ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ5:01788:01804

Extra

PDB:
ATOM 1 O3' A A1787 105.878 138.178 93.777 1.00 38.74 O
ATOM 2 P C A1788 105.056 139.023 92.691 1.00 40.71 P
ATOM 3 OP1 C A1788 103.666 139.189 93.202 1.00 37.88 O
ATOM 4 OP2 C A1788 105.293 138.439 91.354 1.00 38.11 O
ATOM 5 O5' C A1788 105.766 140.442 92.693 1.00 42.06 O
ATOM 6 C5' C A1788 105.954 141.177 93.922 1.00 40.88 C
ATOM 7 C4' C A1788 106.747 142.430 93.650 1.00 39.39 C
ATOM 8 O4' C A1788 108.006 142.079 93.007 1.00 38.09 O
ATOM 9 C3' C A1788 106.090 143.372 92.662 1.00 38.56 C
ATOM 10 O3' C A1788 105.128 144.187 93.324 1.00 40.56 O
ATOM 11 C2' C A1788 107.281 144.165 92.158 1.00 37.66 C
ATOM 12 O2' C A1788 107.708 145.109 93.100 1.00 42.82 O
ATOM 13 C1' C A1788 108.352 143.080 92.073 1.00 37.05 C
ATOM 14 N1 C A1788 108.429 142.498 90.721 1.00 37.73 N
ATOM 15 C2 C A1788 109.035 143.261 89.722 1.00 37.26 C
ATOM 16 O2 C A1788 109.549 144.337 90.034 1.00 37.69 O
ATOM 17 N3 C A1788 109.057 142.804 88.449 1.00 36.51 N
ATOM 18 C4 C A1788 108.536 141.611 88.163 1.00 36.73 C
ATOM 19 N4 C A1788 108.589 141.201 86.889 1.00 34.85 N
ATOM 20 C5 C A1788 107.943 140.785 89.169 1.00 34.74 C
ATOM 21 C6 C A1788 107.907 141.266 90.425 1.00 35.31 C
ATOM 22 P U A1789 103.649 144.333 92.720 1.00 38.89 P
ATOM 23 OP1 U A1789 102.866 145.090 93.700 1.00 37.49 O
ATOM 24 OP2 U A1789 103.182 142.996 92.317 1.00 41.83 O
ATOM 25 O5' U A1789 103.853 145.193 91.390 1.00 37.31 O
TER

ATOM 1 O3' A B1803 104.388 135.389 80.236 1.00 33.70 O
ATOM 2 P U B1804 105.858 134.778 80.265 1.00 34.60 P
ATOM 3 OP1 U B1804 106.289 134.646 78.853 1.00 37.69 O
ATOM 4 OP2 U B1804 105.882 133.593 81.153 1.00 33.52 O
ATOM 5 O5' U B1804 106.700 135.921 80.981 1.00 37.50 O
ATOM 6 C5' U B1804 106.650 137.284 80.517 1.00 39.59 C
ATOM 7 C4' U B1804 107.275 138.195 81.540 1.00 41.56 C
ATOM 8 O4' U B1804 106.435 138.241 82.716 1.00 40.72 O
ATOM 9 C3' U B1804 108.636 137.726 82.040 1.00 42.00 C
ATOM 10 O3' U B1804 109.661 138.232 81.190 1.00 41.80 O
ATOM 11 C2' U B1804 108.713 138.351 83.427 1.00 41.27 C
ATOM 12 O2' U B1804 109.083 139.708 83.347 1.00 43.96 O
ATOM 13 C1' U B1804 107.248 138.304 83.871 1.00 41.32 C
ATOM 14 N1 U B1804 106.848 137.226 84.787 1.00 40.15 N
ATOM 15 C2 U B1804 106.803 137.527 86.133 1.00 40.34 C
ATOM 16 O2 U B1804 107.167 138.594 86.581 1.00 42.33 O
ATOM 17 N3 U B1804 106.318 136.530 86.938 1.00 39.50 N
ATOM 18 C4 U B1804 105.908 135.276 86.547 1.00 40.34 C
ATOM 19 O4 U B1804 105.468 134.496 87.391 1.00 41.70 O
ATOM 20 C5 U B1804 106.041 135.015 85.145 1.00 38.35 C
ATOM 21 C6 U B1804 106.494 135.976 84.332 1.00 38.86 C
ATOM 22 P A B1805 110.542 137.229 80.304 1.00 43.56 P
ATOM 23 OP1 A B1805 110.274 137.506 78.870 1.00 40.84 O
ATOM 24 OP2 A B1805 110.387 135.851 80.835 1.00 42.23 O
ATOM 25 O5' A B1805 112.042 137.667 80.602 1.00 44.19 O
TER

Atoms:
C2: (109.035,143.261,89.722)
OP1: (103.666,139.189,93.202)
OP2: (105.293,138.439,91.354)
C4: (108.536,141.611,88.163)
O5': (105.766,140.442,92.693)
C3': (106.090,143.372,92.662)
C1': (108.352,143.080,92.073)
O4': (108.006,142.079,93.007)
C5': (105.954,141.177,93.922)
P: (105.056,139.023,92.691)
O2: (109.549,144.337,90.034)
C4': (106.747,142.430,93.650)
C2': (107.281,144.165,92.158)
O2': (107.708,145.109,93.100)
N1: (108.429,142.498,90.721)
N3: (109.057,142.804,88.449)
N4: (108.589,141.201,86.889)
C6: (107.907,141.266,90.425)
C5: (107.943,140.785,89.169)
O3': (105.128,144.187,93.324)
C4: (105.908,135.276,86.547)
N3: (106.318,136.530,86.938)
OP1: (106.289,134.646,78.853)
OP2: (105.882,133.593,81.153)
C2: (106.803,137.527,86.133)
C1': (107.248,138.304,83.871)
C3': (108.636,137.726,82.040)
O5': (106.700,135.921,80.981)
O4': (106.435,138.241,82.716)
C5': (106.650,137.284,80.517)
P: (105.858,134.778,80.265)
C4': (107.275,138.195,81.540)
C2': (108.713,138.351,83.427)
O2': (109.083,139.708,83.347)
N1: (106.848,137.226,84.787)
O4: (105.468,134.496,87.391)
O2: (107.167,138.594,86.581)
C6: (106.494,135.976,84.332)
C5: (106.041,135.015,85.145)
O3': (109.661,138.232,81.190)
Image (generated by PyMOL):
PyMOL image
show in jmol