (80.613,130.991,74.767)
O2': (82.023,130.975,74.797)
N1: (80.122,131.556,72.361)
N3: (80.897,132.288,70.240)
N4: (80.255,134.328,69.421)
C6: (79.404,132.709,72.507)
C5: (79.418,133.656,71.562)
O3': (80.688,128.750,75.663)
C2: (77.424,144.021,66.524)
OP1: (79.277,136.908,69.116)
OP2: (79.227,137.674,66.664)
C4: (78.581,143.436,64.587)
O5': (78.783,139.274,68.544)
C3': (76.584,140.666,69.810)
C1': (77.339,142.470,68.462)
O4': (78.433,142.084,69.267)
C5': (78.990,139.809,69.859)
P: (79.540,137.956,68.090)
O2: (76.723,144.818,67.183)
C4': (78.049,140.959,70.112)
C2': (76.403,141.261,68.417)
O2': (75.076,141.648,68.130)
N1: (77.845,142.821,67.121)
N3: (77.798,144.290,65.249)
N4: (78.892,143.726,63.319)
C6: (78.684,141.976,66.447)
C5: (79.072,142.241,65.192)
O3': (75.752,141.322,70.745)
OP1: (79.277,136.908,69.116)
OP2: (79.227,137.674,66.664)
C4: (78.581,143.436,64.587)
O5': (78.783,139.274,68.544)
C3': (76.584,140.666,69.810)
C1': (77.339,142.470,68.462)
O4': (78.433,142.084,69.267)
C5': (78.990,139.809,69.859)
P: (79.540,137.956,68.090)
O2: (76.723,144.818,67.183)
C4': (78.049,140.959,70.112)
C2': (76.403,141.261,68.417)
O2': (75.076,141.648,68.130)
N1: (77.845,142.821,67.121)
N3: (77.798,144.290,65.249)
N4: (78.892,143.726,63.319)
C6: (78.684,141.976,66.447)
C5: (79.072,142.241,65.192)
O3': (75.752,141.322,70.745)
Image (generated by PyMOL):