Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0574:0575
Extra
PDB:
ATOM 1 O3' C A 573 -10.769 83.559 116.311 1.00 65.46 O
ATOM 2 P C A 574 -10.781 84.359 114.915 1.00 65.99 P
ATOM 3 OP1 C A 574 -11.819 83.744 114.050 1.00 65.40 O
ATOM 4 OP2 C A 574 -9.382 84.438 114.429 1.00 67.51 O
ATOM 5 O5' C A 574 -11.271 85.825 115.307 1.00 64.72 O
ATOM 6 C5' C A 574 -12.624 86.061 115.716 1.00 63.71 C
ATOM 7 C4' C A 574 -12.764 87.447 116.294 1.00 65.15 C
ATOM 8 O4' C A 574 -11.851 87.600 117.410 1.00 66.37 O
ATOM 9 C3' C A 574 -12.408 88.601 115.375 1.00 66.27 C
ATOM 10 O3' C A 574 -13.497 88.921 114.514 1.00 68.46 O
ATOM 11 C2' C A 574 -12.114 89.723 116.365 1.00 66.38 C
ATOM 12 O2' C A 574 -13.281 90.338 116.874 1.00 66.15 O
ATOM 13 C1' C A 574 -11.426 88.954 117.496 1.00 66.10 C
ATOM 14 N1 C A 574 -9.947 89.000 117.451 1.00 65.92 N
ATOM 15 C2 C A 574 -9.278 90.093 118.046 1.00 65.44 C
ATOM 16 O2 C A 574 -9.946 91.002 118.575 1.00 63.62 O
ATOM 17 N3 C A 574 -7.924 90.128 118.019 1.00 65.00 N
ATOM 18 C4 C A 574 -7.240 89.144 117.422 1.00 65.21 C
ATOM 19 N4 C A 574 -5.906 89.225 117.410 1.00 64.92 N
ATOM 20 C5 C A 574 -7.893 88.034 116.807 1.00 64.49 C
ATOM 21 C6 C A 574 -9.230 88.001 116.846 1.00 65.23 C
ATOM 22 P A A 575 -13.212 89.480 113.033 1.00 69.70 P
ATOM 23 OP1 A A 575 -12.623 90.839 113.158 1.00 69.45 O
ATOM 24 OP2 A A 575 -14.465 89.298 112.254 1.00 70.64 O
ATOM 25 O5' A A 575 -12.114 88.483 112.443 1.00 66.96 O
TER
ATOM 1 O3' C B 574 -13.497 88.921 114.514 1.00 68.46 O
ATOM 2 P A B 575 -13.212 89.480 113.033 1.00 69.70 P
ATOM 3 OP1 A B 575 -12.623 90.839 113.158 1.00 69.45 O
ATOM 4 OP2 A B 575 -14.465 89.298 112.254 1.00 70.64 O
ATOM 5 O5' A B 575 -12.114 88.483 112.443 1.00 66.96 O
ATOM 6 C5' A B 575 -11.972 88.303 111.020 1.00 65.99 C
ATOM 7 C4' A B 575 -10.528 88.020 110.655 1.00 64.74 C
ATOM 8 O4' A B 575 -9.698 89.132 111.093 1.00 64.46 O
ATOM 9 C3' A B 575 -9.892 86.766 111.247 1.00 64.14 C
ATOM 10 O3' A B 575 -8.956 86.264 110.305 1.00 63.45 O
ATOM 11 C2' A B 575 -9.153 87.312 112.466 1.00 64.16 C
ATOM 12 O2' A B 575 -8.053 86.513 112.853 1.00 65.00 O
ATOM 13 C1' A B 575 -8.667 88.655 111.934 1.00 62.88 C
ATOM 14 N9 A B 575 -8.393 89.668 112.953 1.00 61.86 N
ATOM 15 C8 A B 575 -9.284 90.478 113.614 1.00 61.17 C
ATOM 16 N7 A B 575 -8.718 91.319 114.445 1.00 61.03 N
ATOM 17 C5 A B 575 -7.363 91.040 114.332 1.00 61.08 C
ATOM 18 C6 A B 575 -6.226 91.594 114.951 1.00 60.70 C
ATOM 19 N6 A B 575 -6.276 92.586 115.845 1.00 60.99 N
ATOM 20 N1 A B 575 -5.019 91.087 114.616 1.00 59.95 N
ATOM 21 C2 A B 575 -4.968 90.093 113.721 1.00 60.92 C
ATOM 22 N3 A B 575 -5.961 89.489 113.072 1.00 61.87 N
ATOM 23 C4 A B 575 -7.148 90.017 113.425 1.00 61.90 C
ATOM 24 P G B 576 -9.231 84.862 109.574 1.00 65.98 P
ATOM 25 OP1 G B 576 -10.696 84.625 109.617 1.00 68.24 O
ATOM 26 OP2 G B 576 -8.305 83.845 110.135 1.00 64.96 O
ATOM 27 O5' G B 576 -8.845 85.134 108.048 1.00 65.22 O
TER
ATOM 2 P C A 574 -10.781 84.359 114.915 1.00 65.99 P
ATOM 3 OP1 C A 574 -11.819 83.744 114.050 1.00 65.40 O
ATOM 4 OP2 C A 574 -9.382 84.438 114.429 1.00 67.51 O
ATOM 5 O5' C A 574 -11.271 85.825 115.307 1.00 64.72 O
ATOM 6 C5' C A 574 -12.624 86.061 115.716 1.00 63.71 C
ATOM 7 C4' C A 574 -12.764 87.447 116.294 1.00 65.15 C
ATOM 8 O4' C A 574 -11.851 87.600 117.410 1.00 66.37 O
ATOM 9 C3' C A 574 -12.408 88.601 115.375 1.00 66.27 C
ATOM 10 O3' C A 574 -13.497 88.921 114.514 1.00 68.46 O
ATOM 11 C2' C A 574 -12.114 89.723 116.365 1.00 66.38 C
ATOM 12 O2' C A 574 -13.281 90.338 116.874 1.00 66.15 O
ATOM 13 C1' C A 574 -11.426 88.954 117.496 1.00 66.10 C
ATOM 14 N1 C A 574 -9.947 89.000 117.451 1.00 65.92 N
ATOM 15 C2 C A 574 -9.278 90.093 118.046 1.00 65.44 C
ATOM 16 O2 C A 574 -9.946 91.002 118.575 1.00 63.62 O
ATOM 17 N3 C A 574 -7.924 90.128 118.019 1.00 65.00 N
ATOM 18 C4 C A 574 -7.240 89.144 117.422 1.00 65.21 C
ATOM 19 N4 C A 574 -5.906 89.225 117.410 1.00 64.92 N
ATOM 20 C5 C A 574 -7.893 88.034 116.807 1.00 64.49 C
ATOM 21 C6 C A 574 -9.230 88.001 116.846 1.00 65.23 C
ATOM 22 P A A 575 -13.212 89.480 113.033 1.00 69.70 P
ATOM 23 OP1 A A 575 -12.623 90.839 113.158 1.00 69.45 O
ATOM 24 OP2 A A 575 -14.465 89.298 112.254 1.00 70.64 O
ATOM 25 O5' A A 575 -12.114 88.483 112.443 1.00 66.96 O
TER
ATOM 1 O3' C B 574 -13.497 88.921 114.514 1.00 68.46 O
ATOM 2 P A B 575 -13.212 89.480 113.033 1.00 69.70 P
ATOM 3 OP1 A B 575 -12.623 90.839 113.158 1.00 69.45 O
ATOM 4 OP2 A B 575 -14.465 89.298 112.254 1.00 70.64 O
ATOM 5 O5' A B 575 -12.114 88.483 112.443 1.00 66.96 O
ATOM 6 C5' A B 575 -11.972 88.303 111.020 1.00 65.99 C
ATOM 7 C4' A B 575 -10.528 88.020 110.655 1.00 64.74 C
ATOM 8 O4' A B 575 -9.698 89.132 111.093 1.00 64.46 O
ATOM 9 C3' A B 575 -9.892 86.766 111.247 1.00 64.14 C
ATOM 10 O3' A B 575 -8.956 86.264 110.305 1.00 63.45 O
ATOM 11 C2' A B 575 -9.153 87.312 112.466 1.00 64.16 C
ATOM 12 O2' A B 575 -8.053 86.513 112.853 1.00 65.00 O
ATOM 13 C1' A B 575 -8.667 88.655 111.934 1.00 62.88 C
ATOM 14 N9 A B 575 -8.393 89.668 112.953 1.00 61.86 N
ATOM 15 C8 A B 575 -9.284 90.478 113.614 1.00 61.17 C
ATOM 16 N7 A B 575 -8.718 91.319 114.445 1.00 61.03 N
ATOM 17 C5 A B 575 -7.363 91.040 114.332 1.00 61.08 C
ATOM 18 C6 A B 575 -6.226 91.594 114.951 1.00 60.70 C
ATOM 19 N6 A B 575 -6.276 92.586 115.845 1.00 60.99 N
ATOM 20 N1 A B 575 -5.019 91.087 114.616 1.00 59.95 N
ATOM 21 C2 A B 575 -4.968 90.093 113.721 1.00 60.92 C
ATOM 22 N3 A B 575 -5.961 89.489 113.072 1.00 61.87 N
ATOM 23 C4 A B 575 -7.148 90.017 113.425 1.00 61.90 C
ATOM 24 P G B 576 -9.231 84.862 109.574 1.00 65.98 P
ATOM 25 OP1 G B 576 -10.696 84.625 109.617 1.00 68.24 O
ATOM 26 OP2 G B 576 -8.305 83.845 110.135 1.00 64.96 O
ATOM 27 O5' G B 576 -8.845 85.134 108.048 1.00 65.22 O
TER
Atoms:
C2: (-9.278,90.093,118.046)
OP1: (-11.819,83.744,114.050)
OP2: (-9.382,84.438,114.429)
C4: (-7.240,89.144,117.422)
O5': (-11.271,85.825,115.307)
C3': (-12.408,88.601,115.375)
C1': (-11.426,88.954,117.496)
O4': (-11.851,87.600,117.410)
C5': (-12.624,86.061,115.716)
P: (-10.781,84.359,114.915)
O2: (-9.946,91.002,118.575)
C4': (-12.764,87.447,116.294)
C2': (-12.114,89.723,116.365)
O2': (-13.281,90.338,116.874)
N1: (-9.947,89.000,117.451)
N3: (-7.924,90.128,118.019)
N4: (-5.906,89.225,117.410)
C6: (-9.230,88.001,116.846)
C5: (-7.893,88.034,116.807)
O3': (-13.497,88.921,114.514)
OP1: (-11.819,83.744,114.050)
OP2: (-9.382,84.438,114.429)
C4: (-7.240,89.144,117.422)
O5': (-11.271,85.825,115.307)
C3': (-12.408,88.601,115.375)
C1': (-11.426,88.954,117.496)
O4': (-11.851,87.600,117.410)
C5': (-12.624,86.061,115.716)
P: (-10.781,84.359,114.915)
O2: (-9.946,91.002,118.575)
C4': (-12.764,87.447,116.294)
C2': (-12.114,89.723,116.365)
O2': (-13.281,90.338,116.874)
N1: (-9.947,89.000,117.451)
N3: (-7.924,90.128,118.019)
N4: (-5.906,89.225,117.410)
C6: (-9.230,88.001,116.846)
C5: (-7.893,88.034,116.807)
O3': (-13.497,88.921,114.514)
OP1: (-12.623,90.839,113.158)
OP2: (-14.465,89.298,112.254)
C3': (-9.892,86.766,111.247)
C1': (-8.667,88.655,111.934)
C5': (-11.972,88.303,111.020)
O4': (-9.698,89.132,111.093)
C8: (-9.284,90.478,113.614)
O2': (-8.053,86.513,112.853)
C6: (-6.226,91.594,114.951)
C5: (-7.363,91.040,114.332)
C4: (-7.148,90.017,113.425)
P: (-13.212,89.480,113.033)
C4': (-10.528,88.020,110.655)
C2': (-9.153,87.312,112.466)
C2: (-4.968,90.093,113.721)
N1: (-5.019,91.087,114.616)
N3: (-5.961,89.489,113.072)
N6: (-6.276,92.586,115.845)
N7: (-8.718,91.319,114.445)
N9: (-8.393,89.668,112.953)
O5': (-12.114,88.483,112.443)
O3': (-8.956,86.264,110.305)
OP2: (-14.465,89.298,112.254)
C3': (-9.892,86.766,111.247)
C1': (-8.667,88.655,111.934)
C5': (-11.972,88.303,111.020)
O4': (-9.698,89.132,111.093)
C8: (-9.284,90.478,113.614)
O2': (-8.053,86.513,112.853)
C6: (-6.226,91.594,114.951)
C5: (-7.363,91.040,114.332)
C4: (-7.148,90.017,113.425)
P: (-13.212,89.480,113.033)
C4': (-10.528,88.020,110.655)
C2': (-9.153,87.312,112.466)
C2: (-4.968,90.093,113.721)
N1: (-5.019,91.087,114.616)
N3: (-5.961,89.489,113.072)
N6: (-6.276,92.586,115.845)
N7: (-8.718,91.319,114.445)
N9: (-8.393,89.668,112.953)
O5': (-12.114,88.483,112.443)
O3': (-8.956,86.264,110.305)
Image (generated by PyMOL):