Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0574:0575
Extra
PDB:
ATOM 1 O3' C A 573 -10.870 84.507 116.456 1.00 63.28 O
ATOM 2 P C A 574 -10.839 85.310 115.065 1.00 63.56 P
ATOM 3 OP1 C A 574 -11.801 84.661 114.137 1.00 63.23 O
ATOM 4 OP2 C A 574 -9.421 85.460 114.660 1.00 65.36 O
ATOM 5 O5' C A 574 -11.418 86.743 115.435 1.00 62.51 O
ATOM 6 C5' C A 574 -12.786 86.895 115.830 1.00 63.67 C
ATOM 7 C4' C A 574 -13.014 88.276 116.372 1.00 65.05 C
ATOM 8 O4' C A 574 -12.136 88.492 117.503 1.00 65.31 O
ATOM 9 C3' C A 574 -12.675 89.399 115.413 1.00 66.23 C
ATOM 10 O3' C A 574 -13.771 89.649 114.541 1.00 68.33 O
ATOM 11 C2' C A 574 -12.393 90.566 116.352 1.00 66.42 C
ATOM 12 O2' C A 574 -13.572 91.219 116.793 1.00 64.80 O
ATOM 13 C1' C A 574 -11.718 89.850 117.529 1.00 66.03 C
ATOM 14 N1 C A 574 -10.236 89.891 117.550 1.00 65.69 N
ATOM 15 C2 C A 574 -9.588 91.009 118.122 1.00 64.39 C
ATOM 16 O2 C A 574 -10.270 91.947 118.569 1.00 62.28 O
ATOM 17 N3 C A 574 -8.234 91.032 118.165 1.00 64.07 N
ATOM 18 C4 C A 574 -7.529 90.013 117.662 1.00 64.06 C
ATOM 19 N4 C A 574 -6.201 90.083 117.727 1.00 64.10 N
ATOM 20 C5 C A 574 -8.157 88.877 117.070 1.00 64.22 C
ATOM 21 C6 C A 574 -9.497 88.858 117.034 1.00 65.56 C
ATOM 22 P A A 575 -13.502 90.224 113.069 1.00 69.26 P
ATOM 23 OP1 A A 575 -13.035 91.632 113.210 1.00 69.03 O
ATOM 24 OP2 A A 575 -14.697 89.927 112.238 1.00 67.71 O
ATOM 25 O5' A A 575 -12.302 89.329 112.526 1.00 68.86 O
TER
ATOM 1 O3' C B 574 -13.771 89.649 114.541 1.00 68.33 O
ATOM 2 P A B 575 -13.502 90.224 113.069 1.00 69.26 P
ATOM 3 OP1 A B 575 -13.035 91.632 113.210 1.00 69.03 O
ATOM 4 OP2 A B 575 -14.697 89.927 112.238 1.00 67.71 O
ATOM 5 O5' A B 575 -12.302 89.329 112.526 1.00 68.86 O
ATOM 6 C5' A B 575 -12.111 89.165 111.118 1.00 69.53 C
ATOM 7 C4' A B 575 -10.659 88.913 110.799 1.00 68.85 C
ATOM 8 O4' A B 575 -9.852 90.027 111.268 1.00 69.09 O
ATOM 9 C3' A B 575 -10.029 87.658 111.381 1.00 68.32 C
ATOM 10 O3' A B 575 -9.132 87.153 110.413 1.00 68.72 O
ATOM 11 C2' A B 575 -9.257 88.186 112.586 1.00 68.20 C
ATOM 12 O2' A B 575 -8.134 87.384 112.896 1.00 68.35 O
ATOM 13 C1' A B 575 -8.797 89.543 112.070 1.00 67.99 C
ATOM 14 N9 A B 575 -8.513 90.534 113.109 1.00 67.59 N
ATOM 15 C8 A B 575 -9.400 91.270 113.860 1.00 67.03 C
ATOM 16 N7 A B 575 -8.822 92.111 114.686 1.00 66.65 N
ATOM 17 C5 A B 575 -7.464 91.909 114.472 1.00 66.38 C
ATOM 18 C6 A B 575 -6.316 92.498 115.035 1.00 65.80 C
ATOM 19 N6 A B 575 -6.350 93.458 115.964 1.00 65.67 N
ATOM 20 N1 A B 575 -5.113 92.064 114.602 1.00 64.94 N
ATOM 21 C2 A B 575 -5.074 91.108 113.667 1.00 64.57 C
ATOM 22 N3 A B 575 -6.076 90.481 113.061 1.00 65.15 N
ATOM 23 C4 A B 575 -7.260 90.933 113.512 1.00 66.65 C
ATOM 24 P G B 576 -9.436 85.741 109.720 1.00 70.70 P
ATOM 25 OP1 G B 576 -10.914 85.579 109.673 1.00 70.82 O
ATOM 26 OP2 G B 576 -8.600 84.719 110.405 1.00 70.22 O
ATOM 27 O5' G B 576 -8.910 85.923 108.228 1.00 69.18 O
TER
ATOM 2 P C A 574 -10.839 85.310 115.065 1.00 63.56 P
ATOM 3 OP1 C A 574 -11.801 84.661 114.137 1.00 63.23 O
ATOM 4 OP2 C A 574 -9.421 85.460 114.660 1.00 65.36 O
ATOM 5 O5' C A 574 -11.418 86.743 115.435 1.00 62.51 O
ATOM 6 C5' C A 574 -12.786 86.895 115.830 1.00 63.67 C
ATOM 7 C4' C A 574 -13.014 88.276 116.372 1.00 65.05 C
ATOM 8 O4' C A 574 -12.136 88.492 117.503 1.00 65.31 O
ATOM 9 C3' C A 574 -12.675 89.399 115.413 1.00 66.23 C
ATOM 10 O3' C A 574 -13.771 89.649 114.541 1.00 68.33 O
ATOM 11 C2' C A 574 -12.393 90.566 116.352 1.00 66.42 C
ATOM 12 O2' C A 574 -13.572 91.219 116.793 1.00 64.80 O
ATOM 13 C1' C A 574 -11.718 89.850 117.529 1.00 66.03 C
ATOM 14 N1 C A 574 -10.236 89.891 117.550 1.00 65.69 N
ATOM 15 C2 C A 574 -9.588 91.009 118.122 1.00 64.39 C
ATOM 16 O2 C A 574 -10.270 91.947 118.569 1.00 62.28 O
ATOM 17 N3 C A 574 -8.234 91.032 118.165 1.00 64.07 N
ATOM 18 C4 C A 574 -7.529 90.013 117.662 1.00 64.06 C
ATOM 19 N4 C A 574 -6.201 90.083 117.727 1.00 64.10 N
ATOM 20 C5 C A 574 -8.157 88.877 117.070 1.00 64.22 C
ATOM 21 C6 C A 574 -9.497 88.858 117.034 1.00 65.56 C
ATOM 22 P A A 575 -13.502 90.224 113.069 1.00 69.26 P
ATOM 23 OP1 A A 575 -13.035 91.632 113.210 1.00 69.03 O
ATOM 24 OP2 A A 575 -14.697 89.927 112.238 1.00 67.71 O
ATOM 25 O5' A A 575 -12.302 89.329 112.526 1.00 68.86 O
TER
ATOM 1 O3' C B 574 -13.771 89.649 114.541 1.00 68.33 O
ATOM 2 P A B 575 -13.502 90.224 113.069 1.00 69.26 P
ATOM 3 OP1 A B 575 -13.035 91.632 113.210 1.00 69.03 O
ATOM 4 OP2 A B 575 -14.697 89.927 112.238 1.00 67.71 O
ATOM 5 O5' A B 575 -12.302 89.329 112.526 1.00 68.86 O
ATOM 6 C5' A B 575 -12.111 89.165 111.118 1.00 69.53 C
ATOM 7 C4' A B 575 -10.659 88.913 110.799 1.00 68.85 C
ATOM 8 O4' A B 575 -9.852 90.027 111.268 1.00 69.09 O
ATOM 9 C3' A B 575 -10.029 87.658 111.381 1.00 68.32 C
ATOM 10 O3' A B 575 -9.132 87.153 110.413 1.00 68.72 O
ATOM 11 C2' A B 575 -9.257 88.186 112.586 1.00 68.20 C
ATOM 12 O2' A B 575 -8.134 87.384 112.896 1.00 68.35 O
ATOM 13 C1' A B 575 -8.797 89.543 112.070 1.00 67.99 C
ATOM 14 N9 A B 575 -8.513 90.534 113.109 1.00 67.59 N
ATOM 15 C8 A B 575 -9.400 91.270 113.860 1.00 67.03 C
ATOM 16 N7 A B 575 -8.822 92.111 114.686 1.00 66.65 N
ATOM 17 C5 A B 575 -7.464 91.909 114.472 1.00 66.38 C
ATOM 18 C6 A B 575 -6.316 92.498 115.035 1.00 65.80 C
ATOM 19 N6 A B 575 -6.350 93.458 115.964 1.00 65.67 N
ATOM 20 N1 A B 575 -5.113 92.064 114.602 1.00 64.94 N
ATOM 21 C2 A B 575 -5.074 91.108 113.667 1.00 64.57 C
ATOM 22 N3 A B 575 -6.076 90.481 113.061 1.00 65.15 N
ATOM 23 C4 A B 575 -7.260 90.933 113.512 1.00 66.65 C
ATOM 24 P G B 576 -9.436 85.741 109.720 1.00 70.70 P
ATOM 25 OP1 G B 576 -10.914 85.579 109.673 1.00 70.82 O
ATOM 26 OP2 G B 576 -8.600 84.719 110.405 1.00 70.22 O
ATOM 27 O5' G B 576 -8.910 85.923 108.228 1.00 69.18 O
TER
Atoms:
C2: (-9.588,91.009,118.122)
OP1: (-11.801,84.661,114.137)
OP2: (-9.421,85.460,114.660)
C4: (-7.529,90.013,117.662)
O5': (-11.418,86.743,115.435)
C3': (-12.675,89.399,115.413)
C1': (-11.718,89.850,117.529)
O4': (-12.136,88.492,117.503)
C5': (-12.786,86.895,115.830)
P: (-10.839,85.310,115.065)
O2: (-10.270,91.947,118.569)
C4': (-13.014,88.276,116.372)
C2': (-12.393,90.566,116.352)
O2': (-13.572,91.219,116.793)
N1: (-10.236,89.891,117.550)
N3: (-8.234,91.032,118.165)
N4: (-6.201,90.083,117.727)
C6: (-9.497,88.858,117.034)
C5: (-8.157,88.877,117.070)
O3': (-13.771,89.649,114.541)
OP1: (-11.801,84.661,114.137)
OP2: (-9.421,85.460,114.660)
C4: (-7.529,90.013,117.662)
O5': (-11.418,86.743,115.435)
C3': (-12.675,89.399,115.413)
C1': (-11.718,89.850,117.529)
O4': (-12.136,88.492,117.503)
C5': (-12.786,86.895,115.830)
P: (-10.839,85.310,115.065)
O2: (-10.270,91.947,118.569)
C4': (-13.014,88.276,116.372)
C2': (-12.393,90.566,116.352)
O2': (-13.572,91.219,116.793)
N1: (-10.236,89.891,117.550)
N3: (-8.234,91.032,118.165)
N4: (-6.201,90.083,117.727)
C6: (-9.497,88.858,117.034)
C5: (-8.157,88.877,117.070)
O3': (-13.771,89.649,114.541)
OP1: (-13.035,91.632,113.210)
OP2: (-14.697,89.927,112.238)
C3': (-10.029,87.658,111.381)
C1': (-8.797,89.543,112.070)
C5': (-12.111,89.165,111.118)
O4': (-9.852,90.027,111.268)
C8: (-9.400,91.270,113.860)
O2': (-8.134,87.384,112.896)
C6: (-6.316,92.498,115.035)
C5: (-7.464,91.909,114.472)
C4: (-7.260,90.933,113.512)
P: (-13.502,90.224,113.069)
C4': (-10.659,88.913,110.799)
C2': (-9.257,88.186,112.586)
C2: (-5.074,91.108,113.667)
N1: (-5.113,92.064,114.602)
N3: (-6.076,90.481,113.061)
N6: (-6.350,93.458,115.964)
N7: (-8.822,92.111,114.686)
N9: (-8.513,90.534,113.109)
O5': (-12.302,89.329,112.526)
O3': (-9.132,87.153,110.413)
OP2: (-14.697,89.927,112.238)
C3': (-10.029,87.658,111.381)
C1': (-8.797,89.543,112.070)
C5': (-12.111,89.165,111.118)
O4': (-9.852,90.027,111.268)
C8: (-9.400,91.270,113.860)
O2': (-8.134,87.384,112.896)
C6: (-6.316,92.498,115.035)
C5: (-7.464,91.909,114.472)
C4: (-7.260,90.933,113.512)
P: (-13.502,90.224,113.069)
C4': (-10.659,88.913,110.799)
C2': (-9.257,88.186,112.586)
C2: (-5.074,91.108,113.667)
N1: (-5.113,92.064,114.602)
N3: (-6.076,90.481,113.061)
N6: (-6.350,93.458,115.964)
N7: (-8.822,92.111,114.686)
N9: (-8.513,90.534,113.109)
O5': (-12.302,89.329,112.526)
O3': (-9.132,87.153,110.413)
Image (generated by PyMOL):