Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A344:A345
Extra
PDB:
ATOM 1 O3' C A 343 53.563 126.186 18.152 1.00 65.27 O
ATOM 2 P C A 344 54.358 125.498 16.933 1.00 65.90 P
ATOM 3 OP1 C A 344 55.636 124.924 17.450 1.00 63.58 O
ATOM 4 OP2 C A 344 54.385 126.485 15.819 1.00 67.00 O
ATOM 5 O5' C A 344 53.440 124.268 16.517 1.00 66.44 O
ATOM 6 C5' C A 344 53.217 123.172 17.427 1.00 67.95 C
ATOM 7 C4' C A 344 52.171 122.242 16.864 1.00 68.51 C
ATOM 8 O4' C A 344 50.923 122.960 16.667 1.00 68.83 O
ATOM 9 C3' C A 344 52.494 121.685 15.493 1.00 69.10 C
ATOM 10 O3' C A 344 53.371 120.572 15.624 1.00 69.55 O
ATOM 11 C2' C A 344 51.115 121.312 14.968 1.00 69.31 C
ATOM 12 O2' C A 344 50.657 120.103 15.539 1.00 69.97 O
ATOM 13 C1' C A 344 50.267 122.471 15.507 1.00 69.64 C
ATOM 14 N1 C A 344 50.077 123.600 14.567 1.00 70.77 N
ATOM 15 C2 C A 344 48.964 123.595 13.696 1.00 71.00 C
ATOM 16 O2 C A 344 48.151 122.661 13.756 1.00 71.87 O
ATOM 17 N3 C A 344 48.806 124.617 12.819 1.00 70.63 N
ATOM 18 C4 C A 344 49.692 125.621 12.792 1.00 70.57 C
ATOM 19 N4 C A 344 49.509 126.605 11.902 1.00 70.11 N
ATOM 20 C5 C A 344 50.812 125.661 13.673 1.00 70.67 C
ATOM 21 C6 C A 344 50.967 124.641 14.534 1.00 71.45 C
ATOM 22 P A A 345 54.407 120.230 14.447 1.00 70.19 P
ATOM 23 OP1 A A 345 53.647 119.932 13.204 1.00 70.23 O
ATOM 24 OP2 A A 345 55.412 119.259 14.946 1.00 69.91 O
ATOM 25 O5' A A 345 55.181 121.591 14.198 1.00 71.37 O
TER
ATOM 1 O3' C B 344 53.371 120.572 15.624 1.00 69.55 O
ATOM 2 P A B 345 54.407 120.230 14.447 1.00 70.19 P
ATOM 3 OP1 A B 345 53.647 119.932 13.204 1.00 70.23 O
ATOM 4 OP2 A B 345 55.412 119.259 14.946 1.00 69.91 O
ATOM 5 O5' A B 345 55.181 121.591 14.198 1.00 71.37 O
ATOM 6 C5' A B 345 56.370 121.593 13.412 1.00 72.51 C
ATOM 7 C4' A B 345 56.431 122.836 12.585 1.00 73.89 C
ATOM 8 O4' A B 345 55.413 122.808 11.546 1.00 74.89 O
ATOM 9 C3' A B 345 56.202 124.116 13.364 1.00 75.21 C
ATOM 10 O3' A B 345 57.049 125.089 12.813 1.00 76.99 O
ATOM 11 C2' A B 345 54.749 124.457 13.065 1.00 75.63 C
ATOM 12 O2' A B 345 54.498 125.850 13.148 1.00 75.65 O
ATOM 13 C1' A B 345 54.626 123.978 11.623 1.00 75.75 C
ATOM 14 N9 A B 345 53.253 123.650 11.239 1.00 76.35 N
ATOM 15 C8 A B 345 52.497 122.549 11.576 1.00 76.24 C
ATOM 16 N7 A B 345 51.285 122.569 11.080 1.00 76.49 N
ATOM 17 C5 A B 345 51.239 123.758 10.359 1.00 77.30 C
ATOM 18 C6 A B 345 50.220 124.373 9.588 1.00 77.58 C
ATOM 19 N6 A B 345 49.003 123.850 9.406 1.00 77.91 N
ATOM 20 N1 A B 345 50.502 125.562 9.007 1.00 76.64 N
ATOM 21 C2 A B 345 51.719 126.091 9.186 1.00 76.78 C
ATOM 22 N3 A B 345 52.756 125.612 9.880 1.00 77.10 N
ATOM 23 C4 A B 345 52.446 124.431 10.448 1.00 76.90 C
ATOM 24 P G B 346 58.348 125.528 13.619 1.00 78.67 P
ATOM 25 OP1 G B 346 58.656 124.450 14.604 1.00 79.16 O
ATOM 26 OP2 G B 346 58.057 126.901 14.102 1.00 79.24 O
ATOM 27 O5' G B 346 59.488 125.552 12.502 1.00 80.63 O
TER
ATOM 2 P C A 344 54.358 125.498 16.933 1.00 65.90 P
ATOM 3 OP1 C A 344 55.636 124.924 17.450 1.00 63.58 O
ATOM 4 OP2 C A 344 54.385 126.485 15.819 1.00 67.00 O
ATOM 5 O5' C A 344 53.440 124.268 16.517 1.00 66.44 O
ATOM 6 C5' C A 344 53.217 123.172 17.427 1.00 67.95 C
ATOM 7 C4' C A 344 52.171 122.242 16.864 1.00 68.51 C
ATOM 8 O4' C A 344 50.923 122.960 16.667 1.00 68.83 O
ATOM 9 C3' C A 344 52.494 121.685 15.493 1.00 69.10 C
ATOM 10 O3' C A 344 53.371 120.572 15.624 1.00 69.55 O
ATOM 11 C2' C A 344 51.115 121.312 14.968 1.00 69.31 C
ATOM 12 O2' C A 344 50.657 120.103 15.539 1.00 69.97 O
ATOM 13 C1' C A 344 50.267 122.471 15.507 1.00 69.64 C
ATOM 14 N1 C A 344 50.077 123.600 14.567 1.00 70.77 N
ATOM 15 C2 C A 344 48.964 123.595 13.696 1.00 71.00 C
ATOM 16 O2 C A 344 48.151 122.661 13.756 1.00 71.87 O
ATOM 17 N3 C A 344 48.806 124.617 12.819 1.00 70.63 N
ATOM 18 C4 C A 344 49.692 125.621 12.792 1.00 70.57 C
ATOM 19 N4 C A 344 49.509 126.605 11.902 1.00 70.11 N
ATOM 20 C5 C A 344 50.812 125.661 13.673 1.00 70.67 C
ATOM 21 C6 C A 344 50.967 124.641 14.534 1.00 71.45 C
ATOM 22 P A A 345 54.407 120.230 14.447 1.00 70.19 P
ATOM 23 OP1 A A 345 53.647 119.932 13.204 1.00 70.23 O
ATOM 24 OP2 A A 345 55.412 119.259 14.946 1.00 69.91 O
ATOM 25 O5' A A 345 55.181 121.591 14.198 1.00 71.37 O
TER
ATOM 1 O3' C B 344 53.371 120.572 15.624 1.00 69.55 O
ATOM 2 P A B 345 54.407 120.230 14.447 1.00 70.19 P
ATOM 3 OP1 A B 345 53.647 119.932 13.204 1.00 70.23 O
ATOM 4 OP2 A B 345 55.412 119.259 14.946 1.00 69.91 O
ATOM 5 O5' A B 345 55.181 121.591 14.198 1.00 71.37 O
ATOM 6 C5' A B 345 56.370 121.593 13.412 1.00 72.51 C
ATOM 7 C4' A B 345 56.431 122.836 12.585 1.00 73.89 C
ATOM 8 O4' A B 345 55.413 122.808 11.546 1.00 74.89 O
ATOM 9 C3' A B 345 56.202 124.116 13.364 1.00 75.21 C
ATOM 10 O3' A B 345 57.049 125.089 12.813 1.00 76.99 O
ATOM 11 C2' A B 345 54.749 124.457 13.065 1.00 75.63 C
ATOM 12 O2' A B 345 54.498 125.850 13.148 1.00 75.65 O
ATOM 13 C1' A B 345 54.626 123.978 11.623 1.00 75.75 C
ATOM 14 N9 A B 345 53.253 123.650 11.239 1.00 76.35 N
ATOM 15 C8 A B 345 52.497 122.549 11.576 1.00 76.24 C
ATOM 16 N7 A B 345 51.285 122.569 11.080 1.00 76.49 N
ATOM 17 C5 A B 345 51.239 123.758 10.359 1.00 77.30 C
ATOM 18 C6 A B 345 50.220 124.373 9.588 1.00 77.58 C
ATOM 19 N6 A B 345 49.003 123.850 9.406 1.00 77.91 N
ATOM 20 N1 A B 345 50.502 125.562 9.007 1.00 76.64 N
ATOM 21 C2 A B 345 51.719 126.091 9.186 1.00 76.78 C
ATOM 22 N3 A B 345 52.756 125.612 9.880 1.00 77.10 N
ATOM 23 C4 A B 345 52.446 124.431 10.448 1.00 76.90 C
ATOM 24 P G B 346 58.348 125.528 13.619 1.00 78.67 P
ATOM 25 OP1 G B 346 58.656 124.450 14.604 1.00 79.16 O
ATOM 26 OP2 G B 346 58.057 126.901 14.102 1.00 79.24 O
ATOM 27 O5' G B 346 59.488 125.552 12.502 1.00 80.63 O
TER
Atoms:
C2: (48.964,123.595,13.696)
OP1: (55.636,124.924,17.450)
OP2: (54.385,126.485,15.819)
C4: (49.692,125.621,12.792)
O5': (53.440,124.268,16.517)
C3': (52.494,121.685,15.493)
C1': (50.267,122.471,15.507)
O4': (50.923,122.960,16.667)
C5': (53.217,123.172,17.427)
P: (54.358,125.498,16.933)
O2: (48.151,122.661,13.756)
C4': (52.171,122.242,16.864)
C2': (51.115,121.312,14.968)
O2': (50.657,120.103,15.539)
N1: (50.077,123.600,14.567)
N3: (48.806,124.617,12.819)
N4: (49.509,126.605,11.902)
C6: (50.967,124.641,14.534)
C5: (50.812,125.661,13.673)
O3': (53.371,120.572,15.624)
OP1: (55.636,124.924,17.450)
OP2: (54.385,126.485,15.819)
C4: (49.692,125.621,12.792)
O5': (53.440,124.268,16.517)
C3': (52.494,121.685,15.493)
C1': (50.267,122.471,15.507)
O4': (50.923,122.960,16.667)
C5': (53.217,123.172,17.427)
P: (54.358,125.498,16.933)
O2: (48.151,122.661,13.756)
C4': (52.171,122.242,16.864)
C2': (51.115,121.312,14.968)
O2': (50.657,120.103,15.539)
N1: (50.077,123.600,14.567)
N3: (48.806,124.617,12.819)
N4: (49.509,126.605,11.902)
C6: (50.967,124.641,14.534)
C5: (50.812,125.661,13.673)
O3': (53.371,120.572,15.624)
OP1: (53.647,119.932,13.204)
OP2: (55.412,119.259,14.946)
C3': (56.202,124.116,13.364)
C1': (54.626,123.978,11.623)
C5': (56.370,121.593,13.412)
O4': (55.413,122.808,11.546)
C8: (52.497,122.549,11.576)
O2': (54.498,125.850,13.148)
C6: (50.220,124.373,9.588)
C5: (51.239,123.758,10.359)
C4: (52.446,124.431,10.448)
P: (54.407,120.230,14.447)
C4': (56.431,122.836,12.585)
C2': (54.749,124.457,13.065)
C2: (51.719,126.091,9.186)
N1: (50.502,125.562,9.007)
N3: (52.756,125.612,9.880)
N6: (49.003,123.850,9.406)
N7: (51.285,122.569,11.080)
N9: (53.253,123.650,11.239)
O5': (55.181,121.591,14.198)
O3': (57.049,125.089,12.813)
OP2: (55.412,119.259,14.946)
C3': (56.202,124.116,13.364)
C1': (54.626,123.978,11.623)
C5': (56.370,121.593,13.412)
O4': (55.413,122.808,11.546)
C8: (52.497,122.549,11.576)
O2': (54.498,125.850,13.148)
C6: (50.220,124.373,9.588)
C5: (51.239,123.758,10.359)
C4: (52.446,124.431,10.448)
P: (54.407,120.230,14.447)
C4': (56.431,122.836,12.585)
C2': (54.749,124.457,13.065)
C2: (51.719,126.091,9.186)
N1: (50.502,125.562,9.007)
N3: (52.756,125.612,9.880)
N6: (49.003,123.850,9.406)
N7: (51.285,122.569,11.080)
N9: (53.253,123.650,11.239)
O5': (55.181,121.591,14.198)
O3': (57.049,125.089,12.813)
Image (generated by PyMOL):