ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1GID:A19:A95

Extra

PDB:
ATOM 1 O3' C A 18 11.598 46.850 55.448 1.00 72.07 O
ATOM 2 P A A 19 10.135 46.368 55.000 1.00 72.55 P
ATOM 3 OP1 A A 19 9.737 47.311 53.909 1.00 74.15 O
ATOM 4 OP2 A A 19 9.299 46.258 56.221 1.00 73.00 O
ATOM 5 O5' A A 19 10.342 44.884 54.453 1.00 69.92 O
ATOM 6 C5' A A 19 10.177 44.613 53.076 1.00 72.94 C
ATOM 7 C4' A A 19 11.270 45.299 52.310 1.00 75.49 C
ATOM 8 O4' A A 19 12.466 44.505 52.519 1.00 76.20 O
ATOM 9 C3' A A 19 11.059 45.412 50.803 1.00 77.43 C
ATOM 10 O3' A A 19 11.471 46.692 50.361 1.00 81.17 O
ATOM 11 C2' A A 19 11.972 44.338 50.231 1.00 76.89 C
ATOM 12 O2' A A 19 12.512 44.707 48.978 1.00 79.87 O
ATOM 13 C1' A A 19 13.082 44.244 51.278 1.00 74.32 C
ATOM 14 N9 A A 19 13.592 42.872 51.331 1.00 71.68 N
ATOM 15 C8 A A 19 13.013 41.795 51.973 1.00 71.60 C
ATOM 16 N7 A A 19 13.681 40.673 51.836 1.00 69.22 N
ATOM 17 C5 A A 19 14.771 41.032 51.055 1.00 68.49 C
ATOM 18 C6 A A 19 15.854 40.292 50.560 1.00 68.99 C
ATOM 19 N6 A A 19 16.021 38.984 50.792 1.00 67.73 N
ATOM 20 N1 A A 19 16.774 40.944 49.811 1.00 70.60 N
ATOM 21 C2 A A 19 16.599 42.258 49.586 1.00 71.34 C
ATOM 22 N3 A A 19 15.620 43.067 50.003 1.00 69.71 N
ATOM 23 C4 A A 19 14.730 42.384 50.740 1.00 69.64 C
ATOM 24 P A A 20 10.401 47.666 49.661 1.00 85.38 P
ATOM 25 OP1 A A 20 9.653 48.375 50.750 1.00 86.97 O
ATOM 26 OP2 A A 20 9.656 46.809 48.692 1.00 85.64 O
ATOM 27 O5' A A 20 11.299 48.729 48.862 1.00 84.42 O
TER

ATOM 1 O3' C B 94 21.666 43.261 51.502 1.00 72.24 O
ATOM 2 P A B 95 21.997 42.672 50.030 1.00 74.87 P
ATOM 3 OP1 A B 95 23.463 42.814 49.835 1.00 76.37 O
ATOM 4 OP2 A B 95 21.057 43.284 49.031 1.00 72.56 O
ATOM 5 O5' A B 95 21.714 41.105 50.134 1.00 72.28 O
ATOM 6 C5' A B 95 22.650 40.230 50.763 1.00 71.53 C
ATOM 7 C4' A B 95 21.915 39.161 51.539 1.00 72.86 C
ATOM 8 O4' A B 95 21.018 39.867 52.440 1.00 69.87 O
ATOM 9 C3' A B 95 21.029 38.228 50.708 1.00 74.89 C
ATOM 10 O3' A B 95 21.015 36.925 51.307 1.00 80.75 O
ATOM 11 C2' A B 95 19.656 38.894 50.816 1.00 70.73 C
ATOM 12 O2' A B 95 18.587 37.981 50.627 1.00 71.17 O
ATOM 13 C1' A B 95 19.697 39.422 52.254 1.00 65.16 C
ATOM 14 N9 A B 95 18.835 40.557 52.585 1.00 57.02 N
ATOM 15 C8 A B 95 19.024 41.889 52.304 1.00 52.07 C
ATOM 16 N7 A B 95 18.084 42.667 52.774 1.00 48.50 N
ATOM 17 C5 A B 95 17.212 41.789 53.407 1.00 52.96 C
ATOM 18 C6 A B 95 16.001 41.981 54.114 1.00 56.15 C
ATOM 19 N6 A B 95 15.438 43.175 54.324 1.00 57.18 N
ATOM 20 N1 A B 95 15.381 40.884 54.609 1.00 55.09 N
ATOM 21 C2 A B 95 15.943 39.688 54.411 1.00 53.87 C
ATOM 22 N3 A B 95 17.073 39.382 53.774 1.00 54.07 N
ATOM 23 C4 A B 95 17.662 40.489 53.289 1.00 54.76 C
ATOM 24 P U B 96 22.150 35.839 50.896 1.00 86.67 P
ATOM 25 OP1 U B 96 22.693 36.240 49.563 1.00 88.80 O
ATOM 26 OP2 U B 96 21.593 34.461 51.084 1.00 85.99 O
ATOM 27 O5' U B 96 23.323 36.027 51.971 1.00 86.91 O
TER

Atoms:
OP1: (9.737,47.311,53.909)
OP2: (9.299,46.258,56.221)
C3': (11.059,45.412,50.803)
C1': (13.082,44.244,51.278)
C5': (10.177,44.613,53.076)
O4': (12.466,44.505,52.519)
C8: (13.013,41.795,51.973)
O2': (12.512,44.707,48.978)
C6: (15.854,40.292,50.560)
C5: (14.771,41.032,51.055)
C4: (14.730,42.384,50.740)
P: (10.135,46.368,55.000)
C4': (11.270,45.299,52.310)
C2': (11.972,44.338,50.231)
C2: (16.599,42.258,49.586)
N1: (16.774,40.944,49.811)
N3: (15.620,43.067,50.003)
N6: (16.021,38.984,50.792)
N7: (13.681,40.673,51.836)
N9: (13.592,42.872,51.331)
O5': (10.342,44.884,54.453)
O3': (11.471,46.692,50.361)
OP1: (23.463,42.814,49.835)
OP2: (21.057,43.284,49.031)
C3': (21.029,38.228,50.708)
C1': (19.697,39.422,52.254)
C5': (22.650,40.230,50.763)
O4': (21.018,39.867,52.440)
C8: (19.024,41.889,52.304)
O2': (18.587,37.981,50.627)
C6: (16.001,41.981,54.114)
C5: (17.212,41.789,53.407)
C4: (17.662,40.489,53.289)
P: (21.997,42.672,50.030)
C4': (21.915,39.161,51.539)
C2': (19.656,38.894,50.816)
C2: (15.943,39.688,54.411)
N1: (15.381,40.884,54.609)
N3: (17.073,39.382,53.774)
N6: (15.438,43.175,54.324)
N7: (18.084,42.667,52.774)
N9: (18.835,40.557,52.585)
O5': (21.714,41.105,50.134)
O3': (21.015,36.925,51.307)
Image (generated by PyMOL):
PyMOL image
show in jmol