Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2234:A2235
Extra
PDB:
ATOM 1 O3' C A2233 53.024 72.150 82.606 1.00 44.11 O
ATOM 2 P C A2234 52.448 72.906 81.323 1.00 44.14 P
ATOM 3 OP1 C A2234 52.220 71.912 80.245 1.00 43.82 O
ATOM 4 OP2 C A2234 53.337 74.066 81.073 1.00 45.29 O
ATOM 5 O5' C A2234 51.026 73.393 81.837 1.00 42.44 O
ATOM 6 C5' C A2234 50.115 72.425 82.395 1.00 42.11 C
ATOM 7 C4' C A2234 49.083 73.093 83.258 1.00 40.31 C
ATOM 8 O4' C A2234 49.714 73.747 84.375 1.00 40.37 O
ATOM 9 C3' C A2234 48.356 74.205 82.554 1.00 39.66 C
ATOM 10 O3' C A2234 47.279 73.690 81.824 1.00 39.71 O
ATOM 11 C2' C A2234 47.861 75.057 83.699 1.00 39.54 C
ATOM 12 O2' C A2234 46.707 74.522 84.301 1.00 42.43 O
ATOM 13 C1' C A2234 49.031 74.950 84.663 1.00 39.36 C
ATOM 14 N1 C A2234 49.963 76.067 84.498 1.00 38.77 N
ATOM 15 C2 C A2234 49.760 77.211 85.247 1.00 39.52 C
ATOM 16 O2 C A2234 48.774 77.264 85.996 1.00 42.53 O
ATOM 17 N3 C A2234 50.629 78.233 85.135 1.00 37.78 N
ATOM 18 C4 C A2234 51.667 78.140 84.302 1.00 36.14 C
ATOM 19 N4 C A2234 52.507 79.163 84.246 1.00 34.53 N
ATOM 20 C5 C A2234 51.885 76.993 83.500 1.00 36.60 C
ATOM 21 C6 C A2234 51.015 75.988 83.629 1.00 38.21 C
ATOM 22 P A A2235 46.740 74.491 80.558 1.00 39.76 P
ATOM 23 OP1 A A2235 46.409 75.867 80.982 1.00 39.53 O
ATOM 24 OP2 A A2235 45.707 73.650 79.952 1.00 41.25 O
ATOM 25 O5' A A2235 48.009 74.557 79.613 1.00 38.83 O
TER
ATOM 1 O3' C B2234 47.279 73.690 81.824 1.00 39.71 O
ATOM 2 P A B2235 46.740 74.491 80.558 1.00 39.76 P
ATOM 3 OP1 A B2235 46.409 75.867 80.982 1.00 39.53 O
ATOM 4 OP2 A B2235 45.707 73.650 79.952 1.00 41.25 O
ATOM 5 O5' A B2235 48.009 74.557 79.613 1.00 38.83 O
ATOM 6 C5' A B2235 47.890 74.988 78.260 1.00 39.03 C
ATOM 7 C4' A B2235 49.014 75.932 77.910 1.00 40.11 C
ATOM 8 O4' A B2235 48.855 77.192 78.612 1.00 38.27 O
ATOM 9 C3' A B2235 50.415 75.440 78.253 1.00 40.55 C
ATOM 10 O3' A B2235 51.310 75.997 77.302 1.00 42.61 O
ATOM 11 C2' A B2235 50.672 76.106 79.593 1.00 39.21 C
ATOM 12 O2' A B2235 52.052 76.210 79.845 1.00 39.95 O
ATOM 13 C1' A B2235 50.022 77.463 79.342 1.00 37.74 C
ATOM 14 N9 A B2235 49.635 78.235 80.504 1.00 36.74 N
ATOM 15 C8 A B2235 48.668 77.996 81.448 1.00 37.24 C
ATOM 16 N7 A B2235 48.629 78.897 82.396 1.00 35.52 N
ATOM 17 C5 A B2235 49.629 79.794 82.034 1.00 36.59 C
ATOM 18 C6 A B2235 50.116 80.960 82.628 1.00 36.38 C
ATOM 19 N6 A B2235 49.682 81.436 83.795 1.00 35.35 N
ATOM 20 N1 A B2235 51.102 81.625 81.987 1.00 36.06 N
ATOM 21 C2 A B2235 51.585 81.127 80.846 1.00 35.88 C
ATOM 22 N3 A B2235 51.232 80.030 80.205 1.00 36.64 N
ATOM 23 C4 A B2235 50.236 79.405 80.860 1.00 36.86 C
ATOM 24 P A B2236 51.966 75.056 76.203 1.00 44.30 P
ATOM 25 OP1 A B2236 50.838 74.269 75.683 1.00 44.32 O
ATOM 26 OP2 A B2236 53.139 74.369 76.832 1.00 43.84 O
ATOM 27 O5' A B2236 52.415 76.054 75.053 1.00 44.57 O
TER
ATOM 2 P C A2234 52.448 72.906 81.323 1.00 44.14 P
ATOM 3 OP1 C A2234 52.220 71.912 80.245 1.00 43.82 O
ATOM 4 OP2 C A2234 53.337 74.066 81.073 1.00 45.29 O
ATOM 5 O5' C A2234 51.026 73.393 81.837 1.00 42.44 O
ATOM 6 C5' C A2234 50.115 72.425 82.395 1.00 42.11 C
ATOM 7 C4' C A2234 49.083 73.093 83.258 1.00 40.31 C
ATOM 8 O4' C A2234 49.714 73.747 84.375 1.00 40.37 O
ATOM 9 C3' C A2234 48.356 74.205 82.554 1.00 39.66 C
ATOM 10 O3' C A2234 47.279 73.690 81.824 1.00 39.71 O
ATOM 11 C2' C A2234 47.861 75.057 83.699 1.00 39.54 C
ATOM 12 O2' C A2234 46.707 74.522 84.301 1.00 42.43 O
ATOM 13 C1' C A2234 49.031 74.950 84.663 1.00 39.36 C
ATOM 14 N1 C A2234 49.963 76.067 84.498 1.00 38.77 N
ATOM 15 C2 C A2234 49.760 77.211 85.247 1.00 39.52 C
ATOM 16 O2 C A2234 48.774 77.264 85.996 1.00 42.53 O
ATOM 17 N3 C A2234 50.629 78.233 85.135 1.00 37.78 N
ATOM 18 C4 C A2234 51.667 78.140 84.302 1.00 36.14 C
ATOM 19 N4 C A2234 52.507 79.163 84.246 1.00 34.53 N
ATOM 20 C5 C A2234 51.885 76.993 83.500 1.00 36.60 C
ATOM 21 C6 C A2234 51.015 75.988 83.629 1.00 38.21 C
ATOM 22 P A A2235 46.740 74.491 80.558 1.00 39.76 P
ATOM 23 OP1 A A2235 46.409 75.867 80.982 1.00 39.53 O
ATOM 24 OP2 A A2235 45.707 73.650 79.952 1.00 41.25 O
ATOM 25 O5' A A2235 48.009 74.557 79.613 1.00 38.83 O
TER
ATOM 1 O3' C B2234 47.279 73.690 81.824 1.00 39.71 O
ATOM 2 P A B2235 46.740 74.491 80.558 1.00 39.76 P
ATOM 3 OP1 A B2235 46.409 75.867 80.982 1.00 39.53 O
ATOM 4 OP2 A B2235 45.707 73.650 79.952 1.00 41.25 O
ATOM 5 O5' A B2235 48.009 74.557 79.613 1.00 38.83 O
ATOM 6 C5' A B2235 47.890 74.988 78.260 1.00 39.03 C
ATOM 7 C4' A B2235 49.014 75.932 77.910 1.00 40.11 C
ATOM 8 O4' A B2235 48.855 77.192 78.612 1.00 38.27 O
ATOM 9 C3' A B2235 50.415 75.440 78.253 1.00 40.55 C
ATOM 10 O3' A B2235 51.310 75.997 77.302 1.00 42.61 O
ATOM 11 C2' A B2235 50.672 76.106 79.593 1.00 39.21 C
ATOM 12 O2' A B2235 52.052 76.210 79.845 1.00 39.95 O
ATOM 13 C1' A B2235 50.022 77.463 79.342 1.00 37.74 C
ATOM 14 N9 A B2235 49.635 78.235 80.504 1.00 36.74 N
ATOM 15 C8 A B2235 48.668 77.996 81.448 1.00 37.24 C
ATOM 16 N7 A B2235 48.629 78.897 82.396 1.00 35.52 N
ATOM 17 C5 A B2235 49.629 79.794 82.034 1.00 36.59 C
ATOM 18 C6 A B2235 50.116 80.960 82.628 1.00 36.38 C
ATOM 19 N6 A B2235 49.682 81.436 83.795 1.00 35.35 N
ATOM 20 N1 A B2235 51.102 81.625 81.987 1.00 36.06 N
ATOM 21 C2 A B2235 51.585 81.127 80.846 1.00 35.88 C
ATOM 22 N3 A B2235 51.232 80.030 80.205 1.00 36.64 N
ATOM 23 C4 A B2235 50.236 79.405 80.860 1.00 36.86 C
ATOM 24 P A B2236 51.966 75.056 76.203 1.00 44.30 P
ATOM 25 OP1 A B2236 50.838 74.269 75.683 1.00 44.32 O
ATOM 26 OP2 A B2236 53.139 74.369 76.832 1.00 43.84 O
ATOM 27 O5' A B2236 52.415 76.054 75.053 1.00 44.57 O
TER
Atoms:
C2: (49.760,77.211,85.247)
OP1: (52.220,71.912,80.245)
OP2: (53.337,74.066,81.073)
C4: (51.667,78.140,84.302)
O5': (51.026,73.393,81.837)
C3': (48.356,74.205,82.554)
C1': (49.031,74.950,84.663)
O4': (49.714,73.747,84.375)
C5': (50.115,72.425,82.395)
P: (52.448,72.906,81.323)
O2: (48.774,77.264,85.996)
C4': (49.083,73.093,83.258)
C2': (47.861,75.057,83.699)
O2': (46.707,74.522,84.301)
N1: (49.963,76.067,84.498)
N3: (50.629,78.233,85.135)
N4: (52.507,79.163,84.246)
C6: (51.015,75.988,83.629)
C5: (51.885,76.993,83.500)
O3': (47.279,73.690,81.824)
OP1: (52.220,71.912,80.245)
OP2: (53.337,74.066,81.073)
C4: (51.667,78.140,84.302)
O5': (51.026,73.393,81.837)
C3': (48.356,74.205,82.554)
C1': (49.031,74.950,84.663)
O4': (49.714,73.747,84.375)
C5': (50.115,72.425,82.395)
P: (52.448,72.906,81.323)
O2: (48.774,77.264,85.996)
C4': (49.083,73.093,83.258)
C2': (47.861,75.057,83.699)
O2': (46.707,74.522,84.301)
N1: (49.963,76.067,84.498)
N3: (50.629,78.233,85.135)
N4: (52.507,79.163,84.246)
C6: (51.015,75.988,83.629)
C5: (51.885,76.993,83.500)
O3': (47.279,73.690,81.824)
OP1: (46.409,75.867,80.982)
OP2: (45.707,73.650,79.952)
C3': (50.415,75.440,78.253)
C1': (50.022,77.463,79.342)
C5': (47.890,74.988,78.260)
O4': (48.855,77.192,78.612)
C8: (48.668,77.996,81.448)
O2': (52.052,76.210,79.845)
C6: (50.116,80.960,82.628)
C5: (49.629,79.794,82.034)
C4: (50.236,79.405,80.860)
P: (46.740,74.491,80.558)
C4': (49.014,75.932,77.910)
C2': (50.672,76.106,79.593)
C2: (51.585,81.127,80.846)
N1: (51.102,81.625,81.987)
N3: (51.232,80.030,80.205)
N6: (49.682,81.436,83.795)
N7: (48.629,78.897,82.396)
N9: (49.635,78.235,80.504)
O5': (48.009,74.557,79.613)
O3': (51.310,75.997,77.302)
OP2: (45.707,73.650,79.952)
C3': (50.415,75.440,78.253)
C1': (50.022,77.463,79.342)
C5': (47.890,74.988,78.260)
O4': (48.855,77.192,78.612)
C8: (48.668,77.996,81.448)
O2': (52.052,76.210,79.845)
C6: (50.116,80.960,82.628)
C5: (49.629,79.794,82.034)
C4: (50.236,79.405,80.860)
P: (46.740,74.491,80.558)
C4': (49.014,75.932,77.910)
C2': (50.672,76.106,79.593)
C2: (51.585,81.127,80.846)
N1: (51.102,81.625,81.987)
N3: (51.232,80.030,80.205)
N6: (49.682,81.436,83.795)
N7: (48.629,78.897,82.396)
N9: (49.635,78.235,80.504)
O5': (48.009,74.557,79.613)
O3': (51.310,75.997,77.302)
Image (generated by PyMOL):