Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1JBR:D8:D9
Extra
PDB:
ATOM 1 O3' U A 7 63.396 33.724 -25.389 1.00 51.00 O
ATOM 2 P C A 8 64.820 34.434 -25.120 1.00 53.99 P
ATOM 3 OP1 C A 8 64.908 35.579 -26.070 1.00 55.94 O
ATOM 4 OP2 C A 8 65.903 33.412 -25.105 1.00 51.89 O
ATOM 5 O5' C A 8 64.711 35.013 -23.642 1.00 49.25 O
ATOM 6 C5' C A 8 63.649 35.881 -23.269 1.00 48.57 C
ATOM 7 C4' C A 8 63.505 35.901 -21.768 1.00 49.70 C
ATOM 8 O4' C A 8 63.155 34.569 -21.297 1.00 49.27 O
ATOM 9 C3' C A 8 64.772 36.254 -21.004 1.00 50.08 C
ATOM 10 O3' C A 8 64.945 37.667 -20.924 1.00 52.53 O
ATOM 11 C2' C A 8 64.518 35.609 -19.646 1.00 49.43 C
ATOM 12 O2' C A 8 63.721 36.389 -18.787 1.00 52.40 O
ATOM 13 C1' C A 8 63.761 34.337 -20.038 1.00 47.15 C
ATOM 14 N1 C A 8 64.627 33.143 -20.121 1.00 44.65 N
ATOM 15 C2 C A 8 64.772 32.334 -18.975 1.00 44.48 C
ATOM 16 O2 C A 8 64.160 32.633 -17.940 1.00 45.95 O
ATOM 17 N3 C A 8 65.581 31.251 -19.025 1.00 41.89 N
ATOM 18 C4 C A 8 66.236 30.960 -20.145 1.00 40.48 C
ATOM 19 N4 C A 8 67.036 29.899 -20.127 1.00 37.63 N
ATOM 20 C5 C A 8 66.102 31.752 -21.330 1.00 41.25 C
ATOM 21 C6 C A 8 65.292 32.823 -21.273 1.00 42.87 C
ATOM 22 P A A 9 66.420 38.288 -20.734 1.00 54.73 P
ATOM 23 OP1 A A 9 66.806 38.108 -19.310 1.00 55.83 O
ATOM 24 OP2 A A 9 66.435 39.643 -21.331 1.00 56.97 O
ATOM 25 O5' A A 9 67.360 37.361 -21.617 1.00 56.13 O
TER
ATOM 1 O3' C B 8 64.945 37.667 -20.924 1.00 52.53 O
ATOM 2 P A B 9 66.420 38.288 -20.734 1.00 54.73 P
ATOM 3 OP1 A B 9 66.806 38.108 -19.310 1.00 55.83 O
ATOM 4 OP2 A B 9 66.435 39.643 -21.331 1.00 56.97 O
ATOM 5 O5' A B 9 67.360 37.361 -21.617 1.00 56.13 O
ATOM 6 C5' A B 9 68.037 37.883 -22.744 1.00 54.44 C
ATOM 7 C4' A B 9 69.149 36.952 -23.171 1.00 55.05 C
ATOM 8 O4' A B 9 69.656 36.218 -22.013 1.00 54.57 O
ATOM 9 C3' A B 9 68.666 35.871 -24.138 1.00 54.61 C
ATOM 10 O3' A B 9 69.768 35.421 -24.919 1.00 55.45 O
ATOM 11 C2' A B 9 68.214 34.765 -23.194 1.00 52.11 C
ATOM 12 O2' A B 9 68.209 33.489 -23.786 1.00 53.57 O
ATOM 13 C1' A B 9 69.300 34.853 -22.128 1.00 52.91 C
ATOM 14 N9 A B 9 68.989 34.291 -20.816 1.00 51.91 N
ATOM 15 C8 A B 9 68.250 34.837 -19.800 1.00 52.44 C
ATOM 16 N7 A B 9 68.126 34.051 -18.758 1.00 52.91 N
ATOM 17 C5 A B 9 68.837 32.912 -19.109 1.00 50.10 C
ATOM 18 C6 A B 9 69.081 31.700 -18.434 1.00 48.01 C
ATOM 19 N6 A B 9 68.604 31.424 -17.220 1.00 46.11 N
ATOM 20 N1 A B 9 69.834 30.770 -19.061 1.00 47.91 N
ATOM 21 C2 A B 9 70.304 31.046 -20.284 1.00 48.99 C
ATOM 22 N3 A B 9 70.139 32.143 -21.024 1.00 48.93 N
ATOM 23 C4 A B 9 69.384 33.049 -20.370 1.00 51.17 C
ATOM 24 P G B 10 70.016 36.041 -26.379 1.00 56.33 P
ATOM 25 OP1 G B 10 69.640 37.484 -26.343 1.00 53.35 O
ATOM 26 OP2 G B 10 69.344 35.129 -27.342 1.00 53.61 O
ATOM 27 O5' G B 10 71.597 35.961 -26.601 1.00 53.82 O
TER
ATOM 2 P C A 8 64.820 34.434 -25.120 1.00 53.99 P
ATOM 3 OP1 C A 8 64.908 35.579 -26.070 1.00 55.94 O
ATOM 4 OP2 C A 8 65.903 33.412 -25.105 1.00 51.89 O
ATOM 5 O5' C A 8 64.711 35.013 -23.642 1.00 49.25 O
ATOM 6 C5' C A 8 63.649 35.881 -23.269 1.00 48.57 C
ATOM 7 C4' C A 8 63.505 35.901 -21.768 1.00 49.70 C
ATOM 8 O4' C A 8 63.155 34.569 -21.297 1.00 49.27 O
ATOM 9 C3' C A 8 64.772 36.254 -21.004 1.00 50.08 C
ATOM 10 O3' C A 8 64.945 37.667 -20.924 1.00 52.53 O
ATOM 11 C2' C A 8 64.518 35.609 -19.646 1.00 49.43 C
ATOM 12 O2' C A 8 63.721 36.389 -18.787 1.00 52.40 O
ATOM 13 C1' C A 8 63.761 34.337 -20.038 1.00 47.15 C
ATOM 14 N1 C A 8 64.627 33.143 -20.121 1.00 44.65 N
ATOM 15 C2 C A 8 64.772 32.334 -18.975 1.00 44.48 C
ATOM 16 O2 C A 8 64.160 32.633 -17.940 1.00 45.95 O
ATOM 17 N3 C A 8 65.581 31.251 -19.025 1.00 41.89 N
ATOM 18 C4 C A 8 66.236 30.960 -20.145 1.00 40.48 C
ATOM 19 N4 C A 8 67.036 29.899 -20.127 1.00 37.63 N
ATOM 20 C5 C A 8 66.102 31.752 -21.330 1.00 41.25 C
ATOM 21 C6 C A 8 65.292 32.823 -21.273 1.00 42.87 C
ATOM 22 P A A 9 66.420 38.288 -20.734 1.00 54.73 P
ATOM 23 OP1 A A 9 66.806 38.108 -19.310 1.00 55.83 O
ATOM 24 OP2 A A 9 66.435 39.643 -21.331 1.00 56.97 O
ATOM 25 O5' A A 9 67.360 37.361 -21.617 1.00 56.13 O
TER
ATOM 1 O3' C B 8 64.945 37.667 -20.924 1.00 52.53 O
ATOM 2 P A B 9 66.420 38.288 -20.734 1.00 54.73 P
ATOM 3 OP1 A B 9 66.806 38.108 -19.310 1.00 55.83 O
ATOM 4 OP2 A B 9 66.435 39.643 -21.331 1.00 56.97 O
ATOM 5 O5' A B 9 67.360 37.361 -21.617 1.00 56.13 O
ATOM 6 C5' A B 9 68.037 37.883 -22.744 1.00 54.44 C
ATOM 7 C4' A B 9 69.149 36.952 -23.171 1.00 55.05 C
ATOM 8 O4' A B 9 69.656 36.218 -22.013 1.00 54.57 O
ATOM 9 C3' A B 9 68.666 35.871 -24.138 1.00 54.61 C
ATOM 10 O3' A B 9 69.768 35.421 -24.919 1.00 55.45 O
ATOM 11 C2' A B 9 68.214 34.765 -23.194 1.00 52.11 C
ATOM 12 O2' A B 9 68.209 33.489 -23.786 1.00 53.57 O
ATOM 13 C1' A B 9 69.300 34.853 -22.128 1.00 52.91 C
ATOM 14 N9 A B 9 68.989 34.291 -20.816 1.00 51.91 N
ATOM 15 C8 A B 9 68.250 34.837 -19.800 1.00 52.44 C
ATOM 16 N7 A B 9 68.126 34.051 -18.758 1.00 52.91 N
ATOM 17 C5 A B 9 68.837 32.912 -19.109 1.00 50.10 C
ATOM 18 C6 A B 9 69.081 31.700 -18.434 1.00 48.01 C
ATOM 19 N6 A B 9 68.604 31.424 -17.220 1.00 46.11 N
ATOM 20 N1 A B 9 69.834 30.770 -19.061 1.00 47.91 N
ATOM 21 C2 A B 9 70.304 31.046 -20.284 1.00 48.99 C
ATOM 22 N3 A B 9 70.139 32.143 -21.024 1.00 48.93 N
ATOM 23 C4 A B 9 69.384 33.049 -20.370 1.00 51.17 C
ATOM 24 P G B 10 70.016 36.041 -26.379 1.00 56.33 P
ATOM 25 OP1 G B 10 69.640 37.484 -26.343 1.00 53.35 O
ATOM 26 OP2 G B 10 69.344 35.129 -27.342 1.00 53.61 O
ATOM 27 O5' G B 10 71.597 35.961 -26.601 1.00 53.82 O
TER
Atoms:
C2: (64.772,32.334,-18.975)
OP1: (64.908,35.579,-26.070)
OP2: (65.903,33.412,-25.105)
C4: (66.236,30.960,-20.145)
O5': (64.711,35.013,-23.642)
C3': (64.772,36.254,-21.004)
C1': (63.761,34.337,-20.038)
O4': (63.155,34.569,-21.297)
C5': (63.649,35.881,-23.269)
P: (64.820,34.434,-25.120)
O2: (64.160,32.633,-17.940)
C4': (63.505,35.901,-21.768)
C2': (64.518,35.609,-19.646)
O2': (63.721,36.389,-18.787)
N1: (64.627,33.143,-20.121)
N3: (65.581,31.251,-19.025)
N4: (67.036,29.899,-20.127)
C6: (65.292,32.823,-21.273)
C5: (66.102,31.752,-21.330)
O3': (64.945,37.667,-20.924)
OP1: (64.908,35.579,-26.070)
OP2: (65.903,33.412,-25.105)
C4: (66.236,30.960,-20.145)
O5': (64.711,35.013,-23.642)
C3': (64.772,36.254,-21.004)
C1': (63.761,34.337,-20.038)
O4': (63.155,34.569,-21.297)
C5': (63.649,35.881,-23.269)
P: (64.820,34.434,-25.120)
O2: (64.160,32.633,-17.940)
C4': (63.505,35.901,-21.768)
C2': (64.518,35.609,-19.646)
O2': (63.721,36.389,-18.787)
N1: (64.627,33.143,-20.121)
N3: (65.581,31.251,-19.025)
N4: (67.036,29.899,-20.127)
C6: (65.292,32.823,-21.273)
C5: (66.102,31.752,-21.330)
O3': (64.945,37.667,-20.924)
OP1: (66.806,38.108,-19.310)
OP2: (66.435,39.643,-21.331)
C3': (68.666,35.871,-24.138)
C1': (69.300,34.853,-22.128)
C5': (68.037,37.883,-22.744)
O4': (69.656,36.218,-22.013)
C8: (68.250,34.837,-19.800)
O2': (68.209,33.489,-23.786)
C6: (69.081,31.700,-18.434)
C5: (68.837,32.912,-19.109)
C4: (69.384,33.049,-20.370)
P: (66.420,38.288,-20.734)
C4': (69.149,36.952,-23.171)
C2': (68.214,34.765,-23.194)
C2: (70.304,31.046,-20.284)
N1: (69.834,30.770,-19.061)
N3: (70.139,32.143,-21.024)
N6: (68.604,31.424,-17.220)
N7: (68.126,34.051,-18.758)
N9: (68.989,34.291,-20.816)
O5': (67.360,37.361,-21.617)
O3': (69.768,35.421,-24.919)
OP2: (66.435,39.643,-21.331)
C3': (68.666,35.871,-24.138)
C1': (69.300,34.853,-22.128)
C5': (68.037,37.883,-22.744)
O4': (69.656,36.218,-22.013)
C8: (68.250,34.837,-19.800)
O2': (68.209,33.489,-23.786)
C6: (69.081,31.700,-18.434)
C5: (68.837,32.912,-19.109)
C4: (69.384,33.049,-20.370)
P: (66.420,38.288,-20.734)
C4': (69.149,36.952,-23.171)
C2': (68.214,34.765,-23.194)
C2: (70.304,31.046,-20.284)
N1: (69.834,30.770,-19.061)
N3: (70.139,32.143,-21.024)
N6: (68.604,31.424,-17.220)
N7: (68.126,34.051,-18.758)
N9: (68.989,34.291,-20.816)
O5': (67.360,37.361,-21.617)
O3': (69.768,35.421,-24.919)
Image (generated by PyMOL):