Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01581:01582
Extra
PDB:
ATOM 1 O3' G A1580 99.848 203.656 55.551 1.00 73.39 O
ATOM 2 P C A1581 98.281 203.833 55.857 1.00 75.65 P
ATOM 3 OP1 C A1581 97.717 204.814 54.899 1.00 77.03 O
ATOM 4 OP2 C A1581 98.162 204.084 57.315 1.00 74.59 O
ATOM 5 O5' C A1581 97.666 202.403 55.523 1.00 75.96 O
ATOM 6 C5' C A1581 97.774 201.847 54.196 1.00 75.90 C
ATOM 7 C4' C A1581 97.247 200.433 54.178 1.00 76.04 C
ATOM 8 O4' C A1581 98.125 199.570 54.942 1.00 75.15 O
ATOM 9 C3' C A1581 95.870 200.252 54.796 1.00 76.34 C
ATOM 10 O3' C A1581 94.877 200.518 53.813 1.00 77.79 O
ATOM 11 C2' C A1581 95.888 198.789 55.221 1.00 75.94 C
ATOM 12 O2' C A1581 95.608 197.919 54.140 1.00 75.81 O
ATOM 13 C1' C A1581 97.354 198.609 55.639 1.00 75.40 C
ATOM 14 N1 C A1581 97.626 198.770 57.077 1.00 73.80 N
ATOM 15 C2 C A1581 97.617 197.643 57.902 1.00 73.16 C
ATOM 16 O2 C A1581 97.351 196.539 57.411 1.00 72.65 O
ATOM 17 N3 C A1581 97.899 197.786 59.216 1.00 73.49 N
ATOM 18 C4 C A1581 98.178 198.994 59.712 1.00 73.12 C
ATOM 19 N4 C A1581 98.461 199.089 61.012 1.00 73.24 N
ATOM 20 C5 C A1581 98.181 200.158 58.897 1.00 73.14 C
ATOM 21 C6 C A1581 97.900 200.003 57.600 1.00 73.37 C
ATOM 22 P A A1582 93.476 201.173 54.238 1.00 79.51 P
ATOM 23 OP1 A A1582 92.706 200.207 55.062 1.00 79.70 O
ATOM 24 OP2 A A1582 92.882 201.710 52.992 1.00 78.41 O
ATOM 25 O5' A A1582 93.878 202.403 55.163 1.00 82.08 O
TER
ATOM 1 O3' C B1581 94.877 200.518 53.813 1.00 77.79 O
ATOM 2 P A B1582 93.476 201.173 54.238 1.00 79.51 P
ATOM 3 OP1 A B1582 92.706 200.207 55.062 1.00 79.70 O
ATOM 4 OP2 A B1582 92.882 201.710 52.992 1.00 78.41 O
ATOM 5 O5' A B1582 93.878 202.403 55.163 1.00 82.08 O
ATOM 6 C5' A B1582 92.908 203.409 55.495 1.00 85.54 C
ATOM 7 C4' A B1582 93.139 203.924 56.896 1.00 87.84 C
ATOM 8 O4' A B1582 92.946 202.834 57.844 1.00 86.86 O
ATOM 9 C3' A B1582 94.525 204.506 57.183 1.00 89.79 C
ATOM 10 O3' A B1582 94.403 205.576 58.118 1.00 94.52 O
ATOM 11 C2' A B1582 95.233 203.339 57.860 1.00 88.63 C
ATOM 12 O2' A B1582 96.269 203.743 58.732 1.00 89.31 O
ATOM 13 C1' A B1582 94.091 202.723 58.664 1.00 87.05 C
ATOM 14 N9 A B1582 94.326 201.316 58.994 1.00 85.58 N
ATOM 15 C8 A B1582 94.335 200.218 58.165 1.00 85.24 C
ATOM 16 N7 A B1582 94.658 199.102 58.773 1.00 84.31 N
ATOM 17 C5 A B1582 94.858 199.486 60.093 1.00 83.72 C
ATOM 18 C6 A B1582 95.241 198.770 61.247 1.00 83.37 C
ATOM 19 N6 A B1582 95.513 197.462 61.257 1.00 82.29 N
ATOM 20 N1 A B1582 95.344 199.457 62.405 1.00 83.68 N
ATOM 21 C2 A B1582 95.088 200.771 62.396 1.00 83.61 C
ATOM 22 N3 A B1582 94.732 201.554 61.382 1.00 83.38 N
ATOM 23 C4 A B1582 94.636 200.843 60.246 1.00 84.25 C
ATOM 24 P U B1583 94.879 207.063 57.720 1.00 96.53 P
ATOM 25 OP1 U B1583 95.006 207.179 56.240 1.00 95.27 O
ATOM 26 OP2 U B1583 96.034 207.414 58.586 1.00 96.61 O
ATOM 27 O5' U B1583 93.648 207.951 58.189 1.00 99.51 O
TER
ATOM 2 P C A1581 98.281 203.833 55.857 1.00 75.65 P
ATOM 3 OP1 C A1581 97.717 204.814 54.899 1.00 77.03 O
ATOM 4 OP2 C A1581 98.162 204.084 57.315 1.00 74.59 O
ATOM 5 O5' C A1581 97.666 202.403 55.523 1.00 75.96 O
ATOM 6 C5' C A1581 97.774 201.847 54.196 1.00 75.90 C
ATOM 7 C4' C A1581 97.247 200.433 54.178 1.00 76.04 C
ATOM 8 O4' C A1581 98.125 199.570 54.942 1.00 75.15 O
ATOM 9 C3' C A1581 95.870 200.252 54.796 1.00 76.34 C
ATOM 10 O3' C A1581 94.877 200.518 53.813 1.00 77.79 O
ATOM 11 C2' C A1581 95.888 198.789 55.221 1.00 75.94 C
ATOM 12 O2' C A1581 95.608 197.919 54.140 1.00 75.81 O
ATOM 13 C1' C A1581 97.354 198.609 55.639 1.00 75.40 C
ATOM 14 N1 C A1581 97.626 198.770 57.077 1.00 73.80 N
ATOM 15 C2 C A1581 97.617 197.643 57.902 1.00 73.16 C
ATOM 16 O2 C A1581 97.351 196.539 57.411 1.00 72.65 O
ATOM 17 N3 C A1581 97.899 197.786 59.216 1.00 73.49 N
ATOM 18 C4 C A1581 98.178 198.994 59.712 1.00 73.12 C
ATOM 19 N4 C A1581 98.461 199.089 61.012 1.00 73.24 N
ATOM 20 C5 C A1581 98.181 200.158 58.897 1.00 73.14 C
ATOM 21 C6 C A1581 97.900 200.003 57.600 1.00 73.37 C
ATOM 22 P A A1582 93.476 201.173 54.238 1.00 79.51 P
ATOM 23 OP1 A A1582 92.706 200.207 55.062 1.00 79.70 O
ATOM 24 OP2 A A1582 92.882 201.710 52.992 1.00 78.41 O
ATOM 25 O5' A A1582 93.878 202.403 55.163 1.00 82.08 O
TER
ATOM 1 O3' C B1581 94.877 200.518 53.813 1.00 77.79 O
ATOM 2 P A B1582 93.476 201.173 54.238 1.00 79.51 P
ATOM 3 OP1 A B1582 92.706 200.207 55.062 1.00 79.70 O
ATOM 4 OP2 A B1582 92.882 201.710 52.992 1.00 78.41 O
ATOM 5 O5' A B1582 93.878 202.403 55.163 1.00 82.08 O
ATOM 6 C5' A B1582 92.908 203.409 55.495 1.00 85.54 C
ATOM 7 C4' A B1582 93.139 203.924 56.896 1.00 87.84 C
ATOM 8 O4' A B1582 92.946 202.834 57.844 1.00 86.86 O
ATOM 9 C3' A B1582 94.525 204.506 57.183 1.00 89.79 C
ATOM 10 O3' A B1582 94.403 205.576 58.118 1.00 94.52 O
ATOM 11 C2' A B1582 95.233 203.339 57.860 1.00 88.63 C
ATOM 12 O2' A B1582 96.269 203.743 58.732 1.00 89.31 O
ATOM 13 C1' A B1582 94.091 202.723 58.664 1.00 87.05 C
ATOM 14 N9 A B1582 94.326 201.316 58.994 1.00 85.58 N
ATOM 15 C8 A B1582 94.335 200.218 58.165 1.00 85.24 C
ATOM 16 N7 A B1582 94.658 199.102 58.773 1.00 84.31 N
ATOM 17 C5 A B1582 94.858 199.486 60.093 1.00 83.72 C
ATOM 18 C6 A B1582 95.241 198.770 61.247 1.00 83.37 C
ATOM 19 N6 A B1582 95.513 197.462 61.257 1.00 82.29 N
ATOM 20 N1 A B1582 95.344 199.457 62.405 1.00 83.68 N
ATOM 21 C2 A B1582 95.088 200.771 62.396 1.00 83.61 C
ATOM 22 N3 A B1582 94.732 201.554 61.382 1.00 83.38 N
ATOM 23 C4 A B1582 94.636 200.843 60.246 1.00 84.25 C
ATOM 24 P U B1583 94.879 207.063 57.720 1.00 96.53 P
ATOM 25 OP1 U B1583 95.006 207.179 56.240 1.00 95.27 O
ATOM 26 OP2 U B1583 96.034 207.414 58.586 1.00 96.61 O
ATOM 27 O5' U B1583 93.648 207.951 58.189 1.00 99.51 O
TER
Atoms:
C2: (97.617,197.643,57.902)
OP1: (97.717,204.814,54.899)
OP2: (98.162,204.084,57.315)
C4: (98.178,198.994,59.712)
O5': (97.666,202.403,55.523)
C3': (95.870,200.252,54.796)
C1': (97.354,198.609,55.639)
O4': (98.125,199.570,54.942)
C5': (97.774,201.847,54.196)
P: (98.281,203.833,55.857)
O2: (97.351,196.539,57.411)
C4': (97.247,200.433,54.178)
C2': (95.888,198.789,55.221)
O2': (95.608,197.919,54.140)
N1: (97.626,198.770,57.077)
N3: (97.899,197.786,59.216)
N4: (98.461,199.089,61.012)
C6: (97.900,200.003,57.600)
C5: (98.181,200.158,58.897)
O3': (94.877,200.518,53.813)
OP1: (97.717,204.814,54.899)
OP2: (98.162,204.084,57.315)
C4: (98.178,198.994,59.712)
O5': (97.666,202.403,55.523)
C3': (95.870,200.252,54.796)
C1': (97.354,198.609,55.639)
O4': (98.125,199.570,54.942)
C5': (97.774,201.847,54.196)
P: (98.281,203.833,55.857)
O2: (97.351,196.539,57.411)
C4': (97.247,200.433,54.178)
C2': (95.888,198.789,55.221)
O2': (95.608,197.919,54.140)
N1: (97.626,198.770,57.077)
N3: (97.899,197.786,59.216)
N4: (98.461,199.089,61.012)
C6: (97.900,200.003,57.600)
C5: (98.181,200.158,58.897)
O3': (94.877,200.518,53.813)
OP1: (92.706,200.207,55.062)
OP2: (92.882,201.710,52.992)
C3': (94.525,204.506,57.183)
C1': (94.091,202.723,58.664)
C5': (92.908,203.409,55.495)
O4': (92.946,202.834,57.844)
C8: (94.335,200.218,58.165)
O2': (96.269,203.743,58.732)
C6: (95.241,198.770,61.247)
C5: (94.858,199.486,60.093)
C4: (94.636,200.843,60.246)
P: (93.476,201.173,54.238)
C4': (93.139,203.924,56.896)
C2': (95.233,203.339,57.860)
C2: (95.088,200.771,62.396)
N1: (95.344,199.457,62.405)
N3: (94.732,201.554,61.382)
N6: (95.513,197.462,61.257)
N7: (94.658,199.102,58.773)
N9: (94.326,201.316,58.994)
O5': (93.878,202.403,55.163)
O3': (94.403,205.576,58.118)
OP2: (92.882,201.710,52.992)
C3': (94.525,204.506,57.183)
C1': (94.091,202.723,58.664)
C5': (92.908,203.409,55.495)
O4': (92.946,202.834,57.844)
C8: (94.335,200.218,58.165)
O2': (96.269,203.743,58.732)
C6: (95.241,198.770,61.247)
C5: (94.858,199.486,60.093)
C4: (94.636,200.843,60.246)
P: (93.476,201.173,54.238)
C4': (93.139,203.924,56.896)
C2': (95.233,203.339,57.860)
C2: (95.088,200.771,62.396)
N1: (95.344,199.457,62.405)
N3: (94.732,201.554,61.382)
N6: (95.513,197.462,61.257)
N7: (94.658,199.102,58.773)
N9: (94.326,201.316,58.994)
O5': (93.878,202.403,55.163)
O3': (94.403,205.576,58.118)
Image (generated by PyMOL):