Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02234:02235
Extra
PDB:
ATOM 1 O3' C A2233 52.892 71.965 82.227 1.00 42.15 O
ATOM 2 P C A2234 52.273 72.712 80.947 1.00 42.39 P
ATOM 3 OP1 C A2234 52.096 71.701 79.878 1.00 43.95 O
ATOM 4 OP2 C A2234 53.069 73.922 80.666 1.00 44.14 O
ATOM 5 O5' C A2234 50.839 73.171 81.452 1.00 41.45 O
ATOM 6 C5' C A2234 49.933 72.229 82.041 1.00 40.48 C
ATOM 7 C4' C A2234 48.910 72.950 82.882 1.00 39.80 C
ATOM 8 O4' C A2234 49.575 73.628 83.978 1.00 39.67 O
ATOM 9 C3' C A2234 48.156 74.060 82.181 1.00 38.91 C
ATOM 10 O3' C A2234 47.092 73.549 81.397 1.00 40.71 O
ATOM 11 C2' C A2234 47.678 74.903 83.352 1.00 38.74 C
ATOM 12 O2' C A2234 46.578 74.333 84.024 1.00 39.74 O
ATOM 13 C1' C A2234 48.887 74.830 84.282 1.00 39.12 C
ATOM 14 N1 C A2234 49.820 75.967 84.144 1.00 39.83 N
ATOM 15 C2 C A2234 49.517 77.180 84.788 1.00 41.32 C
ATOM 16 O2 C A2234 48.474 77.271 85.458 1.00 43.88 O
ATOM 17 N3 C A2234 50.365 78.224 84.665 1.00 40.98 N
ATOM 18 C4 C A2234 51.477 78.098 83.944 1.00 40.77 C
ATOM 19 N4 C A2234 52.281 79.158 83.851 1.00 40.65 N
ATOM 20 C5 C A2234 51.814 76.881 83.285 1.00 41.51 C
ATOM 21 C6 C A2234 50.964 75.852 83.408 1.00 40.39 C
ATOM 22 P A A2235 46.586 74.368 80.108 1.00 42.92 P
ATOM 23 OP1 A A2235 46.187 75.719 80.558 1.00 43.49 O
ATOM 24 OP2 A A2235 45.617 73.542 79.353 1.00 45.12 O
ATOM 25 O5' A A2235 47.879 74.518 79.198 1.00 41.36 O
TER
ATOM 1 O3' C B2234 47.092 73.549 81.397 1.00 40.71 O
ATOM 2 P A B2235 46.586 74.368 80.108 1.00 42.92 P
ATOM 3 OP1 A B2235 46.187 75.719 80.558 1.00 43.49 O
ATOM 4 OP2 A B2235 45.617 73.542 79.353 1.00 45.12 O
ATOM 5 O5' A B2235 47.879 74.518 79.198 1.00 41.36 O
ATOM 6 C5' A B2235 47.753 74.903 77.824 1.00 40.54 C
ATOM 7 C4' A B2235 48.861 75.847 77.442 1.00 40.43 C
ATOM 8 O4' A B2235 48.715 77.094 78.173 1.00 40.82 O
ATOM 9 C3' A B2235 50.270 75.358 77.730 1.00 40.57 C
ATOM 10 O3' A B2235 51.110 75.832 76.702 1.00 41.94 O
ATOM 11 C2' A B2235 50.601 76.045 79.049 1.00 40.12 C
ATOM 12 O2' A B2235 51.987 76.208 79.249 1.00 41.10 O
ATOM 13 C1' A B2235 49.917 77.391 78.850 1.00 40.14 C
ATOM 14 N9 A B2235 49.598 78.131 80.074 1.00 41.49 N
ATOM 15 C8 A B2235 48.688 77.819 81.055 1.00 42.18 C
ATOM 16 N7 A B2235 48.632 78.699 82.027 1.00 41.81 N
ATOM 17 C5 A B2235 49.571 79.655 81.663 1.00 42.66 C
ATOM 18 C6 A B2235 49.997 80.844 82.278 1.00 43.21 C
ATOM 19 N6 A B2235 49.518 81.290 83.439 1.00 43.91 N
ATOM 20 N1 A B2235 50.948 81.570 81.649 1.00 42.99 N
ATOM 21 C2 A B2235 51.434 81.120 80.490 1.00 41.10 C
ATOM 22 N3 A B2235 51.122 80.020 79.818 1.00 41.09 N
ATOM 23 C4 A B2235 50.172 79.320 80.464 1.00 41.96 C
ATOM 24 P A B2236 51.749 74.791 75.668 1.00 44.77 P
ATOM 25 OP1 A B2236 50.649 73.921 75.173 1.00 43.27 O
ATOM 26 OP2 A B2236 52.941 74.181 76.315 1.00 43.07 O
ATOM 27 O5' A B2236 52.259 75.705 74.469 1.00 45.59 O
TER
ATOM 2 P C A2234 52.273 72.712 80.947 1.00 42.39 P
ATOM 3 OP1 C A2234 52.096 71.701 79.878 1.00 43.95 O
ATOM 4 OP2 C A2234 53.069 73.922 80.666 1.00 44.14 O
ATOM 5 O5' C A2234 50.839 73.171 81.452 1.00 41.45 O
ATOM 6 C5' C A2234 49.933 72.229 82.041 1.00 40.48 C
ATOM 7 C4' C A2234 48.910 72.950 82.882 1.00 39.80 C
ATOM 8 O4' C A2234 49.575 73.628 83.978 1.00 39.67 O
ATOM 9 C3' C A2234 48.156 74.060 82.181 1.00 38.91 C
ATOM 10 O3' C A2234 47.092 73.549 81.397 1.00 40.71 O
ATOM 11 C2' C A2234 47.678 74.903 83.352 1.00 38.74 C
ATOM 12 O2' C A2234 46.578 74.333 84.024 1.00 39.74 O
ATOM 13 C1' C A2234 48.887 74.830 84.282 1.00 39.12 C
ATOM 14 N1 C A2234 49.820 75.967 84.144 1.00 39.83 N
ATOM 15 C2 C A2234 49.517 77.180 84.788 1.00 41.32 C
ATOM 16 O2 C A2234 48.474 77.271 85.458 1.00 43.88 O
ATOM 17 N3 C A2234 50.365 78.224 84.665 1.00 40.98 N
ATOM 18 C4 C A2234 51.477 78.098 83.944 1.00 40.77 C
ATOM 19 N4 C A2234 52.281 79.158 83.851 1.00 40.65 N
ATOM 20 C5 C A2234 51.814 76.881 83.285 1.00 41.51 C
ATOM 21 C6 C A2234 50.964 75.852 83.408 1.00 40.39 C
ATOM 22 P A A2235 46.586 74.368 80.108 1.00 42.92 P
ATOM 23 OP1 A A2235 46.187 75.719 80.558 1.00 43.49 O
ATOM 24 OP2 A A2235 45.617 73.542 79.353 1.00 45.12 O
ATOM 25 O5' A A2235 47.879 74.518 79.198 1.00 41.36 O
TER
ATOM 1 O3' C B2234 47.092 73.549 81.397 1.00 40.71 O
ATOM 2 P A B2235 46.586 74.368 80.108 1.00 42.92 P
ATOM 3 OP1 A B2235 46.187 75.719 80.558 1.00 43.49 O
ATOM 4 OP2 A B2235 45.617 73.542 79.353 1.00 45.12 O
ATOM 5 O5' A B2235 47.879 74.518 79.198 1.00 41.36 O
ATOM 6 C5' A B2235 47.753 74.903 77.824 1.00 40.54 C
ATOM 7 C4' A B2235 48.861 75.847 77.442 1.00 40.43 C
ATOM 8 O4' A B2235 48.715 77.094 78.173 1.00 40.82 O
ATOM 9 C3' A B2235 50.270 75.358 77.730 1.00 40.57 C
ATOM 10 O3' A B2235 51.110 75.832 76.702 1.00 41.94 O
ATOM 11 C2' A B2235 50.601 76.045 79.049 1.00 40.12 C
ATOM 12 O2' A B2235 51.987 76.208 79.249 1.00 41.10 O
ATOM 13 C1' A B2235 49.917 77.391 78.850 1.00 40.14 C
ATOM 14 N9 A B2235 49.598 78.131 80.074 1.00 41.49 N
ATOM 15 C8 A B2235 48.688 77.819 81.055 1.00 42.18 C
ATOM 16 N7 A B2235 48.632 78.699 82.027 1.00 41.81 N
ATOM 17 C5 A B2235 49.571 79.655 81.663 1.00 42.66 C
ATOM 18 C6 A B2235 49.997 80.844 82.278 1.00 43.21 C
ATOM 19 N6 A B2235 49.518 81.290 83.439 1.00 43.91 N
ATOM 20 N1 A B2235 50.948 81.570 81.649 1.00 42.99 N
ATOM 21 C2 A B2235 51.434 81.120 80.490 1.00 41.10 C
ATOM 22 N3 A B2235 51.122 80.020 79.818 1.00 41.09 N
ATOM 23 C4 A B2235 50.172 79.320 80.464 1.00 41.96 C
ATOM 24 P A B2236 51.749 74.791 75.668 1.00 44.77 P
ATOM 25 OP1 A B2236 50.649 73.921 75.173 1.00 43.27 O
ATOM 26 OP2 A B2236 52.941 74.181 76.315 1.00 43.07 O
ATOM 27 O5' A B2236 52.259 75.705 74.469 1.00 45.59 O
TER
Atoms:
C2: (49.517,77.180,84.788)
OP1: (52.096,71.701,79.878)
OP2: (53.069,73.922,80.666)
C4: (51.477,78.098,83.944)
O5': (50.839,73.171,81.452)
C3': (48.156,74.060,82.181)
C1': (48.887,74.830,84.282)
O4': (49.575,73.628,83.978)
C5': (49.933,72.229,82.041)
P: (52.273,72.712,80.947)
O2: (48.474,77.271,85.458)
C4': (48.910,72.950,82.882)
C2': (47.678,74.903,83.352)
O2': (46.578,74.333,84.024)
N1: (49.820,75.967,84.144)
N3: (50.365,78.224,84.665)
N4: (52.281,79.158,83.851)
C6: (50.964,75.852,83.408)
C5: (51.814,76.881,83.285)
O3': (47.092,73.549,81.397)
OP1: (52.096,71.701,79.878)
OP2: (53.069,73.922,80.666)
C4: (51.477,78.098,83.944)
O5': (50.839,73.171,81.452)
C3': (48.156,74.060,82.181)
C1': (48.887,74.830,84.282)
O4': (49.575,73.628,83.978)
C5': (49.933,72.229,82.041)
P: (52.273,72.712,80.947)
O2: (48.474,77.271,85.458)
C4': (48.910,72.950,82.882)
C2': (47.678,74.903,83.352)
O2': (46.578,74.333,84.024)
N1: (49.820,75.967,84.144)
N3: (50.365,78.224,84.665)
N4: (52.281,79.158,83.851)
C6: (50.964,75.852,83.408)
C5: (51.814,76.881,83.285)
O3': (47.092,73.549,81.397)
OP1: (46.187,75.719,80.558)
OP2: (45.617,73.542,79.353)
C3': (50.270,75.358,77.730)
C1': (49.917,77.391,78.850)
C5': (47.753,74.903,77.824)
O4': (48.715,77.094,78.173)
C8: (48.688,77.819,81.055)
O2': (51.987,76.208,79.249)
C6: (49.997,80.844,82.278)
C5: (49.571,79.655,81.663)
C4: (50.172,79.320,80.464)
P: (46.586,74.368,80.108)
C4': (48.861,75.847,77.442)
C2': (50.601,76.045,79.049)
C2: (51.434,81.120,80.490)
N1: (50.948,81.570,81.649)
N3: (51.122,80.020,79.818)
N6: (49.518,81.290,83.439)
N7: (48.632,78.699,82.027)
N9: (49.598,78.131,80.074)
O5': (47.879,74.518,79.198)
O3': (51.110,75.832,76.702)
OP2: (45.617,73.542,79.353)
C3': (50.270,75.358,77.730)
C1': (49.917,77.391,78.850)
C5': (47.753,74.903,77.824)
O4': (48.715,77.094,78.173)
C8: (48.688,77.819,81.055)
O2': (51.987,76.208,79.249)
C6: (49.997,80.844,82.278)
C5: (49.571,79.655,81.663)
C4: (50.172,79.320,80.464)
P: (46.586,74.368,80.108)
C4': (48.861,75.847,77.442)
C2': (50.601,76.045,79.049)
C2: (51.434,81.120,80.490)
N1: (50.948,81.570,81.649)
N3: (51.122,80.020,79.818)
N6: (49.518,81.290,83.439)
N7: (48.632,78.699,82.027)
N9: (49.598,78.131,80.074)
O5': (47.879,74.518,79.198)
O3': (51.110,75.832,76.702)
Image (generated by PyMOL):