Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0746:0748
Extra
PDB:
ATOM 1 O3' A A 745 59.560 103.315 57.416 1.00 35.17 O
ATOM 2 P C A 746 59.795 104.342 58.641 1.00 34.86 P
ATOM 3 OP1 C A 746 61.128 103.958 59.212 1.00 35.81 O
ATOM 4 OP2 C A 746 58.602 104.383 59.523 1.00 33.62 O
ATOM 5 O5' C A 746 59.960 105.753 57.930 1.00 31.14 O
ATOM 6 C5' C A 746 58.928 106.748 57.984 1.00 33.41 C
ATOM 7 C4' C A 746 58.369 107.001 56.602 1.00 32.72 C
ATOM 8 O4' C A 746 57.534 105.878 56.203 1.00 33.56 O
ATOM 9 C3' C A 746 57.457 108.212 56.506 1.00 33.61 C
ATOM 10 O3' C A 746 58.258 109.379 56.301 1.00 34.50 O
ATOM 11 C2' C A 746 56.580 107.861 55.311 1.00 32.97 C
ATOM 12 O2' C A 746 57.245 108.084 54.089 1.00 34.46 O
ATOM 13 C1' C A 746 56.394 106.349 55.500 1.00 32.76 C
ATOM 14 N1 C A 746 55.183 106.002 56.278 1.00 32.43 N
ATOM 15 C2 C A 746 53.918 106.186 55.695 1.00 32.63 C
ATOM 16 O2 C A 746 53.844 106.550 54.517 1.00 34.49 O
ATOM 17 N3 C A 746 52.811 105.955 56.433 1.00 32.40 N
ATOM 18 C4 C A 746 52.926 105.537 57.694 1.00 31.14 C
ATOM 19 N4 C A 746 51.807 105.361 58.396 1.00 28.79 N
ATOM 20 C5 C A 746 54.193 105.293 58.294 1.00 30.08 C
ATOM 21 C6 C A 746 55.283 105.536 57.559 1.00 30.85 C
ATOM 22 P G A 747 57.602 110.850 56.372 1.00 35.65 P
ATOM 23 OP1 G A 747 56.412 110.912 55.489 1.00 34.14 O
ATOM 24 OP2 G A 747 58.712 111.810 56.179 1.00 37.39 O
ATOM 25 O5' G A 747 57.092 110.995 57.867 1.00 34.26 O
TER
ATOM 1 O3' G B 747 55.845 110.953 61.986 1.00 28.61 O
ATOM 2 P A B 748 55.586 109.643 62.873 1.00 28.48 P
ATOM 3 OP1 A B 748 55.704 110.102 64.290 1.00 27.00 O
ATOM 4 OP2 A B 748 56.474 108.561 62.359 1.00 24.14 O
ATOM 5 O5' A B 748 54.079 109.230 62.546 1.00 26.66 O
ATOM 6 C5' A B 748 52.959 109.870 63.197 1.00 27.88 C
ATOM 7 C4' A B 748 51.671 109.188 62.795 1.00 30.03 C
ATOM 8 O4' A B 748 51.403 109.430 61.386 1.00 30.51 O
ATOM 9 C3' A B 748 51.683 107.674 62.953 1.00 29.61 C
ATOM 10 O3' A B 748 50.352 107.215 63.158 1.00 28.79 O
ATOM 11 C2' A B 748 52.190 107.213 61.589 1.00 29.52 C
ATOM 12 O2' A B 748 51.760 105.906 61.279 1.00 31.73 O
ATOM 13 C1' A B 748 51.525 108.226 60.655 1.00 29.14 C
ATOM 14 N9 A B 748 52.270 108.544 59.436 1.00 29.82 N
ATOM 15 C8 A B 748 53.620 108.434 59.197 1.00 30.18 C
ATOM 16 N7 A B 748 53.989 108.900 58.028 1.00 28.28 N
ATOM 17 C5 A B 748 52.803 109.333 57.452 1.00 28.53 C
ATOM 18 C6 A B 748 52.520 109.962 56.233 1.00 28.36 C
ATOM 19 N6 A B 748 53.452 110.324 55.359 1.00 29.17 N
ATOM 20 N1 A B 748 51.231 110.234 55.950 1.00 27.86 N
ATOM 21 C2 A B 748 50.300 109.922 56.852 1.00 27.08 C
ATOM 22 N3 A B 748 50.440 109.362 58.044 1.00 28.35 N
ATOM 23 C4 A B 748 51.733 109.087 58.291 1.00 29.41 C
ATOM 24 P C B 749 49.758 107.089 64.644 1.00 26.32 P
ATOM 25 OP1 C B 749 50.849 107.044 65.635 1.00 31.20 O
ATOM 26 OP2 C B 749 48.771 105.990 64.590 1.00 30.17 O
ATOM 27 O5' C B 749 48.958 108.444 64.864 1.00 25.09 O
TER
ATOM 2 P C A 746 59.795 104.342 58.641 1.00 34.86 P
ATOM 3 OP1 C A 746 61.128 103.958 59.212 1.00 35.81 O
ATOM 4 OP2 C A 746 58.602 104.383 59.523 1.00 33.62 O
ATOM 5 O5' C A 746 59.960 105.753 57.930 1.00 31.14 O
ATOM 6 C5' C A 746 58.928 106.748 57.984 1.00 33.41 C
ATOM 7 C4' C A 746 58.369 107.001 56.602 1.00 32.72 C
ATOM 8 O4' C A 746 57.534 105.878 56.203 1.00 33.56 O
ATOM 9 C3' C A 746 57.457 108.212 56.506 1.00 33.61 C
ATOM 10 O3' C A 746 58.258 109.379 56.301 1.00 34.50 O
ATOM 11 C2' C A 746 56.580 107.861 55.311 1.00 32.97 C
ATOM 12 O2' C A 746 57.245 108.084 54.089 1.00 34.46 O
ATOM 13 C1' C A 746 56.394 106.349 55.500 1.00 32.76 C
ATOM 14 N1 C A 746 55.183 106.002 56.278 1.00 32.43 N
ATOM 15 C2 C A 746 53.918 106.186 55.695 1.00 32.63 C
ATOM 16 O2 C A 746 53.844 106.550 54.517 1.00 34.49 O
ATOM 17 N3 C A 746 52.811 105.955 56.433 1.00 32.40 N
ATOM 18 C4 C A 746 52.926 105.537 57.694 1.00 31.14 C
ATOM 19 N4 C A 746 51.807 105.361 58.396 1.00 28.79 N
ATOM 20 C5 C A 746 54.193 105.293 58.294 1.00 30.08 C
ATOM 21 C6 C A 746 55.283 105.536 57.559 1.00 30.85 C
ATOM 22 P G A 747 57.602 110.850 56.372 1.00 35.65 P
ATOM 23 OP1 G A 747 56.412 110.912 55.489 1.00 34.14 O
ATOM 24 OP2 G A 747 58.712 111.810 56.179 1.00 37.39 O
ATOM 25 O5' G A 747 57.092 110.995 57.867 1.00 34.26 O
TER
ATOM 1 O3' G B 747 55.845 110.953 61.986 1.00 28.61 O
ATOM 2 P A B 748 55.586 109.643 62.873 1.00 28.48 P
ATOM 3 OP1 A B 748 55.704 110.102 64.290 1.00 27.00 O
ATOM 4 OP2 A B 748 56.474 108.561 62.359 1.00 24.14 O
ATOM 5 O5' A B 748 54.079 109.230 62.546 1.00 26.66 O
ATOM 6 C5' A B 748 52.959 109.870 63.197 1.00 27.88 C
ATOM 7 C4' A B 748 51.671 109.188 62.795 1.00 30.03 C
ATOM 8 O4' A B 748 51.403 109.430 61.386 1.00 30.51 O
ATOM 9 C3' A B 748 51.683 107.674 62.953 1.00 29.61 C
ATOM 10 O3' A B 748 50.352 107.215 63.158 1.00 28.79 O
ATOM 11 C2' A B 748 52.190 107.213 61.589 1.00 29.52 C
ATOM 12 O2' A B 748 51.760 105.906 61.279 1.00 31.73 O
ATOM 13 C1' A B 748 51.525 108.226 60.655 1.00 29.14 C
ATOM 14 N9 A B 748 52.270 108.544 59.436 1.00 29.82 N
ATOM 15 C8 A B 748 53.620 108.434 59.197 1.00 30.18 C
ATOM 16 N7 A B 748 53.989 108.900 58.028 1.00 28.28 N
ATOM 17 C5 A B 748 52.803 109.333 57.452 1.00 28.53 C
ATOM 18 C6 A B 748 52.520 109.962 56.233 1.00 28.36 C
ATOM 19 N6 A B 748 53.452 110.324 55.359 1.00 29.17 N
ATOM 20 N1 A B 748 51.231 110.234 55.950 1.00 27.86 N
ATOM 21 C2 A B 748 50.300 109.922 56.852 1.00 27.08 C
ATOM 22 N3 A B 748 50.440 109.362 58.044 1.00 28.35 N
ATOM 23 C4 A B 748 51.733 109.087 58.291 1.00 29.41 C
ATOM 24 P C B 749 49.758 107.089 64.644 1.00 26.32 P
ATOM 25 OP1 C B 749 50.849 107.044 65.635 1.00 31.20 O
ATOM 26 OP2 C B 749 48.771 105.990 64.590 1.00 30.17 O
ATOM 27 O5' C B 749 48.958 108.444 64.864 1.00 25.09 O
TER
Atoms:
C2: (53.918,106.186,55.695)
OP1: (61.128,103.958,59.212)
OP2: (58.602,104.383,59.523)
C4: (52.926,105.537,57.694)
O5': (59.960,105.753,57.930)
C3': (57.457,108.212,56.506)
C1': (56.394,106.349,55.500)
O4': (57.534,105.878,56.203)
C5': (58.928,106.748,57.984)
P: (59.795,104.342,58.641)
O2: (53.844,106.550,54.517)
C4': (58.369,107.001,56.602)
C2': (56.580,107.861,55.311)
O2': (57.245,108.084,54.089)
N1: (55.183,106.002,56.278)
N3: (52.811,105.955,56.433)
N4: (51.807,105.361,58.396)
C6: (55.283,105.536,57.559)
C5: (54.193,105.293,58.294)
O3': (58.258,109.379,56.301)
OP1: (61.128,103.958,59.212)
OP2: (58.602,104.383,59.523)
C4: (52.926,105.537,57.694)
O5': (59.960,105.753,57.930)
C3': (57.457,108.212,56.506)
C1': (56.394,106.349,55.500)
O4': (57.534,105.878,56.203)
C5': (58.928,106.748,57.984)
P: (59.795,104.342,58.641)
O2: (53.844,106.550,54.517)
C4': (58.369,107.001,56.602)
C2': (56.580,107.861,55.311)
O2': (57.245,108.084,54.089)
N1: (55.183,106.002,56.278)
N3: (52.811,105.955,56.433)
N4: (51.807,105.361,58.396)
C6: (55.283,105.536,57.559)
C5: (54.193,105.293,58.294)
O3': (58.258,109.379,56.301)
OP1: (55.704,110.102,64.290)
OP2: (56.474,108.561,62.359)
C3': (51.683,107.674,62.953)
C1': (51.525,108.226,60.655)
C5': (52.959,109.870,63.197)
O4': (51.403,109.430,61.386)
C8: (53.620,108.434,59.197)
O2': (51.760,105.906,61.279)
C6: (52.520,109.962,56.233)
C5: (52.803,109.333,57.452)
C4: (51.733,109.087,58.291)
P: (55.586,109.643,62.873)
C4': (51.671,109.188,62.795)
C2': (52.190,107.213,61.589)
C2: (50.300,109.922,56.852)
N1: (51.231,110.234,55.950)
N3: (50.440,109.362,58.044)
N6: (53.452,110.324,55.359)
N7: (53.989,108.900,58.028)
N9: (52.270,108.544,59.436)
O5': (54.079,109.230,62.546)
O3': (50.352,107.215,63.158)
OP2: (56.474,108.561,62.359)
C3': (51.683,107.674,62.953)
C1': (51.525,108.226,60.655)
C5': (52.959,109.870,63.197)
O4': (51.403,109.430,61.386)
C8: (53.620,108.434,59.197)
O2': (51.760,105.906,61.279)
C6: (52.520,109.962,56.233)
C5: (52.803,109.333,57.452)
C4: (51.733,109.087,58.291)
P: (55.586,109.643,62.873)
C4': (51.671,109.188,62.795)
C2': (52.190,107.213,61.589)
C2: (50.300,109.922,56.852)
N1: (51.231,110.234,55.950)
N3: (50.440,109.362,58.044)
N6: (53.452,110.324,55.359)
N7: (53.989,108.900,58.028)
N9: (52.270,108.544,59.436)
O5': (54.079,109.230,62.546)
O3': (50.352,107.215,63.158)
Image (generated by PyMOL):