Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A280:A244
Extra
PDB:
ATOM 1 O3' G A 279 -3.326 75.903 101.051 1.00 31.79 O
ATOM 2 P A A 280 -3.424 74.541 101.918 1.00 27.41 P
ATOM 3 OP1 A A 280 -2.834 73.475 101.102 1.00 27.41 O
ATOM 4 OP2 A A 280 -4.843 74.403 102.362 1.00 27.41 O
ATOM 5 O5' A A 280 -2.486 74.819 103.175 1.00 27.41 O
ATOM 6 C5' A A 280 -1.431 73.926 103.501 1.00 27.41 C
ATOM 7 C4' A A 280 -0.325 74.624 104.253 1.00 27.41 C
ATOM 8 O4' A A 280 -0.001 75.876 103.585 1.00 27.41 O
ATOM 9 C3' A A 280 -0.647 75.032 105.684 1.00 27.41 C
ATOM 10 O3' A A 280 -0.454 73.989 106.623 1.00 27.41 O
ATOM 11 C2' A A 280 0.261 76.232 105.905 1.00 27.41 C
ATOM 12 O2' A A 280 1.592 75.826 106.159 1.00 27.41 O
ATOM 13 C1' A A 280 0.207 76.893 104.537 1.00 27.41 C
ATOM 14 N9 A A 280 -0.914 77.835 104.446 1.00 27.52 N
ATOM 15 C8 A A 280 -1.909 77.872 103.508 1.00 27.52 C
ATOM 16 N7 A A 280 -2.781 78.833 103.716 1.00 27.52 N
ATOM 17 C5 A A 280 -2.329 79.457 104.876 1.00 27.52 C
ATOM 18 C6 A A 280 -2.814 80.548 105.618 1.00 27.52 C
ATOM 19 N6 A A 280 -3.906 81.253 105.313 1.00 27.52 N
ATOM 20 N1 A A 280 -2.114 80.891 106.712 1.00 27.52 N
ATOM 21 C2 A A 280 -1.013 80.194 107.034 1.00 27.52 C
ATOM 22 N3 A A 280 -0.460 79.156 106.419 1.00 27.52 N
ATOM 23 C4 A A 280 -1.178 78.840 105.336 1.00 27.52 C
ATOM 24 P U A 281 -1.722 73.212 107.227 1.00 29.94 P
ATOM 25 OP1 U A 281 -1.203 72.024 107.921 1.00 29.94 O
ATOM 26 OP2 U A 281 -2.679 73.023 106.112 1.00 29.94 O
ATOM 27 O5' U A 281 -2.339 74.247 108.287 1.00 29.94 O
TER
ATOM 1 O3' U B 243 -9.180 85.752 106.293 1.00 42.87 O
ATOM 2 P A B 244 -7.902 86.335 105.471 1.00 38.42 P
ATOM 3 OP1 A B 244 -7.526 87.608 106.117 1.00 38.42 O
ATOM 4 OP2 A B 244 -8.271 86.344 104.032 1.00 38.42 O
ATOM 5 O5' A B 244 -6.756 85.263 105.720 1.00 38.42 O
ATOM 6 C5' A B 244 -5.937 85.336 106.875 1.00 38.42 C
ATOM 7 C4' A B 244 -4.484 85.632 106.545 1.00 38.42 C
ATOM 8 O4' A B 244 -3.893 84.515 105.837 1.00 38.42 O
ATOM 9 C3' A B 244 -4.208 86.878 105.697 1.00 38.42 C
ATOM 10 O3' A B 244 -3.126 87.610 106.271 1.00 38.42 O
ATOM 11 C2' A B 244 -3.758 86.307 104.349 1.00 38.42 C
ATOM 12 O2' A B 244 -2.841 87.119 103.646 1.00 38.42 O
ATOM 13 C1' A B 244 -3.120 84.991 104.763 1.00 38.42 C
ATOM 14 N9 A B 244 -3.141 83.973 103.722 1.00 38.06 N
ATOM 15 C8 A B 244 -4.223 83.695 102.935 1.00 38.06 C
ATOM 16 N7 A B 244 -4.026 82.730 102.085 1.00 38.06 N
ATOM 17 C5 A B 244 -2.724 82.357 102.345 1.00 38.06 C
ATOM 18 C6 A B 244 -1.942 81.377 101.752 1.00 38.06 C
ATOM 19 N6 A B 244 -2.456 80.627 100.775 1.00 38.06 N
ATOM 20 N1 A B 244 -0.664 81.222 102.199 1.00 38.06 N
ATOM 21 C2 A B 244 -0.235 82.018 103.190 1.00 38.06 C
ATOM 22 N3 A B 244 -0.899 82.984 103.835 1.00 38.06 N
ATOM 23 C4 A B 244 -2.151 83.102 103.353 1.00 38.06 C
ATOM 24 P G B 245 -3.255 88.258 107.738 1.00 47.26 P
ATOM 25 OP1 G B 245 -3.900 87.257 108.625 1.00 47.26 O
ATOM 26 OP2 G B 245 -3.911 89.578 107.579 1.00 47.26 O
ATOM 27 O5' G B 245 -1.723 88.446 108.141 1.00 47.26 O
TER
ATOM 2 P A A 280 -3.424 74.541 101.918 1.00 27.41 P
ATOM 3 OP1 A A 280 -2.834 73.475 101.102 1.00 27.41 O
ATOM 4 OP2 A A 280 -4.843 74.403 102.362 1.00 27.41 O
ATOM 5 O5' A A 280 -2.486 74.819 103.175 1.00 27.41 O
ATOM 6 C5' A A 280 -1.431 73.926 103.501 1.00 27.41 C
ATOM 7 C4' A A 280 -0.325 74.624 104.253 1.00 27.41 C
ATOM 8 O4' A A 280 -0.001 75.876 103.585 1.00 27.41 O
ATOM 9 C3' A A 280 -0.647 75.032 105.684 1.00 27.41 C
ATOM 10 O3' A A 280 -0.454 73.989 106.623 1.00 27.41 O
ATOM 11 C2' A A 280 0.261 76.232 105.905 1.00 27.41 C
ATOM 12 O2' A A 280 1.592 75.826 106.159 1.00 27.41 O
ATOM 13 C1' A A 280 0.207 76.893 104.537 1.00 27.41 C
ATOM 14 N9 A A 280 -0.914 77.835 104.446 1.00 27.52 N
ATOM 15 C8 A A 280 -1.909 77.872 103.508 1.00 27.52 C
ATOM 16 N7 A A 280 -2.781 78.833 103.716 1.00 27.52 N
ATOM 17 C5 A A 280 -2.329 79.457 104.876 1.00 27.52 C
ATOM 18 C6 A A 280 -2.814 80.548 105.618 1.00 27.52 C
ATOM 19 N6 A A 280 -3.906 81.253 105.313 1.00 27.52 N
ATOM 20 N1 A A 280 -2.114 80.891 106.712 1.00 27.52 N
ATOM 21 C2 A A 280 -1.013 80.194 107.034 1.00 27.52 C
ATOM 22 N3 A A 280 -0.460 79.156 106.419 1.00 27.52 N
ATOM 23 C4 A A 280 -1.178 78.840 105.336 1.00 27.52 C
ATOM 24 P U A 281 -1.722 73.212 107.227 1.00 29.94 P
ATOM 25 OP1 U A 281 -1.203 72.024 107.921 1.00 29.94 O
ATOM 26 OP2 U A 281 -2.679 73.023 106.112 1.00 29.94 O
ATOM 27 O5' U A 281 -2.339 74.247 108.287 1.00 29.94 O
TER
ATOM 1 O3' U B 243 -9.180 85.752 106.293 1.00 42.87 O
ATOM 2 P A B 244 -7.902 86.335 105.471 1.00 38.42 P
ATOM 3 OP1 A B 244 -7.526 87.608 106.117 1.00 38.42 O
ATOM 4 OP2 A B 244 -8.271 86.344 104.032 1.00 38.42 O
ATOM 5 O5' A B 244 -6.756 85.263 105.720 1.00 38.42 O
ATOM 6 C5' A B 244 -5.937 85.336 106.875 1.00 38.42 C
ATOM 7 C4' A B 244 -4.484 85.632 106.545 1.00 38.42 C
ATOM 8 O4' A B 244 -3.893 84.515 105.837 1.00 38.42 O
ATOM 9 C3' A B 244 -4.208 86.878 105.697 1.00 38.42 C
ATOM 10 O3' A B 244 -3.126 87.610 106.271 1.00 38.42 O
ATOM 11 C2' A B 244 -3.758 86.307 104.349 1.00 38.42 C
ATOM 12 O2' A B 244 -2.841 87.119 103.646 1.00 38.42 O
ATOM 13 C1' A B 244 -3.120 84.991 104.763 1.00 38.42 C
ATOM 14 N9 A B 244 -3.141 83.973 103.722 1.00 38.06 N
ATOM 15 C8 A B 244 -4.223 83.695 102.935 1.00 38.06 C
ATOM 16 N7 A B 244 -4.026 82.730 102.085 1.00 38.06 N
ATOM 17 C5 A B 244 -2.724 82.357 102.345 1.00 38.06 C
ATOM 18 C6 A B 244 -1.942 81.377 101.752 1.00 38.06 C
ATOM 19 N6 A B 244 -2.456 80.627 100.775 1.00 38.06 N
ATOM 20 N1 A B 244 -0.664 81.222 102.199 1.00 38.06 N
ATOM 21 C2 A B 244 -0.235 82.018 103.190 1.00 38.06 C
ATOM 22 N3 A B 244 -0.899 82.984 103.835 1.00 38.06 N
ATOM 23 C4 A B 244 -2.151 83.102 103.353 1.00 38.06 C
ATOM 24 P G B 245 -3.255 88.258 107.738 1.00 47.26 P
ATOM 25 OP1 G B 245 -3.900 87.257 108.625 1.00 47.26 O
ATOM 26 OP2 G B 245 -3.911 89.578 107.579 1.00 47.26 O
ATOM 27 O5' G B 245 -1.723 88.446 108.141 1.00 47.26 O
TER
Atoms:
OP1: (-2.834,73.475,101.102)
OP2: (-4.843,74.403,102.362)
C3': (-0.647,75.032,105.684)
C1': (0.207,76.893,104.537)
C5': (-1.431,73.926,103.501)
O4': (-0.001,75.876,103.585)
C8: (-1.909,77.872,103.508)
O2': (1.592,75.826,106.159)
C6: (-2.814,80.548,105.618)
C5: (-2.329,79.457,104.876)
C4: (-1.178,78.840,105.336)
P: (-3.424,74.541,101.918)
C4': (-0.325,74.624,104.253)
C2': (0.261,76.232,105.905)
C2: (-1.013,80.194,107.034)
N1: (-2.114,80.891,106.712)
N3: (-0.460,79.156,106.419)
N6: (-3.906,81.253,105.313)
N7: (-2.781,78.833,103.716)
N9: (-0.914,77.835,104.446)
O5': (-2.486,74.819,103.175)
O3': (-0.454,73.989,106.623)
OP2: (-4.843,74.403,102.362)
C3': (-0.647,75.032,105.684)
C1': (0.207,76.893,104.537)
C5': (-1.431,73.926,103.501)
O4': (-0.001,75.876,103.585)
C8: (-1.909,77.872,103.508)
O2': (1.592,75.826,106.159)
C6: (-2.814,80.548,105.618)
C5: (-2.329,79.457,104.876)
C4: (-1.178,78.840,105.336)
P: (-3.424,74.541,101.918)
C4': (-0.325,74.624,104.253)
C2': (0.261,76.232,105.905)
C2: (-1.013,80.194,107.034)
N1: (-2.114,80.891,106.712)
N3: (-0.460,79.156,106.419)
N6: (-3.906,81.253,105.313)
N7: (-2.781,78.833,103.716)
N9: (-0.914,77.835,104.446)
O5': (-2.486,74.819,103.175)
O3': (-0.454,73.989,106.623)
OP1: (-7.526,87.608,106.117)
OP2: (-8.271,86.344,104.032)
C3': (-4.208,86.878,105.697)
C1': (-3.120,84.991,104.763)
C5': (-5.937,85.336,106.875)
O4': (-3.893,84.515,105.837)
C8: (-4.223,83.695,102.935)
O2': (-2.841,87.119,103.646)
C6: (-1.942,81.377,101.752)
C5: (-2.724,82.357,102.345)
C4: (-2.151,83.102,103.353)
P: (-7.902,86.335,105.471)
C4': (-4.484,85.632,106.545)
C2': (-3.758,86.307,104.349)
C2: (-0.235,82.018,103.190)
N1: (-0.664,81.222,102.199)
N3: (-0.899,82.984,103.835)
N6: (-2.456,80.627,100.775)
N7: (-4.026,82.730,102.085)
N9: (-3.141,83.973,103.722)
O5': (-6.756,85.263,105.720)
O3': (-3.126,87.610,106.271)
OP2: (-8.271,86.344,104.032)
C3': (-4.208,86.878,105.697)
C1': (-3.120,84.991,104.763)
C5': (-5.937,85.336,106.875)
O4': (-3.893,84.515,105.837)
C8: (-4.223,83.695,102.935)
O2': (-2.841,87.119,103.646)
C6: (-1.942,81.377,101.752)
C5: (-2.724,82.357,102.345)
C4: (-2.151,83.102,103.353)
P: (-7.902,86.335,105.471)
C4': (-4.484,85.632,106.545)
C2': (-3.758,86.307,104.349)
C2: (-0.235,82.018,103.190)
N1: (-0.664,81.222,102.199)
N3: (-0.899,82.984,103.835)
N6: (-2.456,80.627,100.775)
N7: (-4.026,82.730,102.085)
N9: (-3.141,83.973,103.722)
O5': (-6.756,85.263,105.720)
O3': (-3.126,87.610,106.271)
Image (generated by PyMOL):