Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01188:01189
Extra
PDB:
ATOM 1 O3' C A1187 50.706 104.230 141.124 1.00 36.89 O
ATOM 2 P C A1188 51.272 104.915 139.792 1.00 36.79 P
ATOM 3 OP1 C A1188 52.018 106.128 140.199 1.00 36.57 O
ATOM 4 OP2 C A1188 50.154 105.040 138.838 1.00 38.60 O
ATOM 5 O5' C A1188 52.305 103.839 139.239 1.00 36.12 O
ATOM 6 C5' C A1188 53.510 103.542 139.965 1.00 35.62 C
ATOM 7 C4' C A1188 54.202 102.356 139.356 1.00 36.57 C
ATOM 8 O4' C A1188 53.327 101.208 139.452 1.00 37.01 O
ATOM 9 C3' C A1188 54.513 102.482 137.876 1.00 38.16 C
ATOM 10 O3' C A1188 55.742 103.177 137.689 1.00 41.10 O
ATOM 11 C2' C A1188 54.563 101.025 137.429 1.00 38.03 C
ATOM 12 O2' C A1188 55.784 100.380 137.730 1.00 38.05 O
ATOM 13 C1' C A1188 53.453 100.412 138.289 1.00 36.92 C
ATOM 14 N1 C A1188 52.135 100.357 137.634 1.00 36.96 N
ATOM 15 C2 C A1188 51.772 99.198 136.944 1.00 36.92 C
ATOM 16 O2 C A1188 52.578 98.261 136.881 1.00 39.37 O
ATOM 17 N3 C A1188 50.555 99.130 136.357 1.00 35.94 N
ATOM 18 C4 C A1188 49.718 100.165 136.433 1.00 35.47 C
ATOM 19 N4 C A1188 48.528 100.047 135.846 1.00 33.50 N
ATOM 20 C5 C A1188 50.065 101.365 137.118 1.00 36.67 C
ATOM 21 C6 C A1188 51.271 101.418 137.699 1.00 36.99 C
ATOM 22 P A A1189 56.075 103.857 136.269 1.00 43.92 P
ATOM 23 OP1 A A1189 55.948 102.815 135.219 1.00 43.53 O
ATOM 24 OP2 A A1189 57.357 104.592 136.425 1.00 41.64 O
ATOM 25 O5' A A1189 54.917 104.925 136.045 1.00 41.05 O
TER
ATOM 1 O3' C B1188 55.742 103.177 137.689 1.00 41.10 O
ATOM 2 P A B1189 56.075 103.857 136.269 1.00 43.92 P
ATOM 3 OP1 A B1189 55.948 102.815 135.219 1.00 43.53 O
ATOM 4 OP2 A B1189 57.357 104.592 136.425 1.00 41.64 O
ATOM 5 O5' A B1189 54.917 104.925 136.045 1.00 41.05 O
ATOM 6 C5' A B1189 55.124 106.057 135.184 1.00 38.93 C
ATOM 7 C4' A B1189 53.802 106.577 134.678 1.00 39.40 C
ATOM 8 O4' A B1189 53.198 105.560 133.842 1.00 41.29 O
ATOM 9 C3' A B1189 52.762 106.931 135.735 1.00 39.31 C
ATOM 10 O3' A B1189 51.954 108.005 135.260 1.00 37.93 O
ATOM 11 C2' A B1189 51.945 105.645 135.832 1.00 39.22 C
ATOM 12 O2' A B1189 50.620 105.863 136.267 1.00 38.77 O
ATOM 13 C1' A B1189 51.953 105.167 134.383 1.00 39.16 C
ATOM 14 N9 A B1189 51.858 103.721 134.223 1.00 38.62 N
ATOM 15 C8 A B1189 52.847 102.798 134.456 1.00 40.99 C
ATOM 16 N7 A B1189 52.506 101.571 134.152 1.00 43.21 N
ATOM 17 C5 A B1189 51.200 101.691 133.703 1.00 41.37 C
ATOM 18 C6 A B1189 50.284 100.752 133.209 1.00 41.33 C
ATOM 19 N6 A B1189 50.557 99.453 133.071 1.00 41.29 N
ATOM 20 N1 A B1189 49.062 101.199 132.849 1.00 40.18 N
ATOM 21 C2 A B1189 48.797 102.501 132.974 1.00 38.80 C
ATOM 22 N3 A B1189 49.578 103.482 133.414 1.00 39.27 N
ATOM 23 C4 A B1189 50.780 103.007 133.766 1.00 39.20 C
ATOM 24 P A B1190 52.438 109.521 135.478 1.00 38.77 P
ATOM 25 OP1 A B1190 52.844 109.721 136.884 1.00 39.52 O
ATOM 26 OP2 A B1190 51.389 110.384 134.900 1.00 40.87 O
ATOM 27 O5' A B1190 53.752 109.637 134.581 1.00 38.68 O
TER
ATOM 2 P C A1188 51.272 104.915 139.792 1.00 36.79 P
ATOM 3 OP1 C A1188 52.018 106.128 140.199 1.00 36.57 O
ATOM 4 OP2 C A1188 50.154 105.040 138.838 1.00 38.60 O
ATOM 5 O5' C A1188 52.305 103.839 139.239 1.00 36.12 O
ATOM 6 C5' C A1188 53.510 103.542 139.965 1.00 35.62 C
ATOM 7 C4' C A1188 54.202 102.356 139.356 1.00 36.57 C
ATOM 8 O4' C A1188 53.327 101.208 139.452 1.00 37.01 O
ATOM 9 C3' C A1188 54.513 102.482 137.876 1.00 38.16 C
ATOM 10 O3' C A1188 55.742 103.177 137.689 1.00 41.10 O
ATOM 11 C2' C A1188 54.563 101.025 137.429 1.00 38.03 C
ATOM 12 O2' C A1188 55.784 100.380 137.730 1.00 38.05 O
ATOM 13 C1' C A1188 53.453 100.412 138.289 1.00 36.92 C
ATOM 14 N1 C A1188 52.135 100.357 137.634 1.00 36.96 N
ATOM 15 C2 C A1188 51.772 99.198 136.944 1.00 36.92 C
ATOM 16 O2 C A1188 52.578 98.261 136.881 1.00 39.37 O
ATOM 17 N3 C A1188 50.555 99.130 136.357 1.00 35.94 N
ATOM 18 C4 C A1188 49.718 100.165 136.433 1.00 35.47 C
ATOM 19 N4 C A1188 48.528 100.047 135.846 1.00 33.50 N
ATOM 20 C5 C A1188 50.065 101.365 137.118 1.00 36.67 C
ATOM 21 C6 C A1188 51.271 101.418 137.699 1.00 36.99 C
ATOM 22 P A A1189 56.075 103.857 136.269 1.00 43.92 P
ATOM 23 OP1 A A1189 55.948 102.815 135.219 1.00 43.53 O
ATOM 24 OP2 A A1189 57.357 104.592 136.425 1.00 41.64 O
ATOM 25 O5' A A1189 54.917 104.925 136.045 1.00 41.05 O
TER
ATOM 1 O3' C B1188 55.742 103.177 137.689 1.00 41.10 O
ATOM 2 P A B1189 56.075 103.857 136.269 1.00 43.92 P
ATOM 3 OP1 A B1189 55.948 102.815 135.219 1.00 43.53 O
ATOM 4 OP2 A B1189 57.357 104.592 136.425 1.00 41.64 O
ATOM 5 O5' A B1189 54.917 104.925 136.045 1.00 41.05 O
ATOM 6 C5' A B1189 55.124 106.057 135.184 1.00 38.93 C
ATOM 7 C4' A B1189 53.802 106.577 134.678 1.00 39.40 C
ATOM 8 O4' A B1189 53.198 105.560 133.842 1.00 41.29 O
ATOM 9 C3' A B1189 52.762 106.931 135.735 1.00 39.31 C
ATOM 10 O3' A B1189 51.954 108.005 135.260 1.00 37.93 O
ATOM 11 C2' A B1189 51.945 105.645 135.832 1.00 39.22 C
ATOM 12 O2' A B1189 50.620 105.863 136.267 1.00 38.77 O
ATOM 13 C1' A B1189 51.953 105.167 134.383 1.00 39.16 C
ATOM 14 N9 A B1189 51.858 103.721 134.223 1.00 38.62 N
ATOM 15 C8 A B1189 52.847 102.798 134.456 1.00 40.99 C
ATOM 16 N7 A B1189 52.506 101.571 134.152 1.00 43.21 N
ATOM 17 C5 A B1189 51.200 101.691 133.703 1.00 41.37 C
ATOM 18 C6 A B1189 50.284 100.752 133.209 1.00 41.33 C
ATOM 19 N6 A B1189 50.557 99.453 133.071 1.00 41.29 N
ATOM 20 N1 A B1189 49.062 101.199 132.849 1.00 40.18 N
ATOM 21 C2 A B1189 48.797 102.501 132.974 1.00 38.80 C
ATOM 22 N3 A B1189 49.578 103.482 133.414 1.00 39.27 N
ATOM 23 C4 A B1189 50.780 103.007 133.766 1.00 39.20 C
ATOM 24 P A B1190 52.438 109.521 135.478 1.00 38.77 P
ATOM 25 OP1 A B1190 52.844 109.721 136.884 1.00 39.52 O
ATOM 26 OP2 A B1190 51.389 110.384 134.900 1.00 40.87 O
ATOM 27 O5' A B1190 53.752 109.637 134.581 1.00 38.68 O
TER
Atoms:
C2: (51.772,99.198,136.944)
OP1: (52.018,106.128,140.199)
OP2: (50.154,105.040,138.838)
C4: (49.718,100.165,136.433)
O5': (52.305,103.839,139.239)
C3': (54.513,102.482,137.876)
C1': (53.453,100.412,138.289)
O4': (53.327,101.208,139.452)
C5': (53.510,103.542,139.965)
P: (51.272,104.915,139.792)
O2: (52.578,98.261,136.881)
C4': (54.202,102.356,139.356)
C2': (54.563,101.025,137.429)
O2': (55.784,100.380,137.730)
N1: (52.135,100.357,137.634)
N3: (50.555,99.130,136.357)
N4: (48.528,100.047,135.846)
C6: (51.271,101.418,137.699)
C5: (50.065,101.365,137.118)
O3': (55.742,103.177,137.689)
OP1: (52.018,106.128,140.199)
OP2: (50.154,105.040,138.838)
C4: (49.718,100.165,136.433)
O5': (52.305,103.839,139.239)
C3': (54.513,102.482,137.876)
C1': (53.453,100.412,138.289)
O4': (53.327,101.208,139.452)
C5': (53.510,103.542,139.965)
P: (51.272,104.915,139.792)
O2: (52.578,98.261,136.881)
C4': (54.202,102.356,139.356)
C2': (54.563,101.025,137.429)
O2': (55.784,100.380,137.730)
N1: (52.135,100.357,137.634)
N3: (50.555,99.130,136.357)
N4: (48.528,100.047,135.846)
C6: (51.271,101.418,137.699)
C5: (50.065,101.365,137.118)
O3': (55.742,103.177,137.689)
OP1: (55.948,102.815,135.219)
OP2: (57.357,104.592,136.425)
C3': (52.762,106.931,135.735)
C1': (51.953,105.167,134.383)
C5': (55.124,106.057,135.184)
O4': (53.198,105.560,133.842)
C8: (52.847,102.798,134.456)
O2': (50.620,105.863,136.267)
C6: (50.284,100.752,133.209)
C5: (51.200,101.691,133.703)
C4: (50.780,103.007,133.766)
P: (56.075,103.857,136.269)
C4': (53.802,106.577,134.678)
C2': (51.945,105.645,135.832)
C2: (48.797,102.501,132.974)
N1: (49.062,101.199,132.849)
N3: (49.578,103.482,133.414)
N6: (50.557,99.453,133.071)
N7: (52.506,101.571,134.152)
N9: (51.858,103.721,134.223)
O5': (54.917,104.925,136.045)
O3': (51.954,108.005,135.260)
OP2: (57.357,104.592,136.425)
C3': (52.762,106.931,135.735)
C1': (51.953,105.167,134.383)
C5': (55.124,106.057,135.184)
O4': (53.198,105.560,133.842)
C8: (52.847,102.798,134.456)
O2': (50.620,105.863,136.267)
C6: (50.284,100.752,133.209)
C5: (51.200,101.691,133.703)
C4: (50.780,103.007,133.766)
P: (56.075,103.857,136.269)
C4': (53.802,106.577,134.678)
C2': (51.945,105.645,135.832)
C2: (48.797,102.501,132.974)
N1: (49.062,101.199,132.849)
N3: (49.578,103.482,133.414)
N6: (50.557,99.453,133.071)
N7: (52.506,101.571,134.152)
N9: (51.858,103.721,134.223)
O5': (54.917,104.925,136.045)
O3': (51.954,108.005,135.260)
Image (generated by PyMOL):