Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:075:076
Extra
PDB:
ATOM 1 O3' G A 74 40.218 155.868 37.441 1.00 63.45 O
ATOM 2 P C A 75 39.466 156.155 38.823 1.00 65.26 P
ATOM 3 OP1 C A 75 38.079 155.659 38.663 1.00 66.36 O
ATOM 4 OP2 C A 75 39.698 157.565 39.217 1.00 64.32 O
ATOM 5 O5' C A 75 40.203 155.206 39.861 1.00 67.13 O
ATOM 6 C5' C A 75 40.136 153.780 39.720 1.00 70.78 C
ATOM 7 C4' C A 75 40.859 153.105 40.861 1.00 73.38 C
ATOM 8 O4' C A 75 42.290 153.341 40.762 1.00 72.21 O
ATOM 9 C3' C A 75 40.475 153.580 42.253 1.00 73.67 C
ATOM 10 O3' C A 75 39.283 152.915 42.684 1.00 76.34 O
ATOM 11 C2' C A 75 41.708 153.199 43.067 1.00 73.17 C
ATOM 12 O2' C A 75 41.739 151.831 43.406 1.00 73.66 O
ATOM 13 C1' C A 75 42.838 153.458 42.062 1.00 72.81 C
ATOM 14 N1 C A 75 43.485 154.781 42.188 1.00 73.66 N
ATOM 15 C2 C A 75 44.480 154.961 43.161 1.00 73.86 C
ATOM 16 O2 C A 75 44.790 154.005 43.893 1.00 75.06 O
ATOM 17 N3 C A 75 45.079 156.172 43.278 1.00 73.19 N
ATOM 18 C4 C A 75 44.722 157.175 42.473 1.00 72.32 C
ATOM 19 N4 C A 75 45.337 158.349 42.623 1.00 71.40 N
ATOM 20 C5 C A 75 43.717 157.019 41.478 1.00 73.02 C
ATOM 21 C6 C A 75 43.129 155.820 41.371 1.00 73.87 C
ATOM 22 P A A 76 38.265 153.640 43.706 1.00 79.38 P
ATOM 23 OP1 A A 76 38.814 153.521 45.084 1.00 80.21 O
ATOM 24 OP2 A A 76 36.904 153.128 43.421 1.00 79.79 O
ATOM 25 O5' A A 76 38.290 155.179 43.294 1.00 79.14 O
TER
ATOM 1 O3' C B 75 39.283 152.915 42.684 1.00 76.34 O
ATOM 2 P A B 76 38.265 153.640 43.706 1.00 79.38 P
ATOM 3 OP1 A B 76 38.814 153.521 45.084 1.00 80.21 O
ATOM 4 OP2 A B 76 36.904 153.128 43.421 1.00 79.79 O
ATOM 5 O5' A B 76 38.290 155.179 43.294 1.00 79.14 O
ATOM 6 C5' A B 76 37.334 156.113 43.850 1.00 79.30 C
ATOM 7 C4' A B 76 37.858 157.529 43.739 1.00 80.12 C
ATOM 8 O4' A B 76 38.908 157.751 44.724 1.00 78.67 O
ATOM 9 C3' A B 76 38.471 157.885 42.386 1.00 81.46 C
ATOM 10 O3' A B 76 38.277 159.269 42.122 1.00 85.01 O
ATOM 11 C2' A B 76 39.955 157.641 42.631 1.00 80.25 C
ATOM 12 O2' A B 76 40.792 158.357 41.746 1.00 80.78 O
ATOM 13 C1' A B 76 40.094 158.153 44.064 1.00 78.33 C
ATOM 14 N9 A B 76 41.247 157.634 44.801 1.00 76.32 N
ATOM 15 C8 A B 76 41.432 156.389 45.351 1.00 75.13 C
ATOM 16 N7 A B 76 42.579 156.251 45.970 1.00 75.07 N
ATOM 17 C5 A B 76 43.192 157.486 45.816 1.00 74.95 C
ATOM 18 C6 A B 76 44.429 157.992 46.252 1.00 74.65 C
ATOM 19 N6 A B 76 45.307 157.291 46.975 1.00 74.19 N
ATOM 20 N1 A B 76 44.736 159.263 45.921 1.00 74.97 N
ATOM 21 C2 A B 76 43.857 159.971 45.207 1.00 74.75 C
ATOM 22 N3 A B 76 42.665 159.612 44.747 1.00 74.59 N
ATOM 23 C4 A B 76 42.388 158.344 45.090 1.00 75.28 C
ATOM 24 P C B 77 37.102 159.739 41.138 1.00 87.10 P
ATOM 25 OP1 C B 77 36.704 158.593 40.272 1.00 86.81 O
ATOM 26 OP2 C B 77 37.535 161.022 40.508 1.00 85.07 O
ATOM 27 O5' C B 77 35.899 160.048 42.133 1.00 88.32 O
TER
ATOM 2 P C A 75 39.466 156.155 38.823 1.00 65.26 P
ATOM 3 OP1 C A 75 38.079 155.659 38.663 1.00 66.36 O
ATOM 4 OP2 C A 75 39.698 157.565 39.217 1.00 64.32 O
ATOM 5 O5' C A 75 40.203 155.206 39.861 1.00 67.13 O
ATOM 6 C5' C A 75 40.136 153.780 39.720 1.00 70.78 C
ATOM 7 C4' C A 75 40.859 153.105 40.861 1.00 73.38 C
ATOM 8 O4' C A 75 42.290 153.341 40.762 1.00 72.21 O
ATOM 9 C3' C A 75 40.475 153.580 42.253 1.00 73.67 C
ATOM 10 O3' C A 75 39.283 152.915 42.684 1.00 76.34 O
ATOM 11 C2' C A 75 41.708 153.199 43.067 1.00 73.17 C
ATOM 12 O2' C A 75 41.739 151.831 43.406 1.00 73.66 O
ATOM 13 C1' C A 75 42.838 153.458 42.062 1.00 72.81 C
ATOM 14 N1 C A 75 43.485 154.781 42.188 1.00 73.66 N
ATOM 15 C2 C A 75 44.480 154.961 43.161 1.00 73.86 C
ATOM 16 O2 C A 75 44.790 154.005 43.893 1.00 75.06 O
ATOM 17 N3 C A 75 45.079 156.172 43.278 1.00 73.19 N
ATOM 18 C4 C A 75 44.722 157.175 42.473 1.00 72.32 C
ATOM 19 N4 C A 75 45.337 158.349 42.623 1.00 71.40 N
ATOM 20 C5 C A 75 43.717 157.019 41.478 1.00 73.02 C
ATOM 21 C6 C A 75 43.129 155.820 41.371 1.00 73.87 C
ATOM 22 P A A 76 38.265 153.640 43.706 1.00 79.38 P
ATOM 23 OP1 A A 76 38.814 153.521 45.084 1.00 80.21 O
ATOM 24 OP2 A A 76 36.904 153.128 43.421 1.00 79.79 O
ATOM 25 O5' A A 76 38.290 155.179 43.294 1.00 79.14 O
TER
ATOM 1 O3' C B 75 39.283 152.915 42.684 1.00 76.34 O
ATOM 2 P A B 76 38.265 153.640 43.706 1.00 79.38 P
ATOM 3 OP1 A B 76 38.814 153.521 45.084 1.00 80.21 O
ATOM 4 OP2 A B 76 36.904 153.128 43.421 1.00 79.79 O
ATOM 5 O5' A B 76 38.290 155.179 43.294 1.00 79.14 O
ATOM 6 C5' A B 76 37.334 156.113 43.850 1.00 79.30 C
ATOM 7 C4' A B 76 37.858 157.529 43.739 1.00 80.12 C
ATOM 8 O4' A B 76 38.908 157.751 44.724 1.00 78.67 O
ATOM 9 C3' A B 76 38.471 157.885 42.386 1.00 81.46 C
ATOM 10 O3' A B 76 38.277 159.269 42.122 1.00 85.01 O
ATOM 11 C2' A B 76 39.955 157.641 42.631 1.00 80.25 C
ATOM 12 O2' A B 76 40.792 158.357 41.746 1.00 80.78 O
ATOM 13 C1' A B 76 40.094 158.153 44.064 1.00 78.33 C
ATOM 14 N9 A B 76 41.247 157.634 44.801 1.00 76.32 N
ATOM 15 C8 A B 76 41.432 156.389 45.351 1.00 75.13 C
ATOM 16 N7 A B 76 42.579 156.251 45.970 1.00 75.07 N
ATOM 17 C5 A B 76 43.192 157.486 45.816 1.00 74.95 C
ATOM 18 C6 A B 76 44.429 157.992 46.252 1.00 74.65 C
ATOM 19 N6 A B 76 45.307 157.291 46.975 1.00 74.19 N
ATOM 20 N1 A B 76 44.736 159.263 45.921 1.00 74.97 N
ATOM 21 C2 A B 76 43.857 159.971 45.207 1.00 74.75 C
ATOM 22 N3 A B 76 42.665 159.612 44.747 1.00 74.59 N
ATOM 23 C4 A B 76 42.388 158.344 45.090 1.00 75.28 C
ATOM 24 P C B 77 37.102 159.739 41.138 1.00 87.10 P
ATOM 25 OP1 C B 77 36.704 158.593 40.272 1.00 86.81 O
ATOM 26 OP2 C B 77 37.535 161.022 40.508 1.00 85.07 O
ATOM 27 O5' C B 77 35.899 160.048 42.133 1.00 88.32 O
TER
Atoms:
C2: (44.480,154.961,43.161)
OP1: (38.079,155.659,38.663)
OP2: (39.698,157.565,39.217)
C4: (44.722,157.175,42.473)
O5': (40.203,155.206,39.861)
C3': (40.475,153.580,42.253)
C1': (42.838,153.458,42.062)
O4': (42.290,153.341,40.762)
C5': (40.136,153.780,39.720)
P: (39.466,156.155,38.823)
O2: (44.790,154.005,43.893)
C4': (40.859,153.105,40.861)
C2': (41.708,153.199,43.067)
O2': (41.739,151.831,43.406)
N1: (43.485,154.781,42.188)
N3: (45.079,156.172,43.278)
N4: (45.337,158.349,42.623)
C6: (43.129,155.820,41.371)
C5: (43.717,157.019,41.478)
O3': (39.283,152.915,42.684)
OP1: (38.079,155.659,38.663)
OP2: (39.698,157.565,39.217)
C4: (44.722,157.175,42.473)
O5': (40.203,155.206,39.861)
C3': (40.475,153.580,42.253)
C1': (42.838,153.458,42.062)
O4': (42.290,153.341,40.762)
C5': (40.136,153.780,39.720)
P: (39.466,156.155,38.823)
O2: (44.790,154.005,43.893)
C4': (40.859,153.105,40.861)
C2': (41.708,153.199,43.067)
O2': (41.739,151.831,43.406)
N1: (43.485,154.781,42.188)
N3: (45.079,156.172,43.278)
N4: (45.337,158.349,42.623)
C6: (43.129,155.820,41.371)
C5: (43.717,157.019,41.478)
O3': (39.283,152.915,42.684)
OP1: (38.814,153.521,45.084)
OP2: (36.904,153.128,43.421)
C3': (38.471,157.885,42.386)
C1': (40.094,158.153,44.064)
C5': (37.334,156.113,43.850)
O4': (38.908,157.751,44.724)
C8: (41.432,156.389,45.351)
O2': (40.792,158.357,41.746)
C6: (44.429,157.992,46.252)
C5: (43.192,157.486,45.816)
C4: (42.388,158.344,45.090)
P: (38.265,153.640,43.706)
C4': (37.858,157.529,43.739)
C2': (39.955,157.641,42.631)
C2: (43.857,159.971,45.207)
N1: (44.736,159.263,45.921)
N3: (42.665,159.612,44.747)
N6: (45.307,157.291,46.975)
N7: (42.579,156.251,45.970)
N9: (41.247,157.634,44.801)
O5': (38.290,155.179,43.294)
O3': (38.277,159.269,42.122)
OP2: (36.904,153.128,43.421)
C3': (38.471,157.885,42.386)
C1': (40.094,158.153,44.064)
C5': (37.334,156.113,43.850)
O4': (38.908,157.751,44.724)
C8: (41.432,156.389,45.351)
O2': (40.792,158.357,41.746)
C6: (44.429,157.992,46.252)
C5: (43.192,157.486,45.816)
C4: (42.388,158.344,45.090)
P: (38.265,153.640,43.706)
C4': (37.858,157.529,43.739)
C2': (39.955,157.641,42.631)
C2: (43.857,159.971,45.207)
N1: (44.736,159.263,45.921)
N3: (42.665,159.612,44.747)
N6: (45.307,157.291,46.975)
N7: (42.579,156.251,45.970)
N9: (41.247,157.634,44.801)
O5': (38.290,155.179,43.294)
O3': (38.277,159.269,42.122)
Image (generated by PyMOL):