Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ8:0244:0241
Extra
PDB:
ATOM 1 O3' A A 243 82.924 141.145 -9.528 1.00 73.62 O
ATOM 2 P C A 244 84.346 140.400 -9.423 1.00 75.77 P
ATOM 3 OP1 C A 244 84.602 139.738 -10.735 1.00 74.40 O
ATOM 4 OP2 C A 244 84.348 139.584 -8.173 1.00 76.09 O
ATOM 5 O5' C A 244 85.401 141.582 -9.224 1.00 74.27 O
ATOM 6 C5' C A 244 85.930 142.313 -10.346 1.00 71.27 C
ATOM 7 C4' C A 244 86.914 143.356 -9.868 1.00 70.67 C
ATOM 8 O4' C A 244 86.248 144.223 -8.907 1.00 70.41 O
ATOM 9 C3' C A 244 88.131 142.842 -9.110 1.00 70.39 C
ATOM 10 O3' C A 244 89.175 142.409 -9.980 1.00 69.81 O
ATOM 11 C2' C A 244 88.542 144.065 -8.299 1.00 70.63 C
ATOM 12 O2' C A 244 89.260 145.026 -9.049 1.00 70.06 O
ATOM 13 C1' C A 244 87.177 144.643 -7.918 1.00 70.75 C
ATOM 14 N1 C A 244 86.704 144.191 -6.591 1.00 71.09 N
ATOM 15 C2 C A 244 87.123 144.897 -5.446 1.00 71.44 C
ATOM 16 O2 C A 244 87.889 145.872 -5.578 1.00 71.67 O
ATOM 17 N3 C A 244 86.687 144.496 -4.228 1.00 71.16 N
ATOM 18 C4 C A 244 85.873 143.442 -4.123 1.00 70.19 C
ATOM 19 N4 C A 244 85.459 143.095 -2.900 1.00 68.63 N
ATOM 20 C5 C A 244 85.443 142.703 -5.265 1.00 70.10 C
ATOM 21 C6 C A 244 85.876 143.108 -6.467 1.00 70.43 C
ATOM 22 P G A 245 89.889 140.986 -9.729 1.00 71.57 P
ATOM 23 OP1 G A 245 91.064 140.891 -10.635 1.00 71.91 O
ATOM 24 OP2 G A 245 88.835 139.936 -9.783 1.00 72.07 O
ATOM 25 O5' G A 245 90.442 141.062 -8.234 1.00 70.89 O
TER
ATOM 1 O3' C B 240 80.374 138.688 3.725 1.00 56.77 O
ATOM 2 P U B 241 79.224 139.287 2.770 1.00 58.43 P
ATOM 3 OP1 U B 241 78.382 140.186 3.609 1.00 58.34 O
ATOM 4 OP2 U B 241 78.584 138.174 2.021 1.00 57.38 O
ATOM 5 O5' U B 241 80.030 140.165 1.709 1.00 60.36 O
ATOM 6 C5' U B 241 80.708 141.378 2.100 1.00 63.26 C
ATOM 7 C4' U B 241 81.332 142.045 0.893 1.00 65.82 C
ATOM 8 O4' U B 241 82.413 141.220 0.376 1.00 67.21 O
ATOM 9 C3' U B 241 80.421 142.228 -0.311 1.00 68.33 C
ATOM 10 O3' U B 241 79.542 143.345 -0.184 1.00 70.30 O
ATOM 11 C2' U B 241 81.423 142.391 -1.448 1.00 68.38 C
ATOM 12 O2' U B 241 81.980 143.691 -1.506 1.00 68.21 O
ATOM 13 C1' U B 241 82.508 141.390 -1.034 1.00 67.83 C
ATOM 14 N1 U B 241 82.379 140.078 -1.694 1.00 66.65 N
ATOM 15 C2 U B 241 83.178 139.831 -2.804 1.00 66.68 C
ATOM 16 O2 U B 241 83.987 140.635 -3.237 1.00 67.16 O
ATOM 17 N3 U B 241 82.993 138.601 -3.391 1.00 65.78 N
ATOM 18 C4 U B 241 82.113 137.615 -3.000 1.00 64.08 C
ATOM 19 O4 U B 241 82.017 136.588 -3.674 1.00 62.18 O
ATOM 20 C5 U B 241 81.337 137.936 -1.844 1.00 64.46 C
ATOM 21 C6 U B 241 81.492 139.124 -1.244 1.00 66.41 C
ATOM 22 P C B 242 77.999 143.188 -0.617 1.00 72.52 P
ATOM 23 OP1 C B 242 77.413 144.546 -0.779 1.00 72.50 O
ATOM 24 OP2 C B 242 77.368 142.227 0.326 1.00 71.89 O
ATOM 25 O5' C B 242 78.079 142.499 -2.052 1.00 71.12 O
TER
ATOM 2 P C A 244 84.346 140.400 -9.423 1.00 75.77 P
ATOM 3 OP1 C A 244 84.602 139.738 -10.735 1.00 74.40 O
ATOM 4 OP2 C A 244 84.348 139.584 -8.173 1.00 76.09 O
ATOM 5 O5' C A 244 85.401 141.582 -9.224 1.00 74.27 O
ATOM 6 C5' C A 244 85.930 142.313 -10.346 1.00 71.27 C
ATOM 7 C4' C A 244 86.914 143.356 -9.868 1.00 70.67 C
ATOM 8 O4' C A 244 86.248 144.223 -8.907 1.00 70.41 O
ATOM 9 C3' C A 244 88.131 142.842 -9.110 1.00 70.39 C
ATOM 10 O3' C A 244 89.175 142.409 -9.980 1.00 69.81 O
ATOM 11 C2' C A 244 88.542 144.065 -8.299 1.00 70.63 C
ATOM 12 O2' C A 244 89.260 145.026 -9.049 1.00 70.06 O
ATOM 13 C1' C A 244 87.177 144.643 -7.918 1.00 70.75 C
ATOM 14 N1 C A 244 86.704 144.191 -6.591 1.00 71.09 N
ATOM 15 C2 C A 244 87.123 144.897 -5.446 1.00 71.44 C
ATOM 16 O2 C A 244 87.889 145.872 -5.578 1.00 71.67 O
ATOM 17 N3 C A 244 86.687 144.496 -4.228 1.00 71.16 N
ATOM 18 C4 C A 244 85.873 143.442 -4.123 1.00 70.19 C
ATOM 19 N4 C A 244 85.459 143.095 -2.900 1.00 68.63 N
ATOM 20 C5 C A 244 85.443 142.703 -5.265 1.00 70.10 C
ATOM 21 C6 C A 244 85.876 143.108 -6.467 1.00 70.43 C
ATOM 22 P G A 245 89.889 140.986 -9.729 1.00 71.57 P
ATOM 23 OP1 G A 245 91.064 140.891 -10.635 1.00 71.91 O
ATOM 24 OP2 G A 245 88.835 139.936 -9.783 1.00 72.07 O
ATOM 25 O5' G A 245 90.442 141.062 -8.234 1.00 70.89 O
TER
ATOM 1 O3' C B 240 80.374 138.688 3.725 1.00 56.77 O
ATOM 2 P U B 241 79.224 139.287 2.770 1.00 58.43 P
ATOM 3 OP1 U B 241 78.382 140.186 3.609 1.00 58.34 O
ATOM 4 OP2 U B 241 78.584 138.174 2.021 1.00 57.38 O
ATOM 5 O5' U B 241 80.030 140.165 1.709 1.00 60.36 O
ATOM 6 C5' U B 241 80.708 141.378 2.100 1.00 63.26 C
ATOM 7 C4' U B 241 81.332 142.045 0.893 1.00 65.82 C
ATOM 8 O4' U B 241 82.413 141.220 0.376 1.00 67.21 O
ATOM 9 C3' U B 241 80.421 142.228 -0.311 1.00 68.33 C
ATOM 10 O3' U B 241 79.542 143.345 -0.184 1.00 70.30 O
ATOM 11 C2' U B 241 81.423 142.391 -1.448 1.00 68.38 C
ATOM 12 O2' U B 241 81.980 143.691 -1.506 1.00 68.21 O
ATOM 13 C1' U B 241 82.508 141.390 -1.034 1.00 67.83 C
ATOM 14 N1 U B 241 82.379 140.078 -1.694 1.00 66.65 N
ATOM 15 C2 U B 241 83.178 139.831 -2.804 1.00 66.68 C
ATOM 16 O2 U B 241 83.987 140.635 -3.237 1.00 67.16 O
ATOM 17 N3 U B 241 82.993 138.601 -3.391 1.00 65.78 N
ATOM 18 C4 U B 241 82.113 137.615 -3.000 1.00 64.08 C
ATOM 19 O4 U B 241 82.017 136.588 -3.674 1.00 62.18 O
ATOM 20 C5 U B 241 81.337 137.936 -1.844 1.00 64.46 C
ATOM 21 C6 U B 241 81.492 139.124 -1.244 1.00 66.41 C
ATOM 22 P C B 242 77.999 143.188 -0.617 1.00 72.52 P
ATOM 23 OP1 C B 242 77.413 144.546 -0.779 1.00 72.50 O
ATOM 24 OP2 C B 242 77.368 142.227 0.326 1.00 71.89 O
ATOM 25 O5' C B 242 78.079 142.499 -2.052 1.00 71.12 O
TER
Atoms:
C2: (87.123,144.897,-5.446)
OP1: (84.602,139.738,-10.735)
OP2: (84.348,139.584,-8.173)
C4: (85.873,143.442,-4.123)
O5': (85.401,141.582,-9.224)
C3': (88.131,142.842,-9.110)
C1': (87.177,144.643,-7.918)
O4': (86.248,144.223,-8.907)
C5': (85.930,142.313,-10.346)
P: (84.346,140.400,-9.423)
O2: (87.889,145.872,-5.578)
C4': (86.914,143.356,-9.868)
C2': (88.542,144.065,-8.299)
O2': (89.260,145.026,-9.049)
N1: (86.704,144.191,-6.591)
N3: (86.687,144.496,-4.228)
N4: (85.459,143.095,-2.900)
C6: (85.876,143.108,-6.467)
C5: (85.443,142.703,-5.265)
O3': (89.175,142.409,-9.980)
OP1: (84.602,139.738,-10.735)
OP2: (84.348,139.584,-8.173)
C4: (85.873,143.442,-4.123)
O5': (85.401,141.582,-9.224)
C3': (88.131,142.842,-9.110)
C1': (87.177,144.643,-7.918)
O4': (86.248,144.223,-8.907)
C5': (85.930,142.313,-10.346)
P: (84.346,140.400,-9.423)
O2: (87.889,145.872,-5.578)
C4': (86.914,143.356,-9.868)
C2': (88.542,144.065,-8.299)
O2': (89.260,145.026,-9.049)
N1: (86.704,144.191,-6.591)
N3: (86.687,144.496,-4.228)
N4: (85.459,143.095,-2.900)
C6: (85.876,143.108,-6.467)
C5: (85.443,142.703,-5.265)
O3': (89.175,142.409,-9.980)
C4: (82.113,137.615,-3.000)
N3: (82.993,138.601,-3.391)
OP1: (78.382,140.186,3.609)
OP2: (78.584,138.174,2.021)
C2: (83.178,139.831,-2.804)
C1': (82.508,141.390,-1.034)
C3': (80.421,142.228,-0.311)
O5': (80.030,140.165,1.709)
O4': (82.413,141.220,0.376)
C5': (80.708,141.378,2.100)
P: (79.224,139.287,2.770)
C4': (81.332,142.045,0.893)
C2': (81.423,142.391,-1.448)
O2': (81.980,143.691,-1.506)
N1: (82.379,140.078,-1.694)
O4: (82.017,136.588,-3.674)
O2: (83.987,140.635,-3.237)
C6: (81.492,139.124,-1.244)
C5: (81.337,137.936,-1.844)
O3': (79.542,143.345,-0.184)
N3: (82.993,138.601,-3.391)
OP1: (78.382,140.186,3.609)
OP2: (78.584,138.174,2.021)
C2: (83.178,139.831,-2.804)
C1': (82.508,141.390,-1.034)
C3': (80.421,142.228,-0.311)
O5': (80.030,140.165,1.709)
O4': (82.413,141.220,0.376)
C5': (80.708,141.378,2.100)
P: (79.224,139.287,2.770)
C4': (81.332,142.045,0.893)
C2': (81.423,142.391,-1.448)
O2': (81.980,143.691,-1.506)
N1: (82.379,140.078,-1.694)
O4: (82.017,136.588,-3.674)
O2: (83.987,140.635,-3.237)
C6: (81.492,139.124,-1.244)
C5: (81.337,137.936,-1.844)
O3': (79.542,143.345,-0.184)
Image (generated by PyMOL):