Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02393:02418
Extra
PDB:
ATOM 1 O3' C A2392 54.594 119.083 130.345 1.00 36.06 O
ATOM 2 P C A2393 54.431 119.017 131.938 1.00 36.24 P
ATOM 3 OP1 C A2393 53.359 118.042 132.257 1.00 36.81 O
ATOM 4 OP2 C A2393 54.341 120.390 132.454 1.00 38.23 O
ATOM 5 O5' C A2393 55.821 118.433 132.430 1.00 35.82 O
ATOM 6 C5' C A2393 56.285 117.177 131.949 1.00 38.15 C
ATOM 7 C4' C A2393 57.574 116.825 132.623 1.00 40.82 C
ATOM 8 O4' C A2393 58.608 117.738 132.169 1.00 42.07 O
ATOM 9 C3' C A2393 57.543 116.937 134.140 1.00 42.36 C
ATOM 10 O3' C A2393 58.377 115.941 134.679 1.00 42.93 O
ATOM 11 C2' C A2393 58.152 118.313 134.388 1.00 43.26 C
ATOM 12 O2' C A2393 58.790 118.436 135.644 1.00 45.03 O
ATOM 13 C1' C A2393 59.192 118.378 133.277 1.00 41.89 C
ATOM 14 N1 C A2393 59.594 119.737 132.889 1.00 42.04 N
ATOM 15 C2 C A2393 60.934 119.968 132.580 1.00 43.36 C
ATOM 16 O2 C A2393 61.724 119.005 132.567 1.00 44.49 O
ATOM 17 N3 C A2393 61.342 121.227 132.302 1.00 43.34 N
ATOM 18 C4 C A2393 60.464 122.232 132.324 1.00 44.56 C
ATOM 19 N4 C A2393 60.923 123.468 132.110 1.00 43.25 N
ATOM 20 C5 C A2393 59.077 122.016 132.584 1.00 43.93 C
ATOM 21 C6 C A2393 58.690 120.764 132.855 1.00 43.33 C
ATOM 22 P A A2394 57.766 114.871 135.691 1.00 45.20 P
ATOM 23 OP1 A A2394 56.860 113.994 134.904 1.00 44.71 O
ATOM 24 OP2 A A2394 57.235 115.588 136.870 1.00 44.77 O
ATOM 25 O5' A A2394 59.057 114.045 136.122 1.00 45.20 O
TER
ATOM 1 O3' A B2417 53.667 122.396 140.209 1.00 50.91 O
ATOM 2 P A B2418 53.736 122.396 138.597 1.00 51.18 P
ATOM 3 OP1 A B2418 52.583 123.180 138.090 1.00 50.27 O
ATOM 4 OP2 A B2418 53.934 121.007 138.135 1.00 50.17 O
ATOM 5 O5' A B2418 55.058 123.218 138.265 1.00 49.32 O
ATOM 6 C5' A B2418 55.245 124.546 138.792 1.00 48.87 C
ATOM 7 C4' A B2418 55.743 125.471 137.709 1.00 48.42 C
ATOM 8 O4' A B2418 57.076 125.057 137.318 1.00 48.23 O
ATOM 9 C3' A B2418 54.914 125.486 136.430 1.00 48.63 C
ATOM 10 O3' A B2418 54.966 126.789 135.841 1.00 49.09 O
ATOM 11 C2' A B2418 55.619 124.438 135.573 1.00 47.75 C
ATOM 12 O2' A B2418 55.425 124.627 134.187 1.00 50.61 O
ATOM 13 C1' A B2418 57.083 124.656 135.961 1.00 45.83 C
ATOM 14 N9 A B2418 57.930 123.464 135.864 1.00 41.90 N
ATOM 15 C8 A B2418 57.542 122.154 135.761 1.00 41.37 C
ATOM 16 N7 A B2418 58.538 121.308 135.712 1.00 40.60 N
ATOM 17 C5 A B2418 59.663 122.112 135.779 1.00 41.30 C
ATOM 18 C6 A B2418 61.038 121.815 135.753 1.00 41.40 C
ATOM 19 N6 A B2418 61.523 120.582 135.632 1.00 41.40 N
ATOM 20 N1 A B2418 61.906 122.844 135.845 1.00 40.76 N
ATOM 21 C2 A B2418 61.415 124.087 135.938 1.00 41.46 C
ATOM 22 N3 A B2418 60.144 124.496 135.957 1.00 43.19 N
ATOM 23 C4 A B2418 59.306 123.444 135.874 1.00 42.64 C
ATOM 24 P G B2419 53.608 127.493 135.325 1.00 50.72 P
ATOM 25 OP1 G B2419 52.427 126.829 135.937 1.00 50.36 O
ATOM 26 OP2 G B2419 53.705 127.594 133.844 1.00 52.54 O
ATOM 27 O5' G B2419 53.679 128.966 135.924 1.00 50.88 O
TER
ATOM 2 P C A2393 54.431 119.017 131.938 1.00 36.24 P
ATOM 3 OP1 C A2393 53.359 118.042 132.257 1.00 36.81 O
ATOM 4 OP2 C A2393 54.341 120.390 132.454 1.00 38.23 O
ATOM 5 O5' C A2393 55.821 118.433 132.430 1.00 35.82 O
ATOM 6 C5' C A2393 56.285 117.177 131.949 1.00 38.15 C
ATOM 7 C4' C A2393 57.574 116.825 132.623 1.00 40.82 C
ATOM 8 O4' C A2393 58.608 117.738 132.169 1.00 42.07 O
ATOM 9 C3' C A2393 57.543 116.937 134.140 1.00 42.36 C
ATOM 10 O3' C A2393 58.377 115.941 134.679 1.00 42.93 O
ATOM 11 C2' C A2393 58.152 118.313 134.388 1.00 43.26 C
ATOM 12 O2' C A2393 58.790 118.436 135.644 1.00 45.03 O
ATOM 13 C1' C A2393 59.192 118.378 133.277 1.00 41.89 C
ATOM 14 N1 C A2393 59.594 119.737 132.889 1.00 42.04 N
ATOM 15 C2 C A2393 60.934 119.968 132.580 1.00 43.36 C
ATOM 16 O2 C A2393 61.724 119.005 132.567 1.00 44.49 O
ATOM 17 N3 C A2393 61.342 121.227 132.302 1.00 43.34 N
ATOM 18 C4 C A2393 60.464 122.232 132.324 1.00 44.56 C
ATOM 19 N4 C A2393 60.923 123.468 132.110 1.00 43.25 N
ATOM 20 C5 C A2393 59.077 122.016 132.584 1.00 43.93 C
ATOM 21 C6 C A2393 58.690 120.764 132.855 1.00 43.33 C
ATOM 22 P A A2394 57.766 114.871 135.691 1.00 45.20 P
ATOM 23 OP1 A A2394 56.860 113.994 134.904 1.00 44.71 O
ATOM 24 OP2 A A2394 57.235 115.588 136.870 1.00 44.77 O
ATOM 25 O5' A A2394 59.057 114.045 136.122 1.00 45.20 O
TER
ATOM 1 O3' A B2417 53.667 122.396 140.209 1.00 50.91 O
ATOM 2 P A B2418 53.736 122.396 138.597 1.00 51.18 P
ATOM 3 OP1 A B2418 52.583 123.180 138.090 1.00 50.27 O
ATOM 4 OP2 A B2418 53.934 121.007 138.135 1.00 50.17 O
ATOM 5 O5' A B2418 55.058 123.218 138.265 1.00 49.32 O
ATOM 6 C5' A B2418 55.245 124.546 138.792 1.00 48.87 C
ATOM 7 C4' A B2418 55.743 125.471 137.709 1.00 48.42 C
ATOM 8 O4' A B2418 57.076 125.057 137.318 1.00 48.23 O
ATOM 9 C3' A B2418 54.914 125.486 136.430 1.00 48.63 C
ATOM 10 O3' A B2418 54.966 126.789 135.841 1.00 49.09 O
ATOM 11 C2' A B2418 55.619 124.438 135.573 1.00 47.75 C
ATOM 12 O2' A B2418 55.425 124.627 134.187 1.00 50.61 O
ATOM 13 C1' A B2418 57.083 124.656 135.961 1.00 45.83 C
ATOM 14 N9 A B2418 57.930 123.464 135.864 1.00 41.90 N
ATOM 15 C8 A B2418 57.542 122.154 135.761 1.00 41.37 C
ATOM 16 N7 A B2418 58.538 121.308 135.712 1.00 40.60 N
ATOM 17 C5 A B2418 59.663 122.112 135.779 1.00 41.30 C
ATOM 18 C6 A B2418 61.038 121.815 135.753 1.00 41.40 C
ATOM 19 N6 A B2418 61.523 120.582 135.632 1.00 41.40 N
ATOM 20 N1 A B2418 61.906 122.844 135.845 1.00 40.76 N
ATOM 21 C2 A B2418 61.415 124.087 135.938 1.00 41.46 C
ATOM 22 N3 A B2418 60.144 124.496 135.957 1.00 43.19 N
ATOM 23 C4 A B2418 59.306 123.444 135.874 1.00 42.64 C
ATOM 24 P G B2419 53.608 127.493 135.325 1.00 50.72 P
ATOM 25 OP1 G B2419 52.427 126.829 135.937 1.00 50.36 O
ATOM 26 OP2 G B2419 53.705 127.594 133.844 1.00 52.54 O
ATOM 27 O5' G B2419 53.679 128.966 135.924 1.00 50.88 O
TER
Atoms:
C2: (60.934,119.968,132.580)
OP1: (53.359,118.042,132.257)
OP2: (54.341,120.390,132.454)
C4: (60.464,122.232,132.324)
O5': (55.821,118.433,132.430)
C3': (57.543,116.937,134.140)
C1': (59.192,118.378,133.277)
O4': (58.608,117.738,132.169)
C5': (56.285,117.177,131.949)
P: (54.431,119.017,131.938)
O2: (61.724,119.005,132.567)
C4': (57.574,116.825,132.623)
C2': (58.152,118.313,134.388)
O2': (58.790,118.436,135.644)
N1: (59.594,119.737,132.889)
N3: (61.342,121.227,132.302)
N4: (60.923,123.468,132.110)
C6: (58.690,120.764,132.855)
C5: (59.077,122.016,132.584)
O3': (58.377,115.941,134.679)
OP1: (53.359,118.042,132.257)
OP2: (54.341,120.390,132.454)
C4: (60.464,122.232,132.324)
O5': (55.821,118.433,132.430)
C3': (57.543,116.937,134.140)
C1': (59.192,118.378,133.277)
O4': (58.608,117.738,132.169)
C5': (56.285,117.177,131.949)
P: (54.431,119.017,131.938)
O2: (61.724,119.005,132.567)
C4': (57.574,116.825,132.623)
C2': (58.152,118.313,134.388)
O2': (58.790,118.436,135.644)
N1: (59.594,119.737,132.889)
N3: (61.342,121.227,132.302)
N4: (60.923,123.468,132.110)
C6: (58.690,120.764,132.855)
C5: (59.077,122.016,132.584)
O3': (58.377,115.941,134.679)
OP1: (52.583,123.180,138.090)
OP2: (53.934,121.007,138.135)
C3': (54.914,125.486,136.430)
C1': (57.083,124.656,135.961)
C5': (55.245,124.546,138.792)
O4': (57.076,125.057,137.318)
C8: (57.542,122.154,135.761)
O2': (55.425,124.627,134.187)
C6: (61.038,121.815,135.753)
C5: (59.663,122.112,135.779)
C4: (59.306,123.444,135.874)
P: (53.736,122.396,138.597)
C4': (55.743,125.471,137.709)
C2': (55.619,124.438,135.573)
C2: (61.415,124.087,135.938)
N1: (61.906,122.844,135.845)
N3: (60.144,124.496,135.957)
N6: (61.523,120.582,135.632)
N7: (58.538,121.308,135.712)
N9: (57.930,123.464,135.864)
O5': (55.058,123.218,138.265)
O3': (54.966,126.789,135.841)
OP2: (53.934,121.007,138.135)
C3': (54.914,125.486,136.430)
C1': (57.083,124.656,135.961)
C5': (55.245,124.546,138.792)
O4': (57.076,125.057,137.318)
C8: (57.542,122.154,135.761)
O2': (55.425,124.627,134.187)
C6: (61.038,121.815,135.753)
C5: (59.663,122.112,135.779)
C4: (59.306,123.444,135.874)
P: (53.736,122.396,138.597)
C4': (55.743,125.471,137.709)
C2': (55.619,124.438,135.573)
C2: (61.415,124.087,135.938)
N1: (61.906,122.844,135.845)
N3: (60.144,124.496,135.957)
N6: (61.523,120.582,135.632)
N7: (58.538,121.308,135.712)
N9: (57.930,123.464,135.864)
O5': (55.058,123.218,138.265)
O3': (54.966,126.789,135.841)
Image (generated by PyMOL):