ClaRNA

Doublet info:

Details

Nucleotide types: CA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1Q81:A574:A575

Extra

PDB:
ATOM 1 O3' C A 573 -10.930 84.105 116.612 1.00 82.11 O
ATOM 2 P C A 574 -11.098 84.983 115.264 1.00 82.11 P
ATOM 3 OP1 C A 574 -12.249 84.448 114.490 1.00 80.65 O
ATOM 4 OP2 C A 574 -9.771 85.077 114.612 1.00 82.60 O
ATOM 5 O5' C A 574 -11.510 86.433 115.782 1.00 78.71 O
ATOM 6 C5' C A 574 -12.862 86.719 116.160 1.00 76.47 C
ATOM 7 C4' C A 574 -12.963 88.107 116.734 1.00 76.77 C
ATOM 8 O4' C A 574 -12.058 88.230 117.860 1.00 77.74 O
ATOM 9 C3' C A 574 -12.559 89.242 115.809 1.00 77.25 C
ATOM 10 O3' C A 574 -13.629 89.593 114.935 1.00 77.09 O
ATOM 11 C2' C A 574 -12.230 90.350 116.802 1.00 77.75 C
ATOM 12 O2' C A 574 -13.383 90.974 117.335 1.00 77.97 O
ATOM 13 C1' C A 574 -11.551 89.558 117.923 1.00 78.25 C
ATOM 14 N1 C A 574 -10.069 89.516 117.826 1.00 79.57 N
ATOM 15 C2 C A 574 -9.309 90.628 118.274 1.00 79.71 C
ATOM 16 O2 C A 574 -9.893 91.639 118.716 1.00 78.78 O
ATOM 17 N3 C A 574 -7.959 90.565 118.206 1.00 80.00 N
ATOM 18 C4 C A 574 -7.361 89.472 117.715 1.00 80.19 C
ATOM 19 N4 C A 574 -6.027 89.449 117.680 1.00 80.70 N
ATOM 20 C5 C A 574 -8.100 88.352 117.243 1.00 79.47 C
ATOM 21 C6 C A 574 -9.433 88.413 117.317 1.00 79.82 C
ATOM 22 P A A 575 -13.324 90.074 113.425 1.00 77.37 P
ATOM 23 OP1 A A 575 -12.608 91.380 113.479 1.00 76.37 O
ATOM 24 OP2 A A 575 -14.603 89.980 112.679 1.00 77.49 O
ATOM 25 O5' A A 575 -12.333 88.964 112.849 1.00 76.26 O
TER

ATOM 1 O3' C B 574 -13.629 89.593 114.935 1.00 77.09 O
ATOM 2 P A B 575 -13.324 90.074 113.425 1.00 77.37 P
ATOM 3 OP1 A B 575 -12.608 91.380 113.479 1.00 76.37 O
ATOM 4 OP2 A B 575 -14.603 89.980 112.679 1.00 77.49 O
ATOM 5 O5' A B 575 -12.333 88.964 112.849 1.00 76.26 O
ATOM 6 C5' A B 575 -12.144 88.812 111.428 1.00 76.31 C
ATOM 7 C4' A B 575 -10.687 88.546 111.098 1.00 76.92 C
ATOM 8 O4' A B 575 -9.875 89.674 111.536 1.00 77.95 O
ATOM 9 C3' A B 575 -10.040 87.305 111.706 1.00 76.81 C
ATOM 10 O3' A B 575 -9.136 86.759 110.756 1.00 76.41 O
ATOM 11 C2' A B 575 -9.293 87.871 112.912 1.00 76.67 C
ATOM 12 O2' A B 575 -8.198 87.086 113.346 1.00 75.78 O
ATOM 13 C1' A B 575 -8.819 89.209 112.356 1.00 77.43 C
ATOM 14 N9 A B 575 -8.529 90.219 113.375 1.00 77.74 N
ATOM 15 C8 A B 575 -9.404 91.025 114.066 1.00 77.41 C
ATOM 16 N7 A B 575 -8.818 91.831 114.919 1.00 77.35 N
ATOM 17 C5 A B 575 -7.468 91.537 114.782 1.00 77.94 C
ATOM 18 C6 A B 575 -6.316 92.045 115.414 1.00 77.79 C
ATOM 19 N6 A B 575 -6.342 93.001 116.347 1.00 78.64 N
ATOM 20 N1 A B 575 -5.122 91.532 115.050 1.00 76.96 N
ATOM 21 C2 A B 575 -5.096 90.579 114.113 1.00 77.34 C
ATOM 22 N3 A B 575 -6.101 90.022 113.447 1.00 77.40 N
ATOM 23 C4 A B 575 -7.276 90.549 113.833 1.00 77.92 C
ATOM 24 P G B 576 -9.554 85.441 109.949 1.00 77.27 P
ATOM 25 OP1 G B 576 -11.013 85.543 109.757 1.00 78.28 O
ATOM 26 OP2 G B 576 -8.986 84.259 110.631 1.00 77.59 O
ATOM 27 O5' G B 576 -8.863 85.596 108.521 1.00 78.14 O
TER

Atoms:
C2: (-9.309,90.628,118.274)
OP1: (-12.249,84.448,114.490)
OP2: (-9.771,85.077,114.612)
C4: (-7.361,89.472,117.715)
O5': (-11.510,86.433,115.782)
C3': (-12.559,89.242,115.809)
C1': (-11.551,89.558,117.923)
O4': (-12.058,88.230,117.860)
C5': (-12.862,86.719,116.160)
P: (-11.098,84.983,115.264)
O2: (-9.893,91.639,118.716)
C4': (-12.963,88.107,116.734)
C2': (-12.230,90.350,116.802)
O2': (-13.383,90.974,117.335)
N1: (-10.069,89.516,117.826)
N3: (-7.959,90.565,118.206)
N4: (-6.027,89.449,117.680)
C6: (-9.433,88.413,117.317)
C5: (-8.100,88.352,117.243)
O3': (-13.629,89.593,114.935)
OP1: (-12.608,91.380,113.479)
OP2: (-14.603,89.980,112.679)
C3': (-10.040,87.305,111.706)
C1': (-8.819,89.209,112.356)
C5': (-12.144,88.812,111.428)
O4': (-9.875,89.674,111.536)
C8: (-9.404,91.025,114.066)
O2': (-8.198,87.086,113.346)
C6: (-6.316,92.045,115.414)
C5: (-7.468,91.537,114.782)
C4: (-7.276,90.549,113.833)
P: (-13.324,90.074,113.425)
C4': (-10.687,88.546,111.098)
C2': (-9.293,87.871,112.912)
C2: (-5.096,90.579,114.113)
N1: (-5.122,91.532,115.050)
N3: (-6.101,90.022,113.447)
N6: (-6.342,93.001,116.347)
N7: (-8.818,91.831,114.919)
N9: (-8.529,90.219,113.375)
O5': (-12.333,88.964,112.849)
O3': (-9.136,86.759,110.756)
Image (generated by PyMOL):
PyMOL image
show in jmol