ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A2091:A2094

Extra

PDB:
ATOM 1 O3' U A2090 -44.951 -7.204 52.346 1.00 16.27 O
ATOM 2 P C A2091 -43.433 -7.616 52.595 1.00 24.83 P
ATOM 3 OP1 C A2091 -42.695 -7.467 51.319 1.00 36.21 O
ATOM 4 OP2 C A2091 -43.446 -8.938 53.300 1.00 36.21 O
ATOM 5 O5' C A2091 -42.924 -6.490 53.592 1.00 89.48 O
ATOM 6 C5' C A2091 -43.023 -5.105 53.222 1.00 89.48 C
ATOM 7 C4' C A2091 -42.438 -4.231 54.299 1.00 89.48 C
ATOM 8 O4' C A2091 -43.312 -4.219 55.454 1.00 89.48 O
ATOM 9 C3' C A2091 -41.100 -4.694 54.837 1.00 89.48 C
ATOM 10 O3' C A2091 -40.039 -4.293 53.990 1.00 89.48 O
ATOM 11 C2' C A2091 -41.069 -4.089 56.235 1.00 89.48 C
ATOM 12 O2' C A2091 -40.703 -2.721 56.259 1.00 89.48 O
ATOM 13 C1' C A2091 -42.537 -4.202 56.639 1.00 89.48 C
ATOM 14 N1 C A2091 -42.840 -5.432 57.383 1.00 67.82 N
ATOM 15 C2 C A2091 -42.923 -5.379 58.772 1.00 67.68 C
ATOM 16 O2 C A2091 -42.692 -4.306 59.348 1.00 67.68 O
ATOM 17 N3 C A2091 -43.249 -6.495 59.455 1.00 67.65 N
ATOM 18 C4 C A2091 -43.477 -7.632 58.800 1.00 67.76 C
ATOM 19 N4 C A2091 -43.811 -8.711 59.513 1.00 67.85 N
ATOM 20 C5 C A2091 -43.375 -7.719 57.386 1.00 67.69 C
ATOM 21 C6 C A2091 -43.055 -6.607 56.724 1.00 67.72 C
ATOM 22 P G A2092 -38.867 -5.338 53.658 1.00 53.54 P
ATOM 23 OP1 G A2092 -38.310 -4.980 52.328 1.00 81.38 O
ATOM 24 OP2 G A2092 -39.375 -6.721 53.903 1.00 81.26 O
ATOM 25 O5' G A2092 -37.769 -5.011 54.758 1.00101.18 O
TER

ATOM 1 O3' G B2093 -35.962 -7.661 61.690 1.00128.48 O
ATOM 2 P A B2094 -35.167 -6.631 62.648 1.00199.59 P
ATOM 3 OP1 A B2094 -34.924 -5.401 61.851 1.00199.48 O
ATOM 4 OP2 A B2094 -34.017 -7.345 63.262 1.00199.58 O
ATOM 5 O5' A B2094 -36.205 -6.254 63.808 1.00116.37 O
ATOM 6 C5' A B2094 -36.704 -7.259 64.737 1.00116.37 C
ATOM 7 C4' A B2094 -38.110 -6.910 65.175 1.00116.37 C
ATOM 8 O4' A B2094 -38.854 -6.518 63.992 1.00116.37 O
ATOM 9 C3' A B2094 -38.943 -8.030 65.796 1.00116.37 C
ATOM 10 O3' A B2094 -38.817 -8.190 67.205 1.00116.37 O
ATOM 11 C2' A B2094 -40.365 -7.605 65.473 1.00116.37 C
ATOM 12 O2' A B2094 -40.852 -6.672 66.412 1.00116.37 O
ATOM 13 C1' A B2094 -40.194 -6.960 64.099 1.00116.37 C
ATOM 14 N9 A B2094 -40.464 -7.895 63.004 1.00 78.38 N
ATOM 15 C8 A B2094 -40.961 -9.178 63.089 1.00 78.46 C
ATOM 16 N7 A B2094 -41.111 -9.763 61.930 1.00 78.57 N
ATOM 17 C5 A B2094 -40.683 -8.809 61.019 1.00 78.62 C
ATOM 18 C6 A B2094 -40.601 -8.816 59.625 1.00 78.52 C
ATOM 19 N6 A B2094 -40.967 -9.857 58.873 1.00 78.44 N
ATOM 20 N1 A B2094 -40.128 -7.705 59.016 1.00 78.48 N
ATOM 21 C2 A B2094 -39.768 -6.665 59.776 1.00 78.49 C
ATOM 22 N3 A B2094 -39.801 -6.538 61.097 1.00 78.58 N
ATOM 23 C4 A B2094 -40.276 -7.657 61.666 1.00 78.58 C
ATOM 24 P U B2095 -39.727 -9.294 67.964 1.00123.62 P
ATOM 25 OP1 U B2095 -38.842 -9.997 68.924 1.00 99.50 O
ATOM 26 OP2 U B2095 -40.507 -10.091 66.973 1.00 99.42 O
ATOM 27 O5' U B2095 -40.777 -8.443 68.809 1.00107.52 O
TER

Atoms:
C2: (-42.923,-5.379,58.772)
OP1: (-42.695,-7.467,51.319)
OP2: (-43.446,-8.938,53.300)
C4: (-43.477,-7.632,58.800)
O5': (-42.924,-6.490,53.592)
C3': (-41.100,-4.694,54.837)
C1': (-42.537,-4.202,56.639)
O4': (-43.312,-4.219,55.454)
C5': (-43.023,-5.105,53.222)
P: (-43.433,-7.616,52.595)
O2: (-42.692,-4.306,59.348)
C4': (-42.438,-4.231,54.299)
C2': (-41.069,-4.089,56.235)
O2': (-40.703,-2.721,56.259)
N1: (-42.840,-5.432,57.383)
N3: (-43.249,-6.495,59.455)
N4: (-43.811,-8.711,59.513)
C6: (-43.055,-6.607,56.724)
C5: (-43.375,-7.719,57.386)
O3': (-40.039,-4.293,53.990)
OP1: (-34.924,-5.401,61.851)
OP2: (-34.017,-7.345,63.262)
C3': (-38.943,-8.030,65.796)
C1': (-40.194,-6.960,64.099)
C5': (-36.704,-7.259,64.737)
O4': (-38.854,-6.518,63.992)
C8: (-40.961,-9.178,63.089)
O2': (-40.852,-6.672,66.412)
C6: (-40.601,-8.816,59.625)
C5: (-40.683,-8.809,61.019)
C4: (-40.276,-7.657,61.666)
P: (-35.167,-6.631,62.648)
C4': (-38.110,-6.910,65.175)
C2': (-40.365,-7.605,65.473)
C2: (-39.768,-6.665,59.776)
N1: (-40.128,-7.705,59.016)
N3: (-39.801,-6.538,61.097)
N6: (-40.967,-9.857,58.873)
N7: (-41.111,-9.763,61.930)
N9: (-40.464,-7.895,63.004)
O5': (-36.205,-6.254,63.808)
O3': (-38.817,-8.190,67.205)
Image (generated by PyMOL):
PyMOL image
show in jmol