Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:0244:0241
Extra
PDB:
ATOM 1 O3' A A 243 83.063 141.094 -9.625 1.00 76.24 O
ATOM 2 P C A 244 84.485 140.348 -9.499 1.00 78.75 P
ATOM 3 OP1 C A 244 84.759 139.674 -10.803 1.00 77.43 O
ATOM 4 OP2 C A 244 84.474 139.541 -8.243 1.00 79.35 O
ATOM 5 O5' C A 244 85.541 141.529 -9.302 1.00 77.30 O
ATOM 6 C5' C A 244 86.060 142.263 -10.424 1.00 75.56 C
ATOM 7 C4' C A 244 86.984 143.358 -9.947 1.00 74.95 C
ATOM 8 O4' C A 244 86.272 144.187 -8.988 1.00 74.61 O
ATOM 9 C3' C A 244 88.223 142.917 -9.183 1.00 74.93 C
ATOM 10 O3' C A 244 89.285 142.531 -10.047 1.00 74.50 O
ATOM 11 C2' C A 244 88.575 144.174 -8.398 1.00 75.46 C
ATOM 12 O2' C A 244 89.239 145.157 -9.169 1.00 75.03 O
ATOM 13 C1' C A 244 87.184 144.687 -8.020 1.00 75.26 C
ATOM 14 N1 C A 244 86.753 144.248 -6.677 1.00 76.24 N
ATOM 15 C2 C A 244 87.253 144.929 -5.551 1.00 76.83 C
ATOM 16 O2 C A 244 88.060 145.864 -5.715 1.00 76.98 O
ATOM 17 N3 C A 244 86.851 144.548 -4.316 1.00 77.04 N
ATOM 18 C4 C A 244 85.997 143.531 -4.175 1.00 76.13 C
ATOM 19 N4 C A 244 85.621 143.203 -2.936 1.00 76.12 N
ATOM 20 C5 C A 244 85.488 142.812 -5.297 1.00 76.02 C
ATOM 21 C6 C A 244 85.885 143.201 -6.516 1.00 76.38 C
ATOM 22 P G A 245 90.040 141.130 -9.809 1.00 76.04 P
ATOM 23 OP1 G A 245 91.250 141.108 -10.677 1.00 76.92 O
ATOM 24 OP2 G A 245 89.024 140.049 -9.934 1.00 76.56 O
ATOM 25 O5' G A 245 90.540 141.181 -8.294 1.00 74.96 O
TER
ATOM 1 O3' C B 240 80.499 138.721 3.706 1.00 55.68 O
ATOM 2 P U B 241 79.372 139.336 2.744 1.00 58.63 P
ATOM 3 OP1 U B 241 78.507 140.227 3.574 1.00 58.62 O
ATOM 4 OP2 U B 241 78.751 138.230 1.959 1.00 57.96 O
ATOM 5 O5' U B 241 80.206 140.224 1.716 1.00 60.72 O
ATOM 6 C5' U B 241 80.764 141.493 2.106 1.00 64.23 C
ATOM 7 C4' U B 241 81.344 142.195 0.901 1.00 67.26 C
ATOM 8 O4' U B 241 82.468 141.425 0.397 1.00 68.05 O
ATOM 9 C3' U B 241 80.422 142.314 -0.305 1.00 69.42 C
ATOM 10 O3' U B 241 79.484 143.384 -0.189 1.00 71.13 O
ATOM 11 C2' U B 241 81.413 142.510 -1.445 1.00 69.38 C
ATOM 12 O2' U B 241 81.904 143.837 -1.512 1.00 69.22 O
ATOM 13 C1' U B 241 82.544 141.567 -1.017 1.00 69.38 C
ATOM 14 N1 U B 241 82.473 140.233 -1.639 1.00 68.74 N
ATOM 15 C2 U B 241 83.347 139.961 -2.683 1.00 68.73 C
ATOM 16 O2 U B 241 84.178 140.761 -3.083 1.00 69.62 O
ATOM 17 N3 U B 241 83.212 138.714 -3.245 1.00 67.65 N
ATOM 18 C4 U B 241 82.316 137.733 -2.886 1.00 66.05 C
ATOM 19 O4 U B 241 82.305 136.670 -3.505 1.00 65.12 O
ATOM 20 C5 U B 241 81.464 138.076 -1.791 1.00 66.65 C
ATOM 21 C6 U B 241 81.568 139.282 -1.217 1.00 68.25 C
ATOM 22 P C B 242 77.947 143.139 -0.606 1.00 73.18 P
ATOM 23 OP1 C B 242 77.254 144.455 -0.640 1.00 73.08 O
ATOM 24 OP2 C B 242 77.409 142.049 0.255 1.00 72.76 O
ATOM 25 O5' C B 242 78.044 142.577 -2.094 1.00 72.42 O
TER
ATOM 2 P C A 244 84.485 140.348 -9.499 1.00 78.75 P
ATOM 3 OP1 C A 244 84.759 139.674 -10.803 1.00 77.43 O
ATOM 4 OP2 C A 244 84.474 139.541 -8.243 1.00 79.35 O
ATOM 5 O5' C A 244 85.541 141.529 -9.302 1.00 77.30 O
ATOM 6 C5' C A 244 86.060 142.263 -10.424 1.00 75.56 C
ATOM 7 C4' C A 244 86.984 143.358 -9.947 1.00 74.95 C
ATOM 8 O4' C A 244 86.272 144.187 -8.988 1.00 74.61 O
ATOM 9 C3' C A 244 88.223 142.917 -9.183 1.00 74.93 C
ATOM 10 O3' C A 244 89.285 142.531 -10.047 1.00 74.50 O
ATOM 11 C2' C A 244 88.575 144.174 -8.398 1.00 75.46 C
ATOM 12 O2' C A 244 89.239 145.157 -9.169 1.00 75.03 O
ATOM 13 C1' C A 244 87.184 144.687 -8.020 1.00 75.26 C
ATOM 14 N1 C A 244 86.753 144.248 -6.677 1.00 76.24 N
ATOM 15 C2 C A 244 87.253 144.929 -5.551 1.00 76.83 C
ATOM 16 O2 C A 244 88.060 145.864 -5.715 1.00 76.98 O
ATOM 17 N3 C A 244 86.851 144.548 -4.316 1.00 77.04 N
ATOM 18 C4 C A 244 85.997 143.531 -4.175 1.00 76.13 C
ATOM 19 N4 C A 244 85.621 143.203 -2.936 1.00 76.12 N
ATOM 20 C5 C A 244 85.488 142.812 -5.297 1.00 76.02 C
ATOM 21 C6 C A 244 85.885 143.201 -6.516 1.00 76.38 C
ATOM 22 P G A 245 90.040 141.130 -9.809 1.00 76.04 P
ATOM 23 OP1 G A 245 91.250 141.108 -10.677 1.00 76.92 O
ATOM 24 OP2 G A 245 89.024 140.049 -9.934 1.00 76.56 O
ATOM 25 O5' G A 245 90.540 141.181 -8.294 1.00 74.96 O
TER
ATOM 1 O3' C B 240 80.499 138.721 3.706 1.00 55.68 O
ATOM 2 P U B 241 79.372 139.336 2.744 1.00 58.63 P
ATOM 3 OP1 U B 241 78.507 140.227 3.574 1.00 58.62 O
ATOM 4 OP2 U B 241 78.751 138.230 1.959 1.00 57.96 O
ATOM 5 O5' U B 241 80.206 140.224 1.716 1.00 60.72 O
ATOM 6 C5' U B 241 80.764 141.493 2.106 1.00 64.23 C
ATOM 7 C4' U B 241 81.344 142.195 0.901 1.00 67.26 C
ATOM 8 O4' U B 241 82.468 141.425 0.397 1.00 68.05 O
ATOM 9 C3' U B 241 80.422 142.314 -0.305 1.00 69.42 C
ATOM 10 O3' U B 241 79.484 143.384 -0.189 1.00 71.13 O
ATOM 11 C2' U B 241 81.413 142.510 -1.445 1.00 69.38 C
ATOM 12 O2' U B 241 81.904 143.837 -1.512 1.00 69.22 O
ATOM 13 C1' U B 241 82.544 141.567 -1.017 1.00 69.38 C
ATOM 14 N1 U B 241 82.473 140.233 -1.639 1.00 68.74 N
ATOM 15 C2 U B 241 83.347 139.961 -2.683 1.00 68.73 C
ATOM 16 O2 U B 241 84.178 140.761 -3.083 1.00 69.62 O
ATOM 17 N3 U B 241 83.212 138.714 -3.245 1.00 67.65 N
ATOM 18 C4 U B 241 82.316 137.733 -2.886 1.00 66.05 C
ATOM 19 O4 U B 241 82.305 136.670 -3.505 1.00 65.12 O
ATOM 20 C5 U B 241 81.464 138.076 -1.791 1.00 66.65 C
ATOM 21 C6 U B 241 81.568 139.282 -1.217 1.00 68.25 C
ATOM 22 P C B 242 77.947 143.139 -0.606 1.00 73.18 P
ATOM 23 OP1 C B 242 77.254 144.455 -0.640 1.00 73.08 O
ATOM 24 OP2 C B 242 77.409 142.049 0.255 1.00 72.76 O
ATOM 25 O5' C B 242 78.044 142.577 -2.094 1.00 72.42 O
TER
Atoms:
C2: (87.253,144.929,-5.551)
OP1: (84.759,139.674,-10.803)
OP2: (84.474,139.541,-8.243)
C4: (85.997,143.531,-4.175)
O5': (85.541,141.529,-9.302)
C3': (88.223,142.917,-9.183)
C1': (87.184,144.687,-8.020)
O4': (86.272,144.187,-8.988)
C5': (86.060,142.263,-10.424)
P: (84.485,140.348,-9.499)
O2: (88.060,145.864,-5.715)
C4': (86.984,143.358,-9.947)
C2': (88.575,144.174,-8.398)
O2': (89.239,145.157,-9.169)
N1: (86.753,144.248,-6.677)
N3: (86.851,144.548,-4.316)
N4: (85.621,143.203,-2.936)
C6: (85.885,143.201,-6.516)
C5: (85.488,142.812,-5.297)
O3': (89.285,142.531,-10.047)
OP1: (84.759,139.674,-10.803)
OP2: (84.474,139.541,-8.243)
C4: (85.997,143.531,-4.175)
O5': (85.541,141.529,-9.302)
C3': (88.223,142.917,-9.183)
C1': (87.184,144.687,-8.020)
O4': (86.272,144.187,-8.988)
C5': (86.060,142.263,-10.424)
P: (84.485,140.348,-9.499)
O2: (88.060,145.864,-5.715)
C4': (86.984,143.358,-9.947)
C2': (88.575,144.174,-8.398)
O2': (89.239,145.157,-9.169)
N1: (86.753,144.248,-6.677)
N3: (86.851,144.548,-4.316)
N4: (85.621,143.203,-2.936)
C6: (85.885,143.201,-6.516)
C5: (85.488,142.812,-5.297)
O3': (89.285,142.531,-10.047)
C4: (82.316,137.733,-2.886)
N3: (83.212,138.714,-3.245)
OP1: (78.507,140.227,3.574)
OP2: (78.751,138.230,1.959)
C2: (83.347,139.961,-2.683)
C1': (82.544,141.567,-1.017)
C3': (80.422,142.314,-0.305)
O5': (80.206,140.224,1.716)
O4': (82.468,141.425,0.397)
C5': (80.764,141.493,2.106)
P: (79.372,139.336,2.744)
C4': (81.344,142.195,0.901)
C2': (81.413,142.510,-1.445)
O2': (81.904,143.837,-1.512)
N1: (82.473,140.233,-1.639)
O4: (82.305,136.670,-3.505)
O2: (84.178,140.761,-3.083)
C6: (81.568,139.282,-1.217)
C5: (81.464,138.076,-1.791)
O3': (79.484,143.384,-0.189)
N3: (83.212,138.714,-3.245)
OP1: (78.507,140.227,3.574)
OP2: (78.751,138.230,1.959)
C2: (83.347,139.961,-2.683)
C1': (82.544,141.567,-1.017)
C3': (80.422,142.314,-0.305)
O5': (80.206,140.224,1.716)
O4': (82.468,141.425,0.397)
C5': (80.764,141.493,2.106)
P: (79.372,139.336,2.744)
C4': (81.344,142.195,0.901)
C2': (81.413,142.510,-1.445)
O2': (81.904,143.837,-1.512)
N1: (82.473,140.233,-1.639)
O4: (82.305,136.670,-3.505)
O2: (84.178,140.761,-3.083)
C6: (81.568,139.282,-1.217)
C5: (81.464,138.076,-1.791)
O3': (79.484,143.384,-0.189)
Image (generated by PyMOL):