Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A2007:A1257
Extra
PDB:
ATOM 1 O3' A A2006 -25.419 128.131 182.607 1.00 0.09 O
ATOM 2 P A A2007 -26.662 128.977 183.103 1.00 0.01 P
ATOM 3 OP1 A A2007 -26.419 130.370 182.702 1.00 0.01 O
ATOM 4 OP2 A A2007 -26.877 128.666 184.534 1.00 0.01 O
ATOM 5 O5' A A2007 -27.829 128.394 182.251 1.00 0.01 O
ATOM 6 C5' A A2007 -28.112 128.939 180.999 1.00 0.01 C
ATOM 7 C4' A A2007 -28.857 127.955 180.202 1.00 0.01 C
ATOM 8 O4' A A2007 -28.274 126.659 180.438 1.00 0.01 O
ATOM 9 C3' A A2007 -30.305 127.803 180.586 1.00 0.01 C
ATOM 10 O3' A A2007 -31.121 128.715 179.892 1.00 0.01 O
ATOM 11 C2' A A2007 -30.598 126.361 180.233 1.00 0.01 C
ATOM 12 O2' A A2007 -30.870 126.242 178.840 1.00 0.01 O
ATOM 13 C1' A A2007 -29.260 125.684 180.519 1.00 0.01 C
ATOM 14 N9 A A2007 -29.192 125.092 181.857 1.00 0.01 N
ATOM 15 C8 A A2007 -28.958 125.763 183.009 1.00 0.01 C
ATOM 16 N7 A A2007 -28.938 124.978 184.070 1.00 0.01 N
ATOM 17 C5 A A2007 -29.125 123.694 183.587 1.00 0.01 C
ATOM 18 C6 A A2007 -29.192 122.428 184.226 1.00 0.01 C
ATOM 19 N6 A A2007 -29.063 122.170 185.540 1.00 0.01 N
ATOM 20 N1 A A2007 -29.412 121.386 183.425 1.00 0.01 N
ATOM 21 C2 A A2007 -29.548 121.610 182.113 1.00 0.01 C
ATOM 22 N3 A A2007 -29.500 122.736 181.394 1.00 0.01 N
ATOM 23 C4 A A2007 -29.277 123.767 182.209 1.00 0.01 C
ATOM 24 P U A2008 -31.757 129.969 180.640 1.00 0.01 P
ATOM 25 OP1 U A2008 -32.285 130.892 179.595 1.00 0.01 O
ATOM 26 OP2 U A2008 -30.740 130.465 181.610 1.00 0.01 O
ATOM 27 O5' U A2008 -32.968 129.319 181.391 1.00 0.01 O
TER
ATOM 1 O3' U B1256 -31.243 122.955 193.584 1.00 0.01 O
ATOM 2 P A B1257 -30.319 121.710 194.053 1.00 0.28 P
ATOM 3 OP1 A B1257 -31.099 120.912 195.010 1.00 0.28 O
ATOM 4 OP2 A B1257 -29.007 122.236 194.474 1.00 0.28 O
ATOM 5 O5' A B1257 -30.192 120.919 192.713 1.00 0.28 O
ATOM 6 C5' A B1257 -31.352 120.730 191.925 1.00 0.28 C
ATOM 7 C4' A B1257 -31.016 120.717 190.485 1.00 0.28 C
ATOM 8 O4' A B1257 -30.825 122.067 190.011 1.00 0.28 O
ATOM 9 C3' A B1257 -29.738 120.003 190.159 1.00 0.28 C
ATOM 10 O3' A B1257 -29.938 118.602 190.085 1.00 0.28 O
ATOM 11 C2' A B1257 -29.314 120.656 188.849 1.00 0.28 C
ATOM 12 O2' A B1257 -29.986 120.063 187.751 1.00 0.28 O
ATOM 13 C1' A B1257 -29.828 122.095 189.029 1.00 0.28 C
ATOM 14 N9 A B1257 -28.788 123.002 189.502 1.00 0.28 N
ATOM 15 C8 A B1257 -28.205 122.906 190.728 1.00 0.28 C
ATOM 16 N7 A B1257 -27.313 123.833 190.938 1.00 0.28 N
ATOM 17 C5 A B1257 -27.338 124.616 189.797 1.00 0.28 C
ATOM 18 C6 A B1257 -26.611 125.760 189.428 1.00 0.28 C
ATOM 19 N6 A B1257 -25.694 126.337 190.207 1.00 0.28 N
ATOM 20 N1 A B1257 -26.845 126.299 188.223 1.00 0.28 N
ATOM 21 C2 A B1257 -27.763 125.696 187.457 1.00 0.28 C
ATOM 22 N3 A B1257 -28.510 124.608 187.690 1.00 0.28 N
ATOM 23 C4 A B1257 -28.253 124.110 188.903 1.00 0.28 C
ATOM 24 P A B1258 -28.695 117.599 190.073 1.00 0.14 P
ATOM 25 OP1 A B1258 -27.594 118.311 189.398 1.00 0.14 O
ATOM 26 OP2 A B1258 -29.166 116.327 189.505 1.00 0.14 O
ATOM 27 O5' A B1258 -28.356 117.406 191.614 1.00 0.14 O
TER
ATOM 2 P A A2007 -26.662 128.977 183.103 1.00 0.01 P
ATOM 3 OP1 A A2007 -26.419 130.370 182.702 1.00 0.01 O
ATOM 4 OP2 A A2007 -26.877 128.666 184.534 1.00 0.01 O
ATOM 5 O5' A A2007 -27.829 128.394 182.251 1.00 0.01 O
ATOM 6 C5' A A2007 -28.112 128.939 180.999 1.00 0.01 C
ATOM 7 C4' A A2007 -28.857 127.955 180.202 1.00 0.01 C
ATOM 8 O4' A A2007 -28.274 126.659 180.438 1.00 0.01 O
ATOM 9 C3' A A2007 -30.305 127.803 180.586 1.00 0.01 C
ATOM 10 O3' A A2007 -31.121 128.715 179.892 1.00 0.01 O
ATOM 11 C2' A A2007 -30.598 126.361 180.233 1.00 0.01 C
ATOM 12 O2' A A2007 -30.870 126.242 178.840 1.00 0.01 O
ATOM 13 C1' A A2007 -29.260 125.684 180.519 1.00 0.01 C
ATOM 14 N9 A A2007 -29.192 125.092 181.857 1.00 0.01 N
ATOM 15 C8 A A2007 -28.958 125.763 183.009 1.00 0.01 C
ATOM 16 N7 A A2007 -28.938 124.978 184.070 1.00 0.01 N
ATOM 17 C5 A A2007 -29.125 123.694 183.587 1.00 0.01 C
ATOM 18 C6 A A2007 -29.192 122.428 184.226 1.00 0.01 C
ATOM 19 N6 A A2007 -29.063 122.170 185.540 1.00 0.01 N
ATOM 20 N1 A A2007 -29.412 121.386 183.425 1.00 0.01 N
ATOM 21 C2 A A2007 -29.548 121.610 182.113 1.00 0.01 C
ATOM 22 N3 A A2007 -29.500 122.736 181.394 1.00 0.01 N
ATOM 23 C4 A A2007 -29.277 123.767 182.209 1.00 0.01 C
ATOM 24 P U A2008 -31.757 129.969 180.640 1.00 0.01 P
ATOM 25 OP1 U A2008 -32.285 130.892 179.595 1.00 0.01 O
ATOM 26 OP2 U A2008 -30.740 130.465 181.610 1.00 0.01 O
ATOM 27 O5' U A2008 -32.968 129.319 181.391 1.00 0.01 O
TER
ATOM 1 O3' U B1256 -31.243 122.955 193.584 1.00 0.01 O
ATOM 2 P A B1257 -30.319 121.710 194.053 1.00 0.28 P
ATOM 3 OP1 A B1257 -31.099 120.912 195.010 1.00 0.28 O
ATOM 4 OP2 A B1257 -29.007 122.236 194.474 1.00 0.28 O
ATOM 5 O5' A B1257 -30.192 120.919 192.713 1.00 0.28 O
ATOM 6 C5' A B1257 -31.352 120.730 191.925 1.00 0.28 C
ATOM 7 C4' A B1257 -31.016 120.717 190.485 1.00 0.28 C
ATOM 8 O4' A B1257 -30.825 122.067 190.011 1.00 0.28 O
ATOM 9 C3' A B1257 -29.738 120.003 190.159 1.00 0.28 C
ATOM 10 O3' A B1257 -29.938 118.602 190.085 1.00 0.28 O
ATOM 11 C2' A B1257 -29.314 120.656 188.849 1.00 0.28 C
ATOM 12 O2' A B1257 -29.986 120.063 187.751 1.00 0.28 O
ATOM 13 C1' A B1257 -29.828 122.095 189.029 1.00 0.28 C
ATOM 14 N9 A B1257 -28.788 123.002 189.502 1.00 0.28 N
ATOM 15 C8 A B1257 -28.205 122.906 190.728 1.00 0.28 C
ATOM 16 N7 A B1257 -27.313 123.833 190.938 1.00 0.28 N
ATOM 17 C5 A B1257 -27.338 124.616 189.797 1.00 0.28 C
ATOM 18 C6 A B1257 -26.611 125.760 189.428 1.00 0.28 C
ATOM 19 N6 A B1257 -25.694 126.337 190.207 1.00 0.28 N
ATOM 20 N1 A B1257 -26.845 126.299 188.223 1.00 0.28 N
ATOM 21 C2 A B1257 -27.763 125.696 187.457 1.00 0.28 C
ATOM 22 N3 A B1257 -28.510 124.608 187.690 1.00 0.28 N
ATOM 23 C4 A B1257 -28.253 124.110 188.903 1.00 0.28 C
ATOM 24 P A B1258 -28.695 117.599 190.073 1.00 0.14 P
ATOM 25 OP1 A B1258 -27.594 118.311 189.398 1.00 0.14 O
ATOM 26 OP2 A B1258 -29.166 116.327 189.505 1.00 0.14 O
ATOM 27 O5' A B1258 -28.356 117.406 191.614 1.00 0.14 O
TER
Atoms:
OP1: (-26.419,130.370,182.702)
OP2: (-26.877,128.666,184.534)
C3': (-30.305,127.803,180.586)
C1': (-29.260,125.684,180.519)
C5': (-28.112,128.939,180.999)
O4': (-28.274,126.659,180.438)
C8: (-28.958,125.763,183.009)
O2': (-30.870,126.242,178.840)
C6: (-29.192,122.428,184.226)
C5: (-29.125,123.694,183.587)
C4: (-29.277,123.767,182.209)
P: (-26.662,128.977,183.103)
C4': (-28.857,127.955,180.202)
C2': (-30.598,126.361,180.233)
C2: (-29.548,121.610,182.113)
N1: (-29.412,121.386,183.425)
N3: (-29.500,122.736,181.394)
N6: (-29.063,122.170,185.540)
N7: (-28.938,124.978,184.070)
N9: (-29.192,125.092,181.857)
O5': (-27.829,128.394,182.251)
O3': (-31.121,128.715,179.892)
OP2: (-26.877,128.666,184.534)
C3': (-30.305,127.803,180.586)
C1': (-29.260,125.684,180.519)
C5': (-28.112,128.939,180.999)
O4': (-28.274,126.659,180.438)
C8: (-28.958,125.763,183.009)
O2': (-30.870,126.242,178.840)
C6: (-29.192,122.428,184.226)
C5: (-29.125,123.694,183.587)
C4: (-29.277,123.767,182.209)
P: (-26.662,128.977,183.103)
C4': (-28.857,127.955,180.202)
C2': (-30.598,126.361,180.233)
C2: (-29.548,121.610,182.113)
N1: (-29.412,121.386,183.425)
N3: (-29.500,122.736,181.394)
N6: (-29.063,122.170,185.540)
N7: (-28.938,124.978,184.070)
N9: (-29.192,125.092,181.857)
O5': (-27.829,128.394,182.251)
O3': (-31.121,128.715,179.892)
OP1: (-31.099,120.912,195.010)
OP2: (-29.007,122.236,194.474)
C3': (-29.738,120.003,190.159)
C1': (-29.828,122.095,189.029)
C5': (-31.352,120.730,191.925)
O4': (-30.825,122.067,190.011)
C8: (-28.205,122.906,190.728)
O2': (-29.986,120.063,187.751)
C6: (-26.611,125.760,189.428)
C5: (-27.338,124.616,189.797)
C4: (-28.253,124.110,188.903)
P: (-30.319,121.710,194.053)
C4': (-31.016,120.717,190.485)
C2': (-29.314,120.656,188.849)
C2: (-27.763,125.696,187.457)
N1: (-26.845,126.299,188.223)
N3: (-28.510,124.608,187.690)
N6: (-25.694,126.337,190.207)
N7: (-27.313,123.833,190.938)
N9: (-28.788,123.002,189.502)
O5': (-30.192,120.919,192.713)
O3': (-29.938,118.602,190.085)
OP2: (-29.007,122.236,194.474)
C3': (-29.738,120.003,190.159)
C1': (-29.828,122.095,189.029)
C5': (-31.352,120.730,191.925)
O4': (-30.825,122.067,190.011)
C8: (-28.205,122.906,190.728)
O2': (-29.986,120.063,187.751)
C6: (-26.611,125.760,189.428)
C5: (-27.338,124.616,189.797)
C4: (-28.253,124.110,188.903)
P: (-30.319,121.710,194.053)
C4': (-31.016,120.717,190.485)
C2': (-29.314,120.656,188.849)
C2: (-27.763,125.696,187.457)
N1: (-26.845,126.299,188.223)
N3: (-28.510,124.608,187.690)
N6: (-25.694,126.337,190.207)
N7: (-27.313,123.833,190.938)
N9: (-28.788,123.002,189.502)
O5': (-30.192,120.919,192.713)
O3': (-29.938,118.602,190.085)
Image (generated by PyMOL):