Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A216:A199
Extra
PDB:
ATOM 1 O3' A A 215 66.472 96.168 30.832 1.00 47.84 O
ATOM 2 P C A 216 65.305 96.268 29.728 1.00 48.20 P
ATOM 3 OP1 C A 216 65.695 97.219 28.658 1.00 48.57 O
ATOM 4 OP2 C A 216 64.004 96.449 30.433 1.00 49.20 O
ATOM 5 O5' C A 216 65.303 94.826 29.067 1.00 49.10 O
ATOM 6 C5' C A 216 66.424 94.372 28.302 1.00 48.71 C
ATOM 7 C4' C A 216 66.247 92.918 27.952 1.00 49.89 C
ATOM 8 O4' C A 216 66.095 92.152 29.179 1.00 50.01 O
ATOM 9 C3' C A 216 64.987 92.551 27.182 1.00 50.57 C
ATOM 10 O3' C A 216 65.074 92.840 25.800 1.00 50.34 O
ATOM 11 C2' C A 216 64.911 91.061 27.441 1.00 50.96 C
ATOM 12 O2' C A 216 65.906 90.383 26.704 1.00 51.93 O
ATOM 13 C1' C A 216 65.270 91.017 28.928 1.00 50.86 C
ATOM 14 N1 C A 216 64.058 91.094 29.781 1.00 50.55 N
ATOM 15 C2 C A 216 63.445 89.905 30.211 1.00 49.74 C
ATOM 16 O2 C A 216 63.907 88.807 29.846 1.00 48.71 O
ATOM 17 N3 C A 216 62.358 89.985 31.008 1.00 50.18 N
ATOM 18 C4 C A 216 61.873 91.178 31.374 1.00 50.33 C
ATOM 19 N4 C A 216 60.810 91.212 32.191 1.00 51.70 N
ATOM 20 C5 C A 216 62.454 92.388 30.933 1.00 50.15 C
ATOM 21 C6 C A 216 63.537 92.305 30.149 1.00 50.51 C
ATOM 22 P G A 217 63.821 93.518 25.063 1.00 51.58 P
ATOM 23 OP1 G A 217 64.044 93.474 23.597 1.00 52.22 O
ATOM 24 OP2 G A 217 63.583 94.828 25.726 1.00 52.15 O
ATOM 25 O5' G A 217 62.623 92.513 25.378 1.00 52.30 O
TER
ATOM 1 O3' U B 198 52.362 93.379 36.641 1.00 44.46 O
ATOM 2 P U B 199 53.317 92.717 37.759 1.00 44.44 P
ATOM 3 OP1 U B 199 52.571 91.613 38.406 1.00 42.87 O
ATOM 4 OP2 U B 199 53.866 93.806 38.599 1.00 45.90 O
ATOM 5 O5' U B 199 54.529 92.091 36.932 1.00 42.93 O
ATOM 6 C5' U B 199 54.351 90.902 36.143 1.00 45.28 C
ATOM 7 C4' U B 199 55.593 90.609 35.348 1.00 46.10 C
ATOM 8 O4' U B 199 55.899 91.758 34.520 1.00 46.86 O
ATOM 9 C3' U B 199 56.834 90.387 36.196 1.00 46.93 C
ATOM 10 O3' U B 199 56.970 89.017 36.560 1.00 46.06 O
ATOM 11 C2' U B 199 57.961 90.795 35.263 1.00 48.44 C
ATOM 12 O2' U B 199 58.376 89.720 34.445 1.00 48.93 O
ATOM 13 C1' U B 199 57.305 91.930 34.462 1.00 49.96 C
ATOM 14 N1 U B 199 57.643 93.261 34.991 1.00 52.89 N
ATOM 15 C2 U B 199 58.771 93.850 34.486 1.00 53.64 C
ATOM 16 O2 U B 199 59.457 93.322 33.620 1.00 55.57 O
ATOM 17 N3 U B 199 59.079 95.072 35.021 1.00 54.77 N
ATOM 18 C4 U B 199 58.394 95.752 35.997 1.00 55.15 C
ATOM 19 O4 U B 199 58.847 96.822 36.423 1.00 55.42 O
ATOM 20 C5 U B 199 57.223 95.089 36.467 1.00 55.30 C
ATOM 21 C6 U B 199 56.890 93.893 35.955 1.00 54.34 C
ATOM 22 P A B 200 57.834 88.613 37.852 1.00 46.93 P
ATOM 23 OP1 A B 200 59.207 89.177 37.696 1.00 47.43 O
ATOM 24 OP2 A B 200 57.683 87.171 38.165 1.00 45.79 O
ATOM 25 O5' A B 200 57.097 89.415 39.001 1.00 46.94 O
TER
ATOM 2 P C A 216 65.305 96.268 29.728 1.00 48.20 P
ATOM 3 OP1 C A 216 65.695 97.219 28.658 1.00 48.57 O
ATOM 4 OP2 C A 216 64.004 96.449 30.433 1.00 49.20 O
ATOM 5 O5' C A 216 65.303 94.826 29.067 1.00 49.10 O
ATOM 6 C5' C A 216 66.424 94.372 28.302 1.00 48.71 C
ATOM 7 C4' C A 216 66.247 92.918 27.952 1.00 49.89 C
ATOM 8 O4' C A 216 66.095 92.152 29.179 1.00 50.01 O
ATOM 9 C3' C A 216 64.987 92.551 27.182 1.00 50.57 C
ATOM 10 O3' C A 216 65.074 92.840 25.800 1.00 50.34 O
ATOM 11 C2' C A 216 64.911 91.061 27.441 1.00 50.96 C
ATOM 12 O2' C A 216 65.906 90.383 26.704 1.00 51.93 O
ATOM 13 C1' C A 216 65.270 91.017 28.928 1.00 50.86 C
ATOM 14 N1 C A 216 64.058 91.094 29.781 1.00 50.55 N
ATOM 15 C2 C A 216 63.445 89.905 30.211 1.00 49.74 C
ATOM 16 O2 C A 216 63.907 88.807 29.846 1.00 48.71 O
ATOM 17 N3 C A 216 62.358 89.985 31.008 1.00 50.18 N
ATOM 18 C4 C A 216 61.873 91.178 31.374 1.00 50.33 C
ATOM 19 N4 C A 216 60.810 91.212 32.191 1.00 51.70 N
ATOM 20 C5 C A 216 62.454 92.388 30.933 1.00 50.15 C
ATOM 21 C6 C A 216 63.537 92.305 30.149 1.00 50.51 C
ATOM 22 P G A 217 63.821 93.518 25.063 1.00 51.58 P
ATOM 23 OP1 G A 217 64.044 93.474 23.597 1.00 52.22 O
ATOM 24 OP2 G A 217 63.583 94.828 25.726 1.00 52.15 O
ATOM 25 O5' G A 217 62.623 92.513 25.378 1.00 52.30 O
TER
ATOM 1 O3' U B 198 52.362 93.379 36.641 1.00 44.46 O
ATOM 2 P U B 199 53.317 92.717 37.759 1.00 44.44 P
ATOM 3 OP1 U B 199 52.571 91.613 38.406 1.00 42.87 O
ATOM 4 OP2 U B 199 53.866 93.806 38.599 1.00 45.90 O
ATOM 5 O5' U B 199 54.529 92.091 36.932 1.00 42.93 O
ATOM 6 C5' U B 199 54.351 90.902 36.143 1.00 45.28 C
ATOM 7 C4' U B 199 55.593 90.609 35.348 1.00 46.10 C
ATOM 8 O4' U B 199 55.899 91.758 34.520 1.00 46.86 O
ATOM 9 C3' U B 199 56.834 90.387 36.196 1.00 46.93 C
ATOM 10 O3' U B 199 56.970 89.017 36.560 1.00 46.06 O
ATOM 11 C2' U B 199 57.961 90.795 35.263 1.00 48.44 C
ATOM 12 O2' U B 199 58.376 89.720 34.445 1.00 48.93 O
ATOM 13 C1' U B 199 57.305 91.930 34.462 1.00 49.96 C
ATOM 14 N1 U B 199 57.643 93.261 34.991 1.00 52.89 N
ATOM 15 C2 U B 199 58.771 93.850 34.486 1.00 53.64 C
ATOM 16 O2 U B 199 59.457 93.322 33.620 1.00 55.57 O
ATOM 17 N3 U B 199 59.079 95.072 35.021 1.00 54.77 N
ATOM 18 C4 U B 199 58.394 95.752 35.997 1.00 55.15 C
ATOM 19 O4 U B 199 58.847 96.822 36.423 1.00 55.42 O
ATOM 20 C5 U B 199 57.223 95.089 36.467 1.00 55.30 C
ATOM 21 C6 U B 199 56.890 93.893 35.955 1.00 54.34 C
ATOM 22 P A B 200 57.834 88.613 37.852 1.00 46.93 P
ATOM 23 OP1 A B 200 59.207 89.177 37.696 1.00 47.43 O
ATOM 24 OP2 A B 200 57.683 87.171 38.165 1.00 45.79 O
ATOM 25 O5' A B 200 57.097 89.415 39.001 1.00 46.94 O
TER
Atoms:
C2: (63.445,89.905,30.211)
OP1: (65.695,97.219,28.658)
OP2: (64.004,96.449,30.433)
C4: (61.873,91.178,31.374)
O5': (65.303,94.826,29.067)
C3': (64.987,92.551,27.182)
C1': (65.270,91.017,28.928)
O4': (66.095,92.152,29.179)
C5': (66.424,94.372,28.302)
P: (65.305,96.268,29.728)
O2: (63.907,88.807,29.846)
C4': (66.247,92.918,27.952)
C2': (64.911,91.061,27.441)
O2': (65.906,90.383,26.704)
N1: (64.058,91.094,29.781)
N3: (62.358,89.985,31.008)
N4: (60.810,91.212,32.191)
C6: (63.537,92.305,30.149)
C5: (62.454,92.388,30.933)
O3': (65.074,92.840,25.800)
OP1: (65.695,97.219,28.658)
OP2: (64.004,96.449,30.433)
C4: (61.873,91.178,31.374)
O5': (65.303,94.826,29.067)
C3': (64.987,92.551,27.182)
C1': (65.270,91.017,28.928)
O4': (66.095,92.152,29.179)
C5': (66.424,94.372,28.302)
P: (65.305,96.268,29.728)
O2: (63.907,88.807,29.846)
C4': (66.247,92.918,27.952)
C2': (64.911,91.061,27.441)
O2': (65.906,90.383,26.704)
N1: (64.058,91.094,29.781)
N3: (62.358,89.985,31.008)
N4: (60.810,91.212,32.191)
C6: (63.537,92.305,30.149)
C5: (62.454,92.388,30.933)
O3': (65.074,92.840,25.800)
C4: (58.394,95.752,35.997)
N3: (59.079,95.072,35.021)
OP1: (52.571,91.613,38.406)
OP2: (53.866,93.806,38.599)
C2: (58.771,93.850,34.486)
C1': (57.305,91.930,34.462)
C3': (56.834,90.387,36.196)
O5': (54.529,92.091,36.932)
O4': (55.899,91.758,34.520)
C5': (54.351,90.902,36.143)
P: (53.317,92.717,37.759)
C4': (55.593,90.609,35.348)
C2': (57.961,90.795,35.263)
O2': (58.376,89.720,34.445)
N1: (57.643,93.261,34.991)
O4: (58.847,96.822,36.423)
O2: (59.457,93.322,33.620)
C6: (56.890,93.893,35.955)
C5: (57.223,95.089,36.467)
O3': (56.970,89.017,36.560)
N3: (59.079,95.072,35.021)
OP1: (52.571,91.613,38.406)
OP2: (53.866,93.806,38.599)
C2: (58.771,93.850,34.486)
C1': (57.305,91.930,34.462)
C3': (56.834,90.387,36.196)
O5': (54.529,92.091,36.932)
O4': (55.899,91.758,34.520)
C5': (54.351,90.902,36.143)
P: (53.317,92.717,37.759)
C4': (55.593,90.609,35.348)
C2': (57.961,90.795,35.263)
O2': (58.376,89.720,34.445)
N1: (57.643,93.261,34.991)
O4: (58.847,96.822,36.423)
O2: (59.457,93.322,33.620)
C6: (56.890,93.893,35.955)
C5: (57.223,95.089,36.467)
O3': (56.970,89.017,36.560)
Image (generated by PyMOL):