Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ4:0244:0241
Extra
PDB:
ATOM 1 O3' A A 243 83.589 142.616 -8.938 1.00 93.89 O
ATOM 2 P C A 244 84.919 141.729 -8.743 1.00 94.87 P
ATOM 3 OP1 C A 244 85.160 141.009 -10.021 1.00 94.44 O
ATOM 4 OP2 C A 244 84.787 140.957 -7.484 1.00 95.55 O
ATOM 5 O5' C A 244 86.090 142.794 -8.538 1.00 94.38 O
ATOM 6 C5' C A 244 86.553 143.619 -9.628 1.00 92.47 C
ATOM 7 C4' C A 244 87.471 144.703 -9.108 1.00 91.37 C
ATOM 8 O4' C A 244 86.753 145.515 -8.141 1.00 90.99 O
ATOM 9 C3' C A 244 88.698 144.218 -8.352 1.00 91.11 C
ATOM 10 O3' C A 244 89.764 143.898 -9.237 1.00 90.13 O
ATOM 11 C2' C A 244 89.038 145.422 -7.485 1.00 91.53 C
ATOM 12 O2' C A 244 89.724 146.427 -8.200 1.00 92.27 O
ATOM 13 C1' C A 244 87.643 145.934 -7.117 1.00 91.90 C
ATOM 14 N1 C A 244 87.147 145.438 -5.814 1.00 92.95 N
ATOM 15 C2 C A 244 87.652 146.011 -4.628 1.00 92.96 C
ATOM 16 O2 C A 244 88.518 146.901 -4.701 1.00 92.26 O
ATOM 17 N3 C A 244 87.184 145.574 -3.436 1.00 92.69 N
ATOM 18 C4 C A 244 86.261 144.610 -3.391 1.00 92.56 C
ATOM 19 N4 C A 244 85.818 144.227 -2.193 1.00 92.59 N
ATOM 20 C5 C A 244 85.745 144.003 -4.573 1.00 92.81 C
ATOM 21 C6 C A 244 86.209 144.443 -5.750 1.00 93.03 C
ATOM 22 P G A 245 90.473 142.457 -9.150 1.00 90.88 P
ATOM 23 OP1 G A 245 91.572 142.452 -10.149 1.00 91.84 O
ATOM 24 OP2 G A 245 89.415 141.411 -9.214 1.00 90.63 O
ATOM 25 O5' G A 245 91.142 142.422 -7.704 1.00 89.96 O
TER
ATOM 1 O3' C B 240 81.113 140.155 4.443 1.00 73.33 O
ATOM 2 P U B 241 79.916 140.653 3.505 1.00 76.16 P
ATOM 3 OP1 U B 241 79.027 141.501 4.341 1.00 76.05 O
ATOM 4 OP2 U B 241 79.354 139.479 2.785 1.00 75.31 O
ATOM 5 O5' U B 241 80.636 141.571 2.424 1.00 77.74 O
ATOM 6 C5' U B 241 81.335 142.765 2.813 1.00 79.41 C
ATOM 7 C4' U B 241 81.997 143.392 1.609 1.00 81.20 C
ATOM 8 O4' U B 241 83.057 142.528 1.122 1.00 80.21 O
ATOM 9 C3' U B 241 81.102 143.572 0.396 1.00 82.85 C
ATOM 10 O3' U B 241 80.255 144.708 0.497 1.00 85.48 O
ATOM 11 C2' U B 241 82.116 143.682 -0.730 1.00 82.63 C
ATOM 12 O2' U B 241 82.731 144.952 -0.794 1.00 84.32 O
ATOM 13 C1' U B 241 83.152 142.646 -0.291 1.00 81.87 C
ATOM 14 N1 U B 241 82.919 141.326 -0.900 1.00 81.67 N
ATOM 15 C2 U B 241 83.632 141.008 -2.046 1.00 81.26 C
ATOM 16 O2 U B 241 84.442 141.762 -2.559 1.00 80.92 O
ATOM 17 N3 U B 241 83.361 139.771 -2.571 1.00 81.57 N
ATOM 18 C4 U B 241 82.471 138.840 -2.087 1.00 81.36 C
ATOM 19 O4 U B 241 82.334 137.765 -2.679 1.00 81.55 O
ATOM 20 C5 U B 241 81.776 139.241 -0.903 1.00 81.56 C
ATOM 21 C6 U B 241 82.018 140.437 -0.363 1.00 81.04 C
ATOM 22 P C B 242 78.710 144.577 0.077 1.00 88.14 P
ATOM 23 OP1 C B 242 78.129 145.939 0.050 1.00 88.62 O
ATOM 24 OP2 C B 242 78.091 143.529 0.932 1.00 88.46 O
ATOM 25 O5' C B 242 78.768 144.024 -1.415 1.00 89.00 O
TER
ATOM 2 P C A 244 84.919 141.729 -8.743 1.00 94.87 P
ATOM 3 OP1 C A 244 85.160 141.009 -10.021 1.00 94.44 O
ATOM 4 OP2 C A 244 84.787 140.957 -7.484 1.00 95.55 O
ATOM 5 O5' C A 244 86.090 142.794 -8.538 1.00 94.38 O
ATOM 6 C5' C A 244 86.553 143.619 -9.628 1.00 92.47 C
ATOM 7 C4' C A 244 87.471 144.703 -9.108 1.00 91.37 C
ATOM 8 O4' C A 244 86.753 145.515 -8.141 1.00 90.99 O
ATOM 9 C3' C A 244 88.698 144.218 -8.352 1.00 91.11 C
ATOM 10 O3' C A 244 89.764 143.898 -9.237 1.00 90.13 O
ATOM 11 C2' C A 244 89.038 145.422 -7.485 1.00 91.53 C
ATOM 12 O2' C A 244 89.724 146.427 -8.200 1.00 92.27 O
ATOM 13 C1' C A 244 87.643 145.934 -7.117 1.00 91.90 C
ATOM 14 N1 C A 244 87.147 145.438 -5.814 1.00 92.95 N
ATOM 15 C2 C A 244 87.652 146.011 -4.628 1.00 92.96 C
ATOM 16 O2 C A 244 88.518 146.901 -4.701 1.00 92.26 O
ATOM 17 N3 C A 244 87.184 145.574 -3.436 1.00 92.69 N
ATOM 18 C4 C A 244 86.261 144.610 -3.391 1.00 92.56 C
ATOM 19 N4 C A 244 85.818 144.227 -2.193 1.00 92.59 N
ATOM 20 C5 C A 244 85.745 144.003 -4.573 1.00 92.81 C
ATOM 21 C6 C A 244 86.209 144.443 -5.750 1.00 93.03 C
ATOM 22 P G A 245 90.473 142.457 -9.150 1.00 90.88 P
ATOM 23 OP1 G A 245 91.572 142.452 -10.149 1.00 91.84 O
ATOM 24 OP2 G A 245 89.415 141.411 -9.214 1.00 90.63 O
ATOM 25 O5' G A 245 91.142 142.422 -7.704 1.00 89.96 O
TER
ATOM 1 O3' C B 240 81.113 140.155 4.443 1.00 73.33 O
ATOM 2 P U B 241 79.916 140.653 3.505 1.00 76.16 P
ATOM 3 OP1 U B 241 79.027 141.501 4.341 1.00 76.05 O
ATOM 4 OP2 U B 241 79.354 139.479 2.785 1.00 75.31 O
ATOM 5 O5' U B 241 80.636 141.571 2.424 1.00 77.74 O
ATOM 6 C5' U B 241 81.335 142.765 2.813 1.00 79.41 C
ATOM 7 C4' U B 241 81.997 143.392 1.609 1.00 81.20 C
ATOM 8 O4' U B 241 83.057 142.528 1.122 1.00 80.21 O
ATOM 9 C3' U B 241 81.102 143.572 0.396 1.00 82.85 C
ATOM 10 O3' U B 241 80.255 144.708 0.497 1.00 85.48 O
ATOM 11 C2' U B 241 82.116 143.682 -0.730 1.00 82.63 C
ATOM 12 O2' U B 241 82.731 144.952 -0.794 1.00 84.32 O
ATOM 13 C1' U B 241 83.152 142.646 -0.291 1.00 81.87 C
ATOM 14 N1 U B 241 82.919 141.326 -0.900 1.00 81.67 N
ATOM 15 C2 U B 241 83.632 141.008 -2.046 1.00 81.26 C
ATOM 16 O2 U B 241 84.442 141.762 -2.559 1.00 80.92 O
ATOM 17 N3 U B 241 83.361 139.771 -2.571 1.00 81.57 N
ATOM 18 C4 U B 241 82.471 138.840 -2.087 1.00 81.36 C
ATOM 19 O4 U B 241 82.334 137.765 -2.679 1.00 81.55 O
ATOM 20 C5 U B 241 81.776 139.241 -0.903 1.00 81.56 C
ATOM 21 C6 U B 241 82.018 140.437 -0.363 1.00 81.04 C
ATOM 22 P C B 242 78.710 144.577 0.077 1.00 88.14 P
ATOM 23 OP1 C B 242 78.129 145.939 0.050 1.00 88.62 O
ATOM 24 OP2 C B 242 78.091 143.529 0.932 1.00 88.46 O
ATOM 25 O5' C B 242 78.768 144.024 -1.415 1.00 89.00 O
TER
Atoms:
C2: (87.652,146.011,-4.628)
OP1: (85.160,141.009,-10.021)
OP2: (84.787,140.957,-7.484)
C4: (86.261,144.610,-3.391)
O5': (86.090,142.794,-8.538)
C3': (88.698,144.218,-8.352)
C1': (87.643,145.934,-7.117)
O4': (86.753,145.515,-8.141)
C5': (86.553,143.619,-9.628)
P: (84.919,141.729,-8.743)
O2: (88.518,146.901,-4.701)
C4': (87.471,144.703,-9.108)
C2': (89.038,145.422,-7.485)
O2': (89.724,146.427,-8.200)
N1: (87.147,145.438,-5.814)
N3: (87.184,145.574,-3.436)
N4: (85.818,144.227,-2.193)
C6: (86.209,144.443,-5.750)
C5: (85.745,144.003,-4.573)
O3': (89.764,143.898,-9.237)
OP1: (85.160,141.009,-10.021)
OP2: (84.787,140.957,-7.484)
C4: (86.261,144.610,-3.391)
O5': (86.090,142.794,-8.538)
C3': (88.698,144.218,-8.352)
C1': (87.643,145.934,-7.117)
O4': (86.753,145.515,-8.141)
C5': (86.553,143.619,-9.628)
P: (84.919,141.729,-8.743)
O2: (88.518,146.901,-4.701)
C4': (87.471,144.703,-9.108)
C2': (89.038,145.422,-7.485)
O2': (89.724,146.427,-8.200)
N1: (87.147,145.438,-5.814)
N3: (87.184,145.574,-3.436)
N4: (85.818,144.227,-2.193)
C6: (86.209,144.443,-5.750)
C5: (85.745,144.003,-4.573)
O3': (89.764,143.898,-9.237)
C4: (82.471,138.840,-2.087)
N3: (83.361,139.771,-2.571)
OP1: (79.027,141.501,4.341)
OP2: (79.354,139.479,2.785)
C2: (83.632,141.008,-2.046)
C1': (83.152,142.646,-0.291)
C3': (81.102,143.572,0.396)
O5': (80.636,141.571,2.424)
O4': (83.057,142.528,1.122)
C5': (81.335,142.765,2.813)
P: (79.916,140.653,3.505)
C4': (81.997,143.392,1.609)
C2': (82.116,143.682,-0.730)
O2': (82.731,144.952,-0.794)
N1: (82.919,141.326,-0.900)
O4: (82.334,137.765,-2.679)
O2: (84.442,141.762,-2.559)
C6: (82.018,140.437,-0.363)
C5: (81.776,139.241,-0.903)
O3': (80.255,144.708,0.497)
N3: (83.361,139.771,-2.571)
OP1: (79.027,141.501,4.341)
OP2: (79.354,139.479,2.785)
C2: (83.632,141.008,-2.046)
C1': (83.152,142.646,-0.291)
C3': (81.102,143.572,0.396)
O5': (80.636,141.571,2.424)
O4': (83.057,142.528,1.122)
C5': (81.335,142.765,2.813)
P: (79.916,140.653,3.505)
C4': (81.997,143.392,1.609)
C2': (82.116,143.682,-0.730)
O2': (82.731,144.952,-0.794)
N1: (82.919,141.326,-0.900)
O4: (82.334,137.765,-2.679)
O2: (84.442,141.762,-2.559)
C6: (82.018,140.437,-0.363)
C5: (81.776,139.241,-0.903)
O3': (80.255,144.708,0.497)
Image (generated by PyMOL):