ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1FFK:0243:0240

Extra

PDB:
ATOM 1 O3' A A 242 83.323 141.788 -9.242 1.00 55.63 O
ATOM 2 P C A 243 84.759 141.067 -9.204 1.00 55.93 P
ATOM 3 OP1 C A 243 84.994 140.552 -10.581 1.00 56.88 O
ATOM 4 OP2 C A 243 84.786 140.119 -8.058 1.00 57.42 O
ATOM 5 O5' C A 243 85.791 142.246 -8.891 1.00 56.55 O
ATOM 6 C5' C A 243 86.274 143.113 -9.945 1.00 56.78 C
ATOM 7 C4' C A 243 87.213 144.157 -9.388 1.00 56.05 C
ATOM 8 O4' C A 243 86.506 144.963 -8.416 1.00 56.32 O
ATOM 9 C3' C A 243 88.429 143.630 -8.647 1.00 56.24 C
ATOM 10 O3' C A 243 89.503 143.371 -9.534 1.00 55.98 O
ATOM 11 C2' C A 243 88.776 144.777 -7.709 1.00 56.91 C
ATOM 12 O2' C A 243 89.554 145.777 -8.331 1.00 56.87 O
ATOM 13 C1' C A 243 87.394 145.345 -7.377 1.00 57.12 C
ATOM 14 N1 C A 243 86.869 144.855 -6.082 1.00 57.38 N
ATOM 15 C2 C A 243 87.294 145.486 -4.895 1.00 57.40 C
ATOM 16 O2 C A 243 88.127 146.412 -4.964 1.00 56.76 O
ATOM 17 N3 C A 243 86.793 145.065 -3.707 1.00 58.15 N
ATOM 18 C4 C A 243 85.920 144.052 -3.670 1.00 58.13 C
ATOM 19 N4 C A 243 85.438 143.681 -2.474 1.00 57.94 N
ATOM 20 C5 C A 243 85.495 143.380 -4.854 1.00 58.02 C
ATOM 21 C6 C A 243 85.987 143.811 -6.026 1.00 57.36 C
ATOM 22 P G A 244 90.301 141.979 -9.432 1.00 56.27 P
ATOM 23 OP1 G A 244 91.487 142.083 -10.327 1.00 56.00 O
ATOM 24 OP2 G A 244 89.308 140.876 -9.643 1.00 56.03 O
ATOM 25 O5' G A 244 90.818 141.934 -7.924 1.00 55.14 O
TER

ATOM 1 O3' C B 239 80.867 139.393 4.065 1.00 43.08 O
ATOM 2 P U B 240 79.617 139.882 3.178 1.00 44.86 P
ATOM 3 OP1 U B 240 78.772 140.735 4.064 1.00 43.97 O
ATOM 4 OP2 U B 240 79.009 138.704 2.491 1.00 43.69 O
ATOM 5 O5' U B 240 80.286 140.787 2.052 1.00 45.52 O
ATOM 6 C5' U B 240 81.047 141.951 2.403 1.00 47.01 C
ATOM 7 C4' U B 240 81.643 142.577 1.168 1.00 48.12 C
ATOM 8 O4' U B 240 82.724 141.758 0.654 1.00 47.67 O
ATOM 9 C3' U B 240 80.700 142.732 -0.009 1.00 49.82 C
ATOM 10 O3' U B 240 79.861 143.870 0.121 1.00 51.82 O
ATOM 11 C2' U B 240 81.657 142.822 -1.192 1.00 49.61 C
ATOM 12 O2' U B 240 82.195 144.123 -1.348 1.00 50.06 O
ATOM 13 C1' U B 240 82.770 141.863 -0.759 1.00 48.50 C
ATOM 14 N1 U B 240 82.611 140.521 -1.340 1.00 48.20 N
ATOM 15 C2 U B 240 83.427 140.174 -2.413 1.00 48.25 C
ATOM 16 O2 U B 240 84.306 140.906 -2.847 1.00 48.27 O
ATOM 17 N3 U B 240 83.182 138.932 -2.950 1.00 47.49 N
ATOM 18 C4 U B 240 82.244 138.016 -2.523 1.00 48.13 C
ATOM 19 O4 U B 240 82.150 136.925 -3.098 1.00 49.24 O
ATOM 20 C5 U B 240 81.467 138.438 -1.397 1.00 47.61 C
ATOM 21 C6 U B 240 81.671 139.640 -0.859 1.00 47.38 C
ATOM 22 P C B 241 78.311 143.747 -0.290 1.00 54.25 P
ATOM 23 OP1 C B 241 77.683 145.082 -0.096 1.00 54.80 O
ATOM 24 OP2 C B 241 77.750 142.555 0.426 1.00 54.21 O
ATOM 25 O5' C B 241 78.359 143.424 -1.854 1.00 55.19 O
TER

Atoms:
C2: (87.294,145.486,-4.895)
OP1: (84.994,140.552,-10.581)
OP2: (84.786,140.119,-8.058)
C4: (85.920,144.052,-3.670)
O5': (85.791,142.246,-8.891)
C3': (88.429,143.630,-8.647)
C1': (87.394,145.345,-7.377)
O4': (86.506,144.963,-8.416)
C5': (86.274,143.113,-9.945)
P: (84.759,141.067,-9.204)
O2: (88.127,146.412,-4.964)
C4': (87.213,144.157,-9.388)
C2': (88.776,144.777,-7.709)
O2': (89.554,145.777,-8.331)
N1: (86.869,144.855,-6.082)
N3: (86.793,145.065,-3.707)
N4: (85.438,143.681,-2.474)
C6: (85.987,143.811,-6.026)
C5: (85.495,143.380,-4.854)
O3': (89.503,143.371,-9.534)
C4: (82.244,138.016,-2.523)
N3: (83.182,138.932,-2.950)
OP1: (78.772,140.735,4.064)
OP2: (79.009,138.704,2.491)
C2: (83.427,140.174,-2.413)
C1': (82.770,141.863,-0.759)
C3': (80.700,142.732,-0.009)
O5': (80.286,140.787,2.052)
O4': (82.724,141.758,0.654)
C5': (81.047,141.951,2.403)
P: (79.617,139.882,3.178)
C4': (81.643,142.577,1.168)
C2': (81.657,142.822,-1.192)
O2': (82.195,144.123,-1.348)
N1: (82.611,140.521,-1.340)
O4: (82.150,136.925,-3.098)
O2: (84.306,140.906,-2.847)
C6: (81.671,139.640,-0.859)
C5: (81.467,138.438,-1.397)
O3': (79.861,143.870,0.121)
Image (generated by PyMOL):
PyMOL image
show in jmol