Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YFG:A73:A74
Extra
PDB:
ATOM 1 O3' C A 72 -8.063 1.832 9.476 1.00 60.41 O
ATOM 2 P C A 73 -8.176 0.689 10.555 1.00 59.61 P
ATOM 3 OP1 C A 73 -8.756 1.359 11.797 1.00 59.81 O
ATOM 4 OP2 C A 73 -6.795 0.108 10.732 1.00 59.53 O
ATOM 5 O5' C A 73 -9.177 -0.374 9.940 1.00 58.19 O
ATOM 6 C5' C A 73 -9.109 -1.714 10.527 1.00 56.36 C
ATOM 7 C4' C A 73 -10.024 -2.551 9.653 1.00 54.87 C
ATOM 8 O4' C A 73 -9.865 -2.137 8.315 1.00 54.36 O
ATOM 9 C3' C A 73 -9.717 -4.048 9.681 1.00 54.01 C
ATOM 10 O3' C A 73 -10.394 -4.727 10.732 1.00 53.08 O
ATOM 11 C2' C A 73 -10.229 -4.481 8.302 1.00 53.93 C
ATOM 12 O2' C A 73 -11.639 -4.658 8.452 1.00 53.80 O
ATOM 13 C1' C A 73 -9.922 -3.280 7.441 1.00 53.85 C
ATOM 14 N1 C A 73 -8.626 -3.417 6.759 1.00 53.58 N
ATOM 15 C2 C A 73 -8.660 -3.989 5.489 1.00 53.64 C
ATOM 16 O2 C A 73 -9.751 -4.343 5.025 1.00 53.76 O
ATOM 17 N3 C A 73 -7.488 -4.126 4.820 1.00 53.60 N
ATOM 18 C4 C A 73 -6.294 -3.733 5.339 1.00 53.50 C
ATOM 19 N4 C A 73 -5.186 -3.900 4.615 1.00 53.44 N
ATOM 20 C5 C A 73 -6.272 -3.142 6.636 1.00 53.48 C
ATOM 21 C6 C A 73 -7.437 -3.014 7.278 1.00 53.52 C
ATOM 22 P A A 74 -9.524 -5.308 11.947 1.00 52.39 P
ATOM 23 OP1 A A 74 -10.360 -5.870 13.040 1.00 52.43 O
ATOM 24 OP2 A A 74 -8.540 -4.274 12.207 1.00 52.37 O
ATOM 25 O5' A A 74 -8.870 -6.598 11.278 1.00 52.23 O
TER
ATOM 1 O3' C B 73 -10.394 -4.727 10.732 1.00 53.08 O
ATOM 2 P A B 74 -9.524 -5.308 11.947 1.00 52.39 P
ATOM 3 OP1 A B 74 -10.360 -5.870 13.040 1.00 52.43 O
ATOM 4 OP2 A B 74 -8.540 -4.274 12.207 1.00 52.37 O
ATOM 5 O5' A B 74 -8.870 -6.598 11.278 1.00 52.23 O
ATOM 6 C5' A B 74 -9.774 -7.199 10.309 1.00 51.72 C
ATOM 7 C4' A B 74 -8.899 -7.692 9.216 1.00 51.32 C
ATOM 8 O4' A B 74 -8.330 -6.667 8.425 1.00 51.37 O
ATOM 9 C3' A B 74 -7.727 -8.598 9.530 1.00 50.99 C
ATOM 10 O3' A B 74 -8.137 -9.878 10.008 1.00 50.77 O
ATOM 11 C2' A B 74 -7.085 -8.667 8.151 1.00 51.08 C
ATOM 12 O2' A B 74 -7.710 -9.691 7.428 1.00 50.94 O
ATOM 13 C1' A B 74 -7.392 -7.268 7.564 1.00 51.41 C
ATOM 14 N9 A B 74 -6.124 -6.687 7.209 1.00 51.67 N
ATOM 15 C8 A B 74 -5.515 -6.736 5.967 1.00 51.85 C
ATOM 16 N7 A B 74 -4.350 -6.136 5.899 1.00 51.82 N
ATOM 17 C5 A B 74 -4.185 -5.653 7.196 1.00 51.69 C
ATOM 18 C6 A B 74 -3.139 -4.905 7.769 1.00 51.76 C
ATOM 19 N6 A B 74 -2.047 -4.530 7.127 1.00 51.88 N
ATOM 20 N1 A B 74 -3.321 -4.609 9.080 1.00 51.89 N
ATOM 21 C2 A B 74 -4.435 -5.003 9.763 1.00 51.86 C
ATOM 22 N3 A B 74 -5.459 -5.692 9.285 1.00 51.60 N
ATOM 23 C4 A B 74 -5.260 -5.978 8.001 1.00 51.63 C
TER
ATOM 2 P C A 73 -8.176 0.689 10.555 1.00 59.61 P
ATOM 3 OP1 C A 73 -8.756 1.359 11.797 1.00 59.81 O
ATOM 4 OP2 C A 73 -6.795 0.108 10.732 1.00 59.53 O
ATOM 5 O5' C A 73 -9.177 -0.374 9.940 1.00 58.19 O
ATOM 6 C5' C A 73 -9.109 -1.714 10.527 1.00 56.36 C
ATOM 7 C4' C A 73 -10.024 -2.551 9.653 1.00 54.87 C
ATOM 8 O4' C A 73 -9.865 -2.137 8.315 1.00 54.36 O
ATOM 9 C3' C A 73 -9.717 -4.048 9.681 1.00 54.01 C
ATOM 10 O3' C A 73 -10.394 -4.727 10.732 1.00 53.08 O
ATOM 11 C2' C A 73 -10.229 -4.481 8.302 1.00 53.93 C
ATOM 12 O2' C A 73 -11.639 -4.658 8.452 1.00 53.80 O
ATOM 13 C1' C A 73 -9.922 -3.280 7.441 1.00 53.85 C
ATOM 14 N1 C A 73 -8.626 -3.417 6.759 1.00 53.58 N
ATOM 15 C2 C A 73 -8.660 -3.989 5.489 1.00 53.64 C
ATOM 16 O2 C A 73 -9.751 -4.343 5.025 1.00 53.76 O
ATOM 17 N3 C A 73 -7.488 -4.126 4.820 1.00 53.60 N
ATOM 18 C4 C A 73 -6.294 -3.733 5.339 1.00 53.50 C
ATOM 19 N4 C A 73 -5.186 -3.900 4.615 1.00 53.44 N
ATOM 20 C5 C A 73 -6.272 -3.142 6.636 1.00 53.48 C
ATOM 21 C6 C A 73 -7.437 -3.014 7.278 1.00 53.52 C
ATOM 22 P A A 74 -9.524 -5.308 11.947 1.00 52.39 P
ATOM 23 OP1 A A 74 -10.360 -5.870 13.040 1.00 52.43 O
ATOM 24 OP2 A A 74 -8.540 -4.274 12.207 1.00 52.37 O
ATOM 25 O5' A A 74 -8.870 -6.598 11.278 1.00 52.23 O
TER
ATOM 1 O3' C B 73 -10.394 -4.727 10.732 1.00 53.08 O
ATOM 2 P A B 74 -9.524 -5.308 11.947 1.00 52.39 P
ATOM 3 OP1 A B 74 -10.360 -5.870 13.040 1.00 52.43 O
ATOM 4 OP2 A B 74 -8.540 -4.274 12.207 1.00 52.37 O
ATOM 5 O5' A B 74 -8.870 -6.598 11.278 1.00 52.23 O
ATOM 6 C5' A B 74 -9.774 -7.199 10.309 1.00 51.72 C
ATOM 7 C4' A B 74 -8.899 -7.692 9.216 1.00 51.32 C
ATOM 8 O4' A B 74 -8.330 -6.667 8.425 1.00 51.37 O
ATOM 9 C3' A B 74 -7.727 -8.598 9.530 1.00 50.99 C
ATOM 10 O3' A B 74 -8.137 -9.878 10.008 1.00 50.77 O
ATOM 11 C2' A B 74 -7.085 -8.667 8.151 1.00 51.08 C
ATOM 12 O2' A B 74 -7.710 -9.691 7.428 1.00 50.94 O
ATOM 13 C1' A B 74 -7.392 -7.268 7.564 1.00 51.41 C
ATOM 14 N9 A B 74 -6.124 -6.687 7.209 1.00 51.67 N
ATOM 15 C8 A B 74 -5.515 -6.736 5.967 1.00 51.85 C
ATOM 16 N7 A B 74 -4.350 -6.136 5.899 1.00 51.82 N
ATOM 17 C5 A B 74 -4.185 -5.653 7.196 1.00 51.69 C
ATOM 18 C6 A B 74 -3.139 -4.905 7.769 1.00 51.76 C
ATOM 19 N6 A B 74 -2.047 -4.530 7.127 1.00 51.88 N
ATOM 20 N1 A B 74 -3.321 -4.609 9.080 1.00 51.89 N
ATOM 21 C2 A B 74 -4.435 -5.003 9.763 1.00 51.86 C
ATOM 22 N3 A B 74 -5.459 -5.692 9.285 1.00 51.60 N
ATOM 23 C4 A B 74 -5.260 -5.978 8.001 1.00 51.63 C
TER
Atoms:
C2: (-8.660,-3.989,5.489)
OP1: (-8.756,1.359,11.797)
OP2: (-6.795,0.108,10.732)
C4: (-6.294,-3.733,5.339)
O5': (-9.177,-0.374,9.940)
C3': (-9.717,-4.048,9.681)
C1': (-9.922,-3.280,7.441)
O4': (-9.865,-2.137,8.315)
C5': (-9.109,-1.714,10.527)
P: (-8.176,0.689,10.555)
O2: (-9.751,-4.343,5.025)
C4': (-10.024,-2.551,9.653)
C2': (-10.229,-4.481,8.302)
O2': (-11.639,-4.658,8.452)
N1: (-8.626,-3.417,6.759)
N3: (-7.488,-4.126,4.820)
N4: (-5.186,-3.900,4.615)
C6: (-7.437,-3.014,7.278)
C5: (-6.272,-3.142,6.636)
O3': (-10.394,-4.727,10.732)
OP1: (-8.756,1.359,11.797)
OP2: (-6.795,0.108,10.732)
C4: (-6.294,-3.733,5.339)
O5': (-9.177,-0.374,9.940)
C3': (-9.717,-4.048,9.681)
C1': (-9.922,-3.280,7.441)
O4': (-9.865,-2.137,8.315)
C5': (-9.109,-1.714,10.527)
P: (-8.176,0.689,10.555)
O2: (-9.751,-4.343,5.025)
C4': (-10.024,-2.551,9.653)
C2': (-10.229,-4.481,8.302)
O2': (-11.639,-4.658,8.452)
N1: (-8.626,-3.417,6.759)
N3: (-7.488,-4.126,4.820)
N4: (-5.186,-3.900,4.615)
C6: (-7.437,-3.014,7.278)
C5: (-6.272,-3.142,6.636)
O3': (-10.394,-4.727,10.732)
OP1: (-10.360,-5.870,13.040)
OP2: (-8.540,-4.274,12.207)
C3': (-7.727,-8.598,9.530)
C1': (-7.392,-7.268,7.564)
C5': (-9.774,-7.199,10.309)
O4': (-8.330,-6.667,8.425)
C8: (-5.515,-6.736,5.967)
O2': (-7.710,-9.691,7.428)
C6: (-3.139,-4.905,7.769)
C5: (-4.185,-5.653,7.196)
C4: (-5.260,-5.978,8.001)
P: (-9.524,-5.308,11.947)
C4': (-8.899,-7.692,9.216)
C2': (-7.085,-8.667,8.151)
C2: (-4.435,-5.003,9.763)
N1: (-3.321,-4.609,9.080)
N3: (-5.459,-5.692,9.285)
N6: (-2.047,-4.530,7.127)
N7: (-4.350,-6.136,5.899)
N9: (-6.124,-6.687,7.209)
O5': (-8.870,-6.598,11.278)
O3': (-8.137,-9.878,10.008)
OP2: (-8.540,-4.274,12.207)
C3': (-7.727,-8.598,9.530)
C1': (-7.392,-7.268,7.564)
C5': (-9.774,-7.199,10.309)
O4': (-8.330,-6.667,8.425)
C8: (-5.515,-6.736,5.967)
O2': (-7.710,-9.691,7.428)
C6: (-3.139,-4.905,7.769)
C5: (-4.185,-5.653,7.196)
C4: (-5.260,-5.978,8.001)
P: (-9.524,-5.308,11.947)
C4': (-8.899,-7.692,9.216)
C2': (-7.085,-8.667,8.151)
C2: (-4.435,-5.003,9.763)
N1: (-3.321,-4.609,9.080)
N3: (-5.459,-5.692,9.285)
N6: (-2.047,-4.530,7.127)
N7: (-4.350,-6.136,5.899)
N9: (-6.124,-6.687,7.209)
O5': (-8.870,-6.598,11.278)
O3': (-8.137,-9.878,10.008)
Image (generated by PyMOL):