Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0746:0748
Extra
PDB:
ATOM 1 O3' A A 745 59.873 103.371 57.855 1.00 46.80 O
ATOM 2 P C A 746 60.064 104.490 58.994 1.00 45.89 P
ATOM 3 OP1 C A 746 61.412 104.224 59.573 1.00 46.73 O
ATOM 4 OP2 C A 746 58.876 104.556 59.889 1.00 45.57 O
ATOM 5 O5' C A 746 60.150 105.834 58.158 1.00 43.19 O
ATOM 6 C5' C A 746 59.119 106.821 58.234 1.00 43.74 C
ATOM 7 C4' C A 746 58.623 107.164 56.850 1.00 43.26 C
ATOM 8 O4' C A 746 57.795 106.083 56.350 1.00 43.02 O
ATOM 9 C3' C A 746 57.736 108.394 56.807 1.00 43.19 C
ATOM 10 O3' C A 746 58.572 109.543 56.684 1.00 43.55 O
ATOM 11 C2' C A 746 56.864 108.130 55.590 1.00 42.40 C
ATOM 12 O2' C A 746 57.519 108.449 54.385 1.00 46.76 O
ATOM 13 C1' C A 746 56.664 106.615 55.683 1.00 42.06 C
ATOM 14 N1 C A 746 55.469 106.263 56.467 1.00 40.64 N
ATOM 15 C2 C A 746 54.212 106.335 55.858 1.00 40.39 C
ATOM 16 O2 C A 746 54.142 106.589 54.646 1.00 39.97 O
ATOM 17 N3 C A 746 53.108 106.115 56.603 1.00 39.38 N
ATOM 18 C4 C A 746 53.229 105.808 57.895 1.00 39.56 C
ATOM 19 N4 C A 746 52.117 105.642 58.604 1.00 39.70 N
ATOM 20 C5 C A 746 54.497 105.669 58.522 1.00 39.79 C
ATOM 21 C6 C A 746 55.578 105.903 57.780 1.00 39.64 C
ATOM 22 P G A 747 57.931 111.014 56.629 1.00 46.79 P
ATOM 23 OP1 G A 747 56.759 111.006 55.711 1.00 46.43 O
ATOM 24 OP2 G A 747 59.054 111.947 56.375 1.00 49.47 O
ATOM 25 O5' G A 747 57.406 111.280 58.103 1.00 45.40 O
TER
ATOM 1 O3' G B 747 56.094 111.185 62.246 1.00 40.08 O
ATOM 2 P A B 748 55.799 109.921 63.180 1.00 41.02 P
ATOM 3 OP1 A B 748 55.814 110.492 64.561 1.00 39.68 O
ATOM 4 OP2 A B 748 56.754 108.837 62.823 1.00 38.90 O
ATOM 5 O5' A B 748 54.317 109.462 62.786 1.00 38.13 O
ATOM 6 C5' A B 748 53.155 110.054 63.432 1.00 40.29 C
ATOM 7 C4' A B 748 51.894 109.287 63.088 1.00 39.75 C
ATOM 8 O4' A B 748 51.545 109.491 61.698 1.00 41.53 O
ATOM 9 C3' A B 748 51.973 107.780 63.262 1.00 40.00 C
ATOM 10 O3' A B 748 50.657 107.250 63.466 1.00 38.91 O
ATOM 11 C2' A B 748 52.539 107.359 61.908 1.00 41.61 C
ATOM 12 O2' A B 748 52.290 106.016 61.573 1.00 44.38 O
ATOM 13 C1' A B 748 51.811 108.313 60.958 1.00 41.55 C
ATOM 14 N9 A B 748 52.565 108.710 59.764 1.00 43.45 N
ATOM 15 C8 A B 748 53.923 108.626 59.526 1.00 43.61 C
ATOM 16 N7 A B 748 54.287 109.105 58.359 1.00 42.92 N
ATOM 17 C5 A B 748 53.093 109.536 57.788 1.00 44.30 C
ATOM 18 C6 A B 748 52.798 110.163 56.557 1.00 44.13 C
ATOM 19 N6 A B 748 53.723 110.519 55.668 1.00 44.51 N
ATOM 20 N1 A B 748 51.503 110.431 56.282 1.00 43.15 N
ATOM 21 C2 A B 748 50.578 110.120 57.199 1.00 43.20 C
ATOM 22 N3 A B 748 50.729 109.560 58.397 1.00 42.61 N
ATOM 23 C4 A B 748 52.024 109.285 58.635 1.00 43.54 C
ATOM 24 P C B 749 49.988 107.267 64.935 1.00 36.73 P
ATOM 25 OP1 C B 749 51.035 107.202 65.969 1.00 39.61 O
ATOM 26 OP2 C B 749 48.906 106.260 64.934 1.00 40.77 O
ATOM 27 O5' C B 749 49.300 108.693 65.056 1.00 31.64 O
TER
ATOM 2 P C A 746 60.064 104.490 58.994 1.00 45.89 P
ATOM 3 OP1 C A 746 61.412 104.224 59.573 1.00 46.73 O
ATOM 4 OP2 C A 746 58.876 104.556 59.889 1.00 45.57 O
ATOM 5 O5' C A 746 60.150 105.834 58.158 1.00 43.19 O
ATOM 6 C5' C A 746 59.119 106.821 58.234 1.00 43.74 C
ATOM 7 C4' C A 746 58.623 107.164 56.850 1.00 43.26 C
ATOM 8 O4' C A 746 57.795 106.083 56.350 1.00 43.02 O
ATOM 9 C3' C A 746 57.736 108.394 56.807 1.00 43.19 C
ATOM 10 O3' C A 746 58.572 109.543 56.684 1.00 43.55 O
ATOM 11 C2' C A 746 56.864 108.130 55.590 1.00 42.40 C
ATOM 12 O2' C A 746 57.519 108.449 54.385 1.00 46.76 O
ATOM 13 C1' C A 746 56.664 106.615 55.683 1.00 42.06 C
ATOM 14 N1 C A 746 55.469 106.263 56.467 1.00 40.64 N
ATOM 15 C2 C A 746 54.212 106.335 55.858 1.00 40.39 C
ATOM 16 O2 C A 746 54.142 106.589 54.646 1.00 39.97 O
ATOM 17 N3 C A 746 53.108 106.115 56.603 1.00 39.38 N
ATOM 18 C4 C A 746 53.229 105.808 57.895 1.00 39.56 C
ATOM 19 N4 C A 746 52.117 105.642 58.604 1.00 39.70 N
ATOM 20 C5 C A 746 54.497 105.669 58.522 1.00 39.79 C
ATOM 21 C6 C A 746 55.578 105.903 57.780 1.00 39.64 C
ATOM 22 P G A 747 57.931 111.014 56.629 1.00 46.79 P
ATOM 23 OP1 G A 747 56.759 111.006 55.711 1.00 46.43 O
ATOM 24 OP2 G A 747 59.054 111.947 56.375 1.00 49.47 O
ATOM 25 O5' G A 747 57.406 111.280 58.103 1.00 45.40 O
TER
ATOM 1 O3' G B 747 56.094 111.185 62.246 1.00 40.08 O
ATOM 2 P A B 748 55.799 109.921 63.180 1.00 41.02 P
ATOM 3 OP1 A B 748 55.814 110.492 64.561 1.00 39.68 O
ATOM 4 OP2 A B 748 56.754 108.837 62.823 1.00 38.90 O
ATOM 5 O5' A B 748 54.317 109.462 62.786 1.00 38.13 O
ATOM 6 C5' A B 748 53.155 110.054 63.432 1.00 40.29 C
ATOM 7 C4' A B 748 51.894 109.287 63.088 1.00 39.75 C
ATOM 8 O4' A B 748 51.545 109.491 61.698 1.00 41.53 O
ATOM 9 C3' A B 748 51.973 107.780 63.262 1.00 40.00 C
ATOM 10 O3' A B 748 50.657 107.250 63.466 1.00 38.91 O
ATOM 11 C2' A B 748 52.539 107.359 61.908 1.00 41.61 C
ATOM 12 O2' A B 748 52.290 106.016 61.573 1.00 44.38 O
ATOM 13 C1' A B 748 51.811 108.313 60.958 1.00 41.55 C
ATOM 14 N9 A B 748 52.565 108.710 59.764 1.00 43.45 N
ATOM 15 C8 A B 748 53.923 108.626 59.526 1.00 43.61 C
ATOM 16 N7 A B 748 54.287 109.105 58.359 1.00 42.92 N
ATOM 17 C5 A B 748 53.093 109.536 57.788 1.00 44.30 C
ATOM 18 C6 A B 748 52.798 110.163 56.557 1.00 44.13 C
ATOM 19 N6 A B 748 53.723 110.519 55.668 1.00 44.51 N
ATOM 20 N1 A B 748 51.503 110.431 56.282 1.00 43.15 N
ATOM 21 C2 A B 748 50.578 110.120 57.199 1.00 43.20 C
ATOM 22 N3 A B 748 50.729 109.560 58.397 1.00 42.61 N
ATOM 23 C4 A B 748 52.024 109.285 58.635 1.00 43.54 C
ATOM 24 P C B 749 49.988 107.267 64.935 1.00 36.73 P
ATOM 25 OP1 C B 749 51.035 107.202 65.969 1.00 39.61 O
ATOM 26 OP2 C B 749 48.906 106.260 64.934 1.00 40.77 O
ATOM 27 O5' C B 749 49.300 108.693 65.056 1.00 31.64 O
TER
Atoms:
C2: (54.212,106.335,55.858)
OP1: (61.412,104.224,59.573)
OP2: (58.876,104.556,59.889)
C4: (53.229,105.808,57.895)
O5': (60.150,105.834,58.158)
C3': (57.736,108.394,56.807)
C1': (56.664,106.615,55.683)
O4': (57.795,106.083,56.350)
C5': (59.119,106.821,58.234)
P: (60.064,104.490,58.994)
O2: (54.142,106.589,54.646)
C4': (58.623,107.164,56.850)
C2': (56.864,108.130,55.590)
O2': (57.519,108.449,54.385)
N1: (55.469,106.263,56.467)
N3: (53.108,106.115,56.603)
N4: (52.117,105.642,58.604)
C6: (55.578,105.903,57.780)
C5: (54.497,105.669,58.522)
O3': (58.572,109.543,56.684)
OP1: (61.412,104.224,59.573)
OP2: (58.876,104.556,59.889)
C4: (53.229,105.808,57.895)
O5': (60.150,105.834,58.158)
C3': (57.736,108.394,56.807)
C1': (56.664,106.615,55.683)
O4': (57.795,106.083,56.350)
C5': (59.119,106.821,58.234)
P: (60.064,104.490,58.994)
O2: (54.142,106.589,54.646)
C4': (58.623,107.164,56.850)
C2': (56.864,108.130,55.590)
O2': (57.519,108.449,54.385)
N1: (55.469,106.263,56.467)
N3: (53.108,106.115,56.603)
N4: (52.117,105.642,58.604)
C6: (55.578,105.903,57.780)
C5: (54.497,105.669,58.522)
O3': (58.572,109.543,56.684)
OP1: (55.814,110.492,64.561)
OP2: (56.754,108.837,62.823)
C3': (51.973,107.780,63.262)
C1': (51.811,108.313,60.958)
C5': (53.155,110.054,63.432)
O4': (51.545,109.491,61.698)
C8: (53.923,108.626,59.526)
O2': (52.290,106.016,61.573)
C6: (52.798,110.163,56.557)
C5: (53.093,109.536,57.788)
C4: (52.024,109.285,58.635)
P: (55.799,109.921,63.180)
C4': (51.894,109.287,63.088)
C2': (52.539,107.359,61.908)
C2: (50.578,110.120,57.199)
N1: (51.503,110.431,56.282)
N3: (50.729,109.560,58.397)
N6: (53.723,110.519,55.668)
N7: (54.287,109.105,58.359)
N9: (52.565,108.710,59.764)
O5': (54.317,109.462,62.786)
O3': (50.657,107.250,63.466)
OP2: (56.754,108.837,62.823)
C3': (51.973,107.780,63.262)
C1': (51.811,108.313,60.958)
C5': (53.155,110.054,63.432)
O4': (51.545,109.491,61.698)
C8: (53.923,108.626,59.526)
O2': (52.290,106.016,61.573)
C6: (52.798,110.163,56.557)
C5: (53.093,109.536,57.788)
C4: (52.024,109.285,58.635)
P: (55.799,109.921,63.180)
C4': (51.894,109.287,63.088)
C2': (52.539,107.359,61.908)
C2: (50.578,110.120,57.199)
N1: (51.503,110.431,56.282)
N3: (50.729,109.560,58.397)
N6: (53.723,110.519,55.668)
N7: (54.287,109.105,58.359)
N9: (52.565,108.710,59.764)
O5': (54.317,109.462,62.786)
O3': (50.657,107.250,63.466)
Image (generated by PyMOL):