Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2543:A2529
Extra
PDB:
ATOM 1 O3' A A2542 65.586 130.572 159.970 1.00 63.78 O
ATOM 2 P C A2543 64.788 131.819 159.346 1.00 63.84 P
ATOM 3 OP1 C A2543 64.117 131.398 158.082 1.00 62.27 O
ATOM 4 OP2 C A2543 65.712 132.973 159.340 1.00 63.85 O
ATOM 5 O5' C A2543 63.644 132.087 160.402 1.00 62.13 O
ATOM 6 C5' C A2543 62.666 131.101 160.670 1.00 61.74 C
ATOM 7 C4' C A2543 61.906 131.500 161.884 1.00 62.88 C
ATOM 8 O4' C A2543 62.837 131.609 162.988 1.00 63.77 O
ATOM 9 C3' C A2543 61.362 132.913 161.832 1.00 63.28 C
ATOM 10 O3' C A2543 60.187 132.964 161.039 1.00 65.61 O
ATOM 11 C2' C A2543 61.082 133.169 163.308 1.00 63.14 C
ATOM 12 O2' C A2543 59.904 132.532 163.745 1.00 64.03 O
ATOM 13 C1' C A2543 62.260 132.445 163.973 1.00 63.17 C
ATOM 14 N1 C A2543 63.278 133.356 164.530 1.00 62.68 N
ATOM 15 C2 C A2543 62.909 134.149 165.613 1.00 63.24 C
ATOM 16 O2 C A2543 61.773 133.997 166.105 1.00 63.23 O
ATOM 17 N3 C A2543 63.786 135.049 166.106 1.00 62.44 N
ATOM 18 C4 C A2543 64.999 135.158 165.575 1.00 62.01 C
ATOM 19 N4 C A2543 65.810 136.085 166.092 1.00 61.08 N
ATOM 20 C5 C A2543 65.425 134.328 164.492 1.00 61.86 C
ATOM 21 C6 C A2543 64.538 133.449 164.004 1.00 61.82 C
ATOM 22 P U A2544 59.954 134.195 160.034 1.00 67.57 P
ATOM 23 OP1 U A2544 58.579 133.996 159.492 1.00 67.05 O
ATOM 24 OP2 U A2544 61.115 134.299 159.103 1.00 66.52 O
ATOM 25 O5' U A2544 59.954 135.478 160.977 1.00 66.52 O
TER
ATOM 1 O3' A B2528 72.218 142.647 167.884 1.00 65.68 O
ATOM 2 P U B2529 72.957 141.340 168.456 1.00 66.64 P
ATOM 3 OP1 U B2529 73.314 141.600 169.866 1.00 68.39 O
ATOM 4 OP2 U B2529 74.021 140.965 167.490 1.00 65.68 O
ATOM 5 O5' U B2529 71.819 140.223 168.427 1.00 65.78 O
ATOM 6 C5' U B2529 70.532 140.458 169.046 1.00 64.48 C
ATOM 7 C4' U B2529 69.554 139.387 168.643 1.00 64.23 C
ATOM 8 O4' U B2529 69.314 139.401 167.210 1.00 64.04 O
ATOM 9 C3' U B2529 70.059 137.984 168.878 1.00 65.29 C
ATOM 10 O3' U B2529 69.978 137.651 170.244 1.00 66.90 O
ATOM 11 C2' U B2529 69.146 137.158 167.982 1.00 64.28 C
ATOM 12 O2' U B2529 67.855 136.981 168.535 1.00 62.78 O
ATOM 13 C1' U B2529 69.046 138.072 166.759 1.00 62.55 C
ATOM 14 N1 U B2529 70.009 137.728 165.700 1.00 59.25 N
ATOM 15 C2 U B2529 69.626 136.824 164.717 1.00 57.45 C
ATOM 16 O2 U B2529 68.558 136.230 164.723 1.00 53.99 O
ATOM 17 N3 U B2529 70.558 136.630 163.730 1.00 57.64 N
ATOM 18 C4 U B2529 71.811 137.205 163.636 1.00 58.39 C
ATOM 19 O4 U B2529 72.534 136.941 162.674 1.00 59.13 O
ATOM 20 C5 U B2529 72.141 138.078 164.706 1.00 58.80 C
ATOM 21 C6 U B2529 71.255 138.305 165.674 1.00 58.89 C
ATOM 22 P A B2530 71.071 136.672 170.879 1.00 66.92 P
ATOM 23 OP1 A B2530 71.050 135.414 170.107 1.00 66.12 O
ATOM 24 OP2 A B2530 70.803 136.647 172.329 1.00 67.50 O
ATOM 25 O5' A B2530 72.469 137.379 170.609 1.00 68.26 O
TER
ATOM 2 P C A2543 64.788 131.819 159.346 1.00 63.84 P
ATOM 3 OP1 C A2543 64.117 131.398 158.082 1.00 62.27 O
ATOM 4 OP2 C A2543 65.712 132.973 159.340 1.00 63.85 O
ATOM 5 O5' C A2543 63.644 132.087 160.402 1.00 62.13 O
ATOM 6 C5' C A2543 62.666 131.101 160.670 1.00 61.74 C
ATOM 7 C4' C A2543 61.906 131.500 161.884 1.00 62.88 C
ATOM 8 O4' C A2543 62.837 131.609 162.988 1.00 63.77 O
ATOM 9 C3' C A2543 61.362 132.913 161.832 1.00 63.28 C
ATOM 10 O3' C A2543 60.187 132.964 161.039 1.00 65.61 O
ATOM 11 C2' C A2543 61.082 133.169 163.308 1.00 63.14 C
ATOM 12 O2' C A2543 59.904 132.532 163.745 1.00 64.03 O
ATOM 13 C1' C A2543 62.260 132.445 163.973 1.00 63.17 C
ATOM 14 N1 C A2543 63.278 133.356 164.530 1.00 62.68 N
ATOM 15 C2 C A2543 62.909 134.149 165.613 1.00 63.24 C
ATOM 16 O2 C A2543 61.773 133.997 166.105 1.00 63.23 O
ATOM 17 N3 C A2543 63.786 135.049 166.106 1.00 62.44 N
ATOM 18 C4 C A2543 64.999 135.158 165.575 1.00 62.01 C
ATOM 19 N4 C A2543 65.810 136.085 166.092 1.00 61.08 N
ATOM 20 C5 C A2543 65.425 134.328 164.492 1.00 61.86 C
ATOM 21 C6 C A2543 64.538 133.449 164.004 1.00 61.82 C
ATOM 22 P U A2544 59.954 134.195 160.034 1.00 67.57 P
ATOM 23 OP1 U A2544 58.579 133.996 159.492 1.00 67.05 O
ATOM 24 OP2 U A2544 61.115 134.299 159.103 1.00 66.52 O
ATOM 25 O5' U A2544 59.954 135.478 160.977 1.00 66.52 O
TER
ATOM 1 O3' A B2528 72.218 142.647 167.884 1.00 65.68 O
ATOM 2 P U B2529 72.957 141.340 168.456 1.00 66.64 P
ATOM 3 OP1 U B2529 73.314 141.600 169.866 1.00 68.39 O
ATOM 4 OP2 U B2529 74.021 140.965 167.490 1.00 65.68 O
ATOM 5 O5' U B2529 71.819 140.223 168.427 1.00 65.78 O
ATOM 6 C5' U B2529 70.532 140.458 169.046 1.00 64.48 C
ATOM 7 C4' U B2529 69.554 139.387 168.643 1.00 64.23 C
ATOM 8 O4' U B2529 69.314 139.401 167.210 1.00 64.04 O
ATOM 9 C3' U B2529 70.059 137.984 168.878 1.00 65.29 C
ATOM 10 O3' U B2529 69.978 137.651 170.244 1.00 66.90 O
ATOM 11 C2' U B2529 69.146 137.158 167.982 1.00 64.28 C
ATOM 12 O2' U B2529 67.855 136.981 168.535 1.00 62.78 O
ATOM 13 C1' U B2529 69.046 138.072 166.759 1.00 62.55 C
ATOM 14 N1 U B2529 70.009 137.728 165.700 1.00 59.25 N
ATOM 15 C2 U B2529 69.626 136.824 164.717 1.00 57.45 C
ATOM 16 O2 U B2529 68.558 136.230 164.723 1.00 53.99 O
ATOM 17 N3 U B2529 70.558 136.630 163.730 1.00 57.64 N
ATOM 18 C4 U B2529 71.811 137.205 163.636 1.00 58.39 C
ATOM 19 O4 U B2529 72.534 136.941 162.674 1.00 59.13 O
ATOM 20 C5 U B2529 72.141 138.078 164.706 1.00 58.80 C
ATOM 21 C6 U B2529 71.255 138.305 165.674 1.00 58.89 C
ATOM 22 P A B2530 71.071 136.672 170.879 1.00 66.92 P
ATOM 23 OP1 A B2530 71.050 135.414 170.107 1.00 66.12 O
ATOM 24 OP2 A B2530 70.803 136.647 172.329 1.00 67.50 O
ATOM 25 O5' A B2530 72.469 137.379 170.609 1.00 68.26 O
TER
Atoms:
C2: (62.909,134.149,165.613)
OP1: (64.117,131.398,158.082)
OP2: (65.712,132.973,159.340)
C4: (64.999,135.158,165.575)
O5': (63.644,132.087,160.402)
C3': (61.362,132.913,161.832)
C1': (62.260,132.445,163.973)
O4': (62.837,131.609,162.988)
C5': (62.666,131.101,160.670)
P: (64.788,131.819,159.346)
O2: (61.773,133.997,166.105)
C4': (61.906,131.500,161.884)
C2': (61.082,133.169,163.308)
O2': (59.904,132.532,163.745)
N1: (63.278,133.356,164.530)
N3: (63.786,135.049,166.106)
N4: (65.810,136.085,166.092)
C6: (64.538,133.449,164.004)
C5: (65.425,134.328,164.492)
O3': (60.187,132.964,161.039)
OP1: (64.117,131.398,158.082)
OP2: (65.712,132.973,159.340)
C4: (64.999,135.158,165.575)
O5': (63.644,132.087,160.402)
C3': (61.362,132.913,161.832)
C1': (62.260,132.445,163.973)
O4': (62.837,131.609,162.988)
C5': (62.666,131.101,160.670)
P: (64.788,131.819,159.346)
O2: (61.773,133.997,166.105)
C4': (61.906,131.500,161.884)
C2': (61.082,133.169,163.308)
O2': (59.904,132.532,163.745)
N1: (63.278,133.356,164.530)
N3: (63.786,135.049,166.106)
N4: (65.810,136.085,166.092)
C6: (64.538,133.449,164.004)
C5: (65.425,134.328,164.492)
O3': (60.187,132.964,161.039)
C4: (71.811,137.205,163.636)
N3: (70.558,136.630,163.730)
OP1: (73.314,141.600,169.866)
OP2: (74.021,140.965,167.490)
C2: (69.626,136.824,164.717)
C1': (69.046,138.072,166.759)
C3': (70.059,137.984,168.878)
O5': (71.819,140.223,168.427)
O4': (69.314,139.401,167.210)
C5': (70.532,140.458,169.046)
P: (72.957,141.340,168.456)
C4': (69.554,139.387,168.643)
C2': (69.146,137.158,167.982)
O2': (67.855,136.981,168.535)
N1: (70.009,137.728,165.700)
O4: (72.534,136.941,162.674)
O2: (68.558,136.230,164.723)
C6: (71.255,138.305,165.674)
C5: (72.141,138.078,164.706)
O3': (69.978,137.651,170.244)
N3: (70.558,136.630,163.730)
OP1: (73.314,141.600,169.866)
OP2: (74.021,140.965,167.490)
C2: (69.626,136.824,164.717)
C1': (69.046,138.072,166.759)
C3': (70.059,137.984,168.878)
O5': (71.819,140.223,168.427)
O4': (69.314,139.401,167.210)
C5': (70.532,140.458,169.046)
P: (72.957,141.340,168.456)
C4': (69.554,139.387,168.643)
C2': (69.146,137.158,167.982)
O2': (67.855,136.981,168.535)
N1: (70.009,137.728,165.700)
O4: (72.534,136.941,162.674)
O2: (68.558,136.230,164.723)
C6: (71.255,138.305,165.674)
C5: (72.141,138.078,164.706)
O3': (69.978,137.651,170.244)
Image (generated by PyMOL):