Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:0244:0241
Extra
PDB:
ATOM 1 O3' A A 243 83.221 142.185 -9.185 1.00 92.09 O
ATOM 2 P C A 244 84.633 141.415 -9.109 1.00 93.76 P
ATOM 3 OP1 C A 244 84.883 140.841 -10.456 1.00 93.86 O
ATOM 4 OP2 C A 244 84.635 140.519 -7.923 1.00 94.95 O
ATOM 5 O5' C A 244 85.707 142.567 -8.854 1.00 93.51 O
ATOM 6 C5' C A 244 86.181 143.400 -9.930 1.00 91.51 C
ATOM 7 C4' C A 244 87.106 144.467 -9.394 1.00 90.86 C
ATOM 8 O4' C A 244 86.395 145.261 -8.408 1.00 91.40 O
ATOM 9 C3' C A 244 88.335 143.974 -8.648 1.00 90.14 C
ATOM 10 O3' C A 244 89.397 143.655 -9.534 1.00 88.23 O
ATOM 11 C2' C A 244 88.689 145.176 -7.785 1.00 91.11 C
ATOM 12 O2' C A 244 89.371 146.182 -8.505 1.00 90.96 O
ATOM 13 C1' C A 244 87.301 145.693 -7.404 1.00 92.25 C
ATOM 14 N1 C A 244 86.832 145.217 -6.086 1.00 94.17 N
ATOM 15 C2 C A 244 87.295 145.870 -4.930 1.00 95.16 C
ATOM 16 O2 C A 244 88.097 146.813 -5.047 1.00 95.37 O
ATOM 17 N3 C A 244 86.860 145.456 -3.718 1.00 95.81 N
ATOM 18 C4 C A 244 86.006 144.435 -3.628 1.00 95.65 C
ATOM 19 N4 C A 244 85.597 144.072 -2.408 1.00 96.20 N
ATOM 20 C5 C A 244 85.531 143.743 -4.781 1.00 95.20 C
ATOM 21 C6 C A 244 85.964 144.164 -5.978 1.00 94.84 C
ATOM 22 P G A 245 90.237 142.302 -9.325 1.00 87.94 P
ATOM 23 OP1 G A 245 91.427 142.394 -10.207 1.00 89.18 O
ATOM 24 OP2 G A 245 89.304 141.157 -9.466 1.00 88.62 O
ATOM 25 O5' G A 245 90.744 142.359 -7.814 1.00 86.48 O
TER
ATOM 1 O3' C B 240 80.843 139.906 4.225 1.00 69.41 O
ATOM 2 P U B 241 79.614 140.448 3.352 1.00 72.40 P
ATOM 3 OP1 U B 241 78.810 141.320 4.245 1.00 72.28 O
ATOM 4 OP2 U B 241 78.967 139.299 2.664 1.00 71.74 O
ATOM 5 O5' U B 241 80.306 141.357 2.243 1.00 74.57 O
ATOM 6 C5' U B 241 80.987 142.573 2.606 1.00 77.80 C
ATOM 7 C4' U B 241 81.592 143.219 1.384 1.00 79.56 C
ATOM 8 O4' U B 241 82.669 142.392 0.873 1.00 79.21 O
ATOM 9 C3' U B 241 80.656 143.373 0.198 1.00 81.40 C
ATOM 10 O3' U B 241 79.787 144.497 0.327 1.00 83.03 O
ATOM 11 C2' U B 241 81.634 143.497 -0.963 1.00 81.76 C
ATOM 12 O2' U B 241 82.202 144.789 -1.073 1.00 83.02 O
ATOM 13 C1' U B 241 82.720 142.503 -0.541 1.00 81.19 C
ATOM 14 N1 U B 241 82.551 141.163 -1.129 1.00 81.42 N
ATOM 15 C2 U B 241 83.398 140.803 -2.165 1.00 81.55 C
ATOM 16 O2 U B 241 84.281 141.528 -2.586 1.00 82.27 O
ATOM 17 N3 U B 241 83.172 139.557 -2.692 1.00 81.71 N
ATOM 18 C4 U B 241 82.209 138.655 -2.304 1.00 81.21 C
ATOM 19 O4 U B 241 82.119 137.577 -2.894 1.00 82.50 O
ATOM 20 C5 U B 241 81.388 139.090 -1.219 1.00 81.05 C
ATOM 21 C6 U B 241 81.581 140.296 -0.681 1.00 80.83 C
ATOM 22 P C B 242 78.253 144.369 -0.139 1.00 84.86 P
ATOM 23 OP1 C B 242 77.697 145.743 -0.242 1.00 83.78 O
ATOM 24 OP2 C B 242 77.590 143.373 0.749 1.00 84.27 O
ATOM 25 O5' C B 242 78.359 143.750 -1.606 1.00 84.93 O
TER
ATOM 2 P C A 244 84.633 141.415 -9.109 1.00 93.76 P
ATOM 3 OP1 C A 244 84.883 140.841 -10.456 1.00 93.86 O
ATOM 4 OP2 C A 244 84.635 140.519 -7.923 1.00 94.95 O
ATOM 5 O5' C A 244 85.707 142.567 -8.854 1.00 93.51 O
ATOM 6 C5' C A 244 86.181 143.400 -9.930 1.00 91.51 C
ATOM 7 C4' C A 244 87.106 144.467 -9.394 1.00 90.86 C
ATOM 8 O4' C A 244 86.395 145.261 -8.408 1.00 91.40 O
ATOM 9 C3' C A 244 88.335 143.974 -8.648 1.00 90.14 C
ATOM 10 O3' C A 244 89.397 143.655 -9.534 1.00 88.23 O
ATOM 11 C2' C A 244 88.689 145.176 -7.785 1.00 91.11 C
ATOM 12 O2' C A 244 89.371 146.182 -8.505 1.00 90.96 O
ATOM 13 C1' C A 244 87.301 145.693 -7.404 1.00 92.25 C
ATOM 14 N1 C A 244 86.832 145.217 -6.086 1.00 94.17 N
ATOM 15 C2 C A 244 87.295 145.870 -4.930 1.00 95.16 C
ATOM 16 O2 C A 244 88.097 146.813 -5.047 1.00 95.37 O
ATOM 17 N3 C A 244 86.860 145.456 -3.718 1.00 95.81 N
ATOM 18 C4 C A 244 86.006 144.435 -3.628 1.00 95.65 C
ATOM 19 N4 C A 244 85.597 144.072 -2.408 1.00 96.20 N
ATOM 20 C5 C A 244 85.531 143.743 -4.781 1.00 95.20 C
ATOM 21 C6 C A 244 85.964 144.164 -5.978 1.00 94.84 C
ATOM 22 P G A 245 90.237 142.302 -9.325 1.00 87.94 P
ATOM 23 OP1 G A 245 91.427 142.394 -10.207 1.00 89.18 O
ATOM 24 OP2 G A 245 89.304 141.157 -9.466 1.00 88.62 O
ATOM 25 O5' G A 245 90.744 142.359 -7.814 1.00 86.48 O
TER
ATOM 1 O3' C B 240 80.843 139.906 4.225 1.00 69.41 O
ATOM 2 P U B 241 79.614 140.448 3.352 1.00 72.40 P
ATOM 3 OP1 U B 241 78.810 141.320 4.245 1.00 72.28 O
ATOM 4 OP2 U B 241 78.967 139.299 2.664 1.00 71.74 O
ATOM 5 O5' U B 241 80.306 141.357 2.243 1.00 74.57 O
ATOM 6 C5' U B 241 80.987 142.573 2.606 1.00 77.80 C
ATOM 7 C4' U B 241 81.592 143.219 1.384 1.00 79.56 C
ATOM 8 O4' U B 241 82.669 142.392 0.873 1.00 79.21 O
ATOM 9 C3' U B 241 80.656 143.373 0.198 1.00 81.40 C
ATOM 10 O3' U B 241 79.787 144.497 0.327 1.00 83.03 O
ATOM 11 C2' U B 241 81.634 143.497 -0.963 1.00 81.76 C
ATOM 12 O2' U B 241 82.202 144.789 -1.073 1.00 83.02 O
ATOM 13 C1' U B 241 82.720 142.503 -0.541 1.00 81.19 C
ATOM 14 N1 U B 241 82.551 141.163 -1.129 1.00 81.42 N
ATOM 15 C2 U B 241 83.398 140.803 -2.165 1.00 81.55 C
ATOM 16 O2 U B 241 84.281 141.528 -2.586 1.00 82.27 O
ATOM 17 N3 U B 241 83.172 139.557 -2.692 1.00 81.71 N
ATOM 18 C4 U B 241 82.209 138.655 -2.304 1.00 81.21 C
ATOM 19 O4 U B 241 82.119 137.577 -2.894 1.00 82.50 O
ATOM 20 C5 U B 241 81.388 139.090 -1.219 1.00 81.05 C
ATOM 21 C6 U B 241 81.581 140.296 -0.681 1.00 80.83 C
ATOM 22 P C B 242 78.253 144.369 -0.139 1.00 84.86 P
ATOM 23 OP1 C B 242 77.697 145.743 -0.242 1.00 83.78 O
ATOM 24 OP2 C B 242 77.590 143.373 0.749 1.00 84.27 O
ATOM 25 O5' C B 242 78.359 143.750 -1.606 1.00 84.93 O
TER
Atoms:
C2: (87.295,145.870,-4.930)
OP1: (84.883,140.841,-10.456)
OP2: (84.635,140.519,-7.923)
C4: (86.006,144.435,-3.628)
O5': (85.707,142.567,-8.854)
C3': (88.335,143.974,-8.648)
C1': (87.301,145.693,-7.404)
O4': (86.395,145.261,-8.408)
C5': (86.181,143.400,-9.930)
P: (84.633,141.415,-9.109)
O2: (88.097,146.813,-5.047)
C4': (87.106,144.467,-9.394)
C2': (88.689,145.176,-7.785)
O2': (89.371,146.182,-8.505)
N1: (86.832,145.217,-6.086)
N3: (86.860,145.456,-3.718)
N4: (85.597,144.072,-2.408)
C6: (85.964,144.164,-5.978)
C5: (85.531,143.743,-4.781)
O3': (89.397,143.655,-9.534)
OP1: (84.883,140.841,-10.456)
OP2: (84.635,140.519,-7.923)
C4: (86.006,144.435,-3.628)
O5': (85.707,142.567,-8.854)
C3': (88.335,143.974,-8.648)
C1': (87.301,145.693,-7.404)
O4': (86.395,145.261,-8.408)
C5': (86.181,143.400,-9.930)
P: (84.633,141.415,-9.109)
O2: (88.097,146.813,-5.047)
C4': (87.106,144.467,-9.394)
C2': (88.689,145.176,-7.785)
O2': (89.371,146.182,-8.505)
N1: (86.832,145.217,-6.086)
N3: (86.860,145.456,-3.718)
N4: (85.597,144.072,-2.408)
C6: (85.964,144.164,-5.978)
C5: (85.531,143.743,-4.781)
O3': (89.397,143.655,-9.534)
C4: (82.209,138.655,-2.304)
N3: (83.172,139.557,-2.692)
OP1: (78.810,141.320,4.245)
OP2: (78.967,139.299,2.664)
C2: (83.398,140.803,-2.165)
C1': (82.720,142.503,-0.541)
C3': (80.656,143.373,0.198)
O5': (80.306,141.357,2.243)
O4': (82.669,142.392,0.873)
C5': (80.987,142.573,2.606)
P: (79.614,140.448,3.352)
C4': (81.592,143.219,1.384)
C2': (81.634,143.497,-0.963)
O2': (82.202,144.789,-1.073)
N1: (82.551,141.163,-1.129)
O4: (82.119,137.577,-2.894)
O2: (84.281,141.528,-2.586)
C6: (81.581,140.296,-0.681)
C5: (81.388,139.090,-1.219)
O3': (79.787,144.497,0.327)
N3: (83.172,139.557,-2.692)
OP1: (78.810,141.320,4.245)
OP2: (78.967,139.299,2.664)
C2: (83.398,140.803,-2.165)
C1': (82.720,142.503,-0.541)
C3': (80.656,143.373,0.198)
O5': (80.306,141.357,2.243)
O4': (82.669,142.392,0.873)
C5': (80.987,142.573,2.606)
P: (79.614,140.448,3.352)
C4': (81.592,143.219,1.384)
C2': (81.634,143.497,-0.963)
O2': (82.202,144.789,-1.073)
N1: (82.551,141.163,-1.129)
O4: (82.119,137.577,-2.894)
O2: (84.281,141.528,-2.586)
C6: (81.581,140.296,-0.681)
C5: (81.388,139.090,-1.219)
O3': (79.787,144.497,0.327)
Image (generated by PyMOL):