Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1788:A1804
Extra
PDB:
ATOM 1 O3' A A1787 106.300 138.375 93.749 1.00 40.58 O
ATOM 2 P C A1788 105.431 139.156 92.650 1.00 39.54 P
ATOM 3 OP1 C A1788 104.087 139.169 93.243 1.00 38.44 O
ATOM 4 OP2 C A1788 105.640 138.606 91.287 1.00 37.38 O
ATOM 5 O5' C A1788 105.960 140.653 92.681 1.00 40.18 O
ATOM 6 C5' C A1788 106.199 141.329 93.931 1.00 39.68 C
ATOM 7 C4' C A1788 107.029 142.570 93.692 1.00 39.89 C
ATOM 8 O4' C A1788 108.271 142.210 93.040 1.00 39.64 O
ATOM 9 C3' C A1788 106.392 143.546 92.729 1.00 39.37 C
ATOM 10 O3' C A1788 105.420 144.336 93.406 1.00 38.66 O
ATOM 11 C2' C A1788 107.582 144.312 92.155 1.00 38.68 C
ATOM 12 O2' C A1788 108.094 145.376 92.920 1.00 41.13 O
ATOM 13 C1' C A1788 108.642 143.221 92.116 1.00 38.21 C
ATOM 14 N1 C A1788 108.733 142.645 90.781 1.00 37.60 N
ATOM 15 C2 C A1788 109.315 143.398 89.783 1.00 39.84 C
ATOM 16 O2 C A1788 109.789 144.521 90.066 1.00 41.03 O
ATOM 17 N3 C A1788 109.365 142.893 88.534 1.00 41.37 N
ATOM 18 C4 C A1788 108.888 141.673 88.284 1.00 39.62 C
ATOM 19 N4 C A1788 108.984 141.211 87.042 1.00 40.51 N
ATOM 20 C5 C A1788 108.304 140.878 89.293 1.00 38.31 C
ATOM 21 C6 C A1788 108.244 141.400 90.515 1.00 37.61 C
ATOM 22 P U A1789 103.943 144.450 92.800 1.00 37.97 P
ATOM 23 OP1 U A1789 103.106 145.294 93.686 1.00 36.20 O
ATOM 24 OP2 U A1789 103.479 143.085 92.451 1.00 38.91 O
ATOM 25 O5' U A1789 104.159 145.286 91.459 1.00 36.21 O
TER
ATOM 1 O3' A B1803 104.685 135.434 80.346 1.00 37.57 O
ATOM 2 P U B1804 106.185 134.910 80.306 1.00 38.89 P
ATOM 3 OP1 U B1804 106.639 134.862 78.893 1.00 39.05 O
ATOM 4 OP2 U B1804 106.233 133.688 81.141 1.00 37.48 O
ATOM 5 O5' U B1804 106.977 136.057 81.064 1.00 40.45 O
ATOM 6 C5' U B1804 107.062 137.382 80.525 1.00 40.21 C
ATOM 7 C4' U B1804 107.635 138.298 81.566 1.00 40.52 C
ATOM 8 O4' U B1804 106.807 138.225 82.754 1.00 41.12 O
ATOM 9 C3' U B1804 109.003 137.861 82.055 1.00 40.44 C
ATOM 10 O3' U B1804 110.003 138.387 81.183 1.00 40.76 O
ATOM 11 C2' U B1804 109.076 138.479 83.445 1.00 40.85 C
ATOM 12 O2' U B1804 109.445 139.835 83.347 1.00 41.79 O
ATOM 13 C1' U B1804 107.613 138.401 83.907 1.00 40.81 C
ATOM 14 N1 U B1804 107.234 137.369 84.887 1.00 40.23 N
ATOM 15 C2 U B1804 107.277 137.666 86.253 1.00 41.05 C
ATOM 16 O2 U B1804 107.681 138.715 86.703 1.00 42.24 O
ATOM 17 N3 U B1804 106.829 136.662 87.073 1.00 41.77 N
ATOM 18 C4 U B1804 106.367 135.408 86.685 1.00 43.15 C
ATOM 19 O4 U B1804 105.948 134.610 87.533 1.00 45.47 O
ATOM 20 C5 U B1804 106.394 135.178 85.281 1.00 42.37 C
ATOM 21 C6 U B1804 106.817 136.136 84.453 1.00 40.97 C
ATOM 22 P A B1805 110.896 137.392 80.288 1.00 42.57 P
ATOM 23 OP1 A B1805 110.702 137.686 78.843 1.00 39.71 O
ATOM 24 OP2 A B1805 110.627 136.031 80.791 1.00 42.39 O
ATOM 25 O5' A B1805 112.392 137.790 80.666 1.00 42.86 O
TER
ATOM 2 P C A1788 105.431 139.156 92.650 1.00 39.54 P
ATOM 3 OP1 C A1788 104.087 139.169 93.243 1.00 38.44 O
ATOM 4 OP2 C A1788 105.640 138.606 91.287 1.00 37.38 O
ATOM 5 O5' C A1788 105.960 140.653 92.681 1.00 40.18 O
ATOM 6 C5' C A1788 106.199 141.329 93.931 1.00 39.68 C
ATOM 7 C4' C A1788 107.029 142.570 93.692 1.00 39.89 C
ATOM 8 O4' C A1788 108.271 142.210 93.040 1.00 39.64 O
ATOM 9 C3' C A1788 106.392 143.546 92.729 1.00 39.37 C
ATOM 10 O3' C A1788 105.420 144.336 93.406 1.00 38.66 O
ATOM 11 C2' C A1788 107.582 144.312 92.155 1.00 38.68 C
ATOM 12 O2' C A1788 108.094 145.376 92.920 1.00 41.13 O
ATOM 13 C1' C A1788 108.642 143.221 92.116 1.00 38.21 C
ATOM 14 N1 C A1788 108.733 142.645 90.781 1.00 37.60 N
ATOM 15 C2 C A1788 109.315 143.398 89.783 1.00 39.84 C
ATOM 16 O2 C A1788 109.789 144.521 90.066 1.00 41.03 O
ATOM 17 N3 C A1788 109.365 142.893 88.534 1.00 41.37 N
ATOM 18 C4 C A1788 108.888 141.673 88.284 1.00 39.62 C
ATOM 19 N4 C A1788 108.984 141.211 87.042 1.00 40.51 N
ATOM 20 C5 C A1788 108.304 140.878 89.293 1.00 38.31 C
ATOM 21 C6 C A1788 108.244 141.400 90.515 1.00 37.61 C
ATOM 22 P U A1789 103.943 144.450 92.800 1.00 37.97 P
ATOM 23 OP1 U A1789 103.106 145.294 93.686 1.00 36.20 O
ATOM 24 OP2 U A1789 103.479 143.085 92.451 1.00 38.91 O
ATOM 25 O5' U A1789 104.159 145.286 91.459 1.00 36.21 O
TER
ATOM 1 O3' A B1803 104.685 135.434 80.346 1.00 37.57 O
ATOM 2 P U B1804 106.185 134.910 80.306 1.00 38.89 P
ATOM 3 OP1 U B1804 106.639 134.862 78.893 1.00 39.05 O
ATOM 4 OP2 U B1804 106.233 133.688 81.141 1.00 37.48 O
ATOM 5 O5' U B1804 106.977 136.057 81.064 1.00 40.45 O
ATOM 6 C5' U B1804 107.062 137.382 80.525 1.00 40.21 C
ATOM 7 C4' U B1804 107.635 138.298 81.566 1.00 40.52 C
ATOM 8 O4' U B1804 106.807 138.225 82.754 1.00 41.12 O
ATOM 9 C3' U B1804 109.003 137.861 82.055 1.00 40.44 C
ATOM 10 O3' U B1804 110.003 138.387 81.183 1.00 40.76 O
ATOM 11 C2' U B1804 109.076 138.479 83.445 1.00 40.85 C
ATOM 12 O2' U B1804 109.445 139.835 83.347 1.00 41.79 O
ATOM 13 C1' U B1804 107.613 138.401 83.907 1.00 40.81 C
ATOM 14 N1 U B1804 107.234 137.369 84.887 1.00 40.23 N
ATOM 15 C2 U B1804 107.277 137.666 86.253 1.00 41.05 C
ATOM 16 O2 U B1804 107.681 138.715 86.703 1.00 42.24 O
ATOM 17 N3 U B1804 106.829 136.662 87.073 1.00 41.77 N
ATOM 18 C4 U B1804 106.367 135.408 86.685 1.00 43.15 C
ATOM 19 O4 U B1804 105.948 134.610 87.533 1.00 45.47 O
ATOM 20 C5 U B1804 106.394 135.178 85.281 1.00 42.37 C
ATOM 21 C6 U B1804 106.817 136.136 84.453 1.00 40.97 C
ATOM 22 P A B1805 110.896 137.392 80.288 1.00 42.57 P
ATOM 23 OP1 A B1805 110.702 137.686 78.843 1.00 39.71 O
ATOM 24 OP2 A B1805 110.627 136.031 80.791 1.00 42.39 O
ATOM 25 O5' A B1805 112.392 137.790 80.666 1.00 42.86 O
TER
Atoms:
C2: (109.315,143.398,89.783)
OP1: (104.087,139.169,93.243)
OP2: (105.640,138.606,91.287)
C4: (108.888,141.673,88.284)
O5': (105.960,140.653,92.681)
C3': (106.392,143.546,92.729)
C1': (108.642,143.221,92.116)
O4': (108.271,142.210,93.040)
C5': (106.199,141.329,93.931)
P: (105.431,139.156,92.650)
O2: (109.789,144.521,90.066)
C4': (107.029,142.570,93.692)
C2': (107.582,144.312,92.155)
O2': (108.094,145.376,92.920)
N1: (108.733,142.645,90.781)
N3: (109.365,142.893,88.534)
N4: (108.984,141.211,87.042)
C6: (108.244,141.400,90.515)
C5: (108.304,140.878,89.293)
O3': (105.420,144.336,93.406)
OP1: (104.087,139.169,93.243)
OP2: (105.640,138.606,91.287)
C4: (108.888,141.673,88.284)
O5': (105.960,140.653,92.681)
C3': (106.392,143.546,92.729)
C1': (108.642,143.221,92.116)
O4': (108.271,142.210,93.040)
C5': (106.199,141.329,93.931)
P: (105.431,139.156,92.650)
O2: (109.789,144.521,90.066)
C4': (107.029,142.570,93.692)
C2': (107.582,144.312,92.155)
O2': (108.094,145.376,92.920)
N1: (108.733,142.645,90.781)
N3: (109.365,142.893,88.534)
N4: (108.984,141.211,87.042)
C6: (108.244,141.400,90.515)
C5: (108.304,140.878,89.293)
O3': (105.420,144.336,93.406)
C4: (106.367,135.408,86.685)
N3: (106.829,136.662,87.073)
OP1: (106.639,134.862,78.893)
OP2: (106.233,133.688,81.141)
C2: (107.277,137.666,86.253)
C1': (107.613,138.401,83.907)
C3': (109.003,137.861,82.055)
O5': (106.977,136.057,81.064)
O4': (106.807,138.225,82.754)
C5': (107.062,137.382,80.525)
P: (106.185,134.910,80.306)
C4': (107.635,138.298,81.566)
C2': (109.076,138.479,83.445)
O2': (109.445,139.835,83.347)
N1: (107.234,137.369,84.887)
O4: (105.948,134.610,87.533)
O2: (107.681,138.715,86.703)
C6: (106.817,136.136,84.453)
C5: (106.394,135.178,85.281)
O3': (110.003,138.387,81.183)
N3: (106.829,136.662,87.073)
OP1: (106.639,134.862,78.893)
OP2: (106.233,133.688,81.141)
C2: (107.277,137.666,86.253)
C1': (107.613,138.401,83.907)
C3': (109.003,137.861,82.055)
O5': (106.977,136.057,81.064)
O4': (106.807,138.225,82.754)
C5': (107.062,137.382,80.525)
P: (106.185,134.910,80.306)
C4': (107.635,138.298,81.566)
C2': (109.076,138.479,83.445)
O2': (109.445,139.835,83.347)
N1: (107.234,137.369,84.887)
O4: (105.948,134.610,87.533)
O2: (107.681,138.715,86.703)
C6: (106.817,136.136,84.453)
C5: (106.394,135.178,85.281)
O3': (110.003,138.387,81.183)
Image (generated by PyMOL):