Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQK:0244:0241
Extra
PDB:
ATOM 1 O3' A A 243 83.086 141.247 -9.479 1.00 88.23 O
ATOM 2 P C A 244 84.468 140.444 -9.310 1.00 89.02 P
ATOM 3 OP1 C A 244 84.736 139.729 -10.589 1.00 88.35 O
ATOM 4 OP2 C A 244 84.406 139.673 -8.035 1.00 89.66 O
ATOM 5 O5' C A 244 85.565 141.586 -9.128 1.00 87.56 O
ATOM 6 C5' C A 244 85.972 142.412 -10.231 1.00 84.85 C
ATOM 7 C4' C A 244 86.940 143.468 -9.755 1.00 83.85 C
ATOM 8 O4' C A 244 86.278 144.304 -8.767 1.00 83.54 O
ATOM 9 C3' C A 244 88.177 142.957 -9.032 1.00 83.31 C
ATOM 10 O3' C A 244 89.203 142.547 -9.933 1.00 81.65 O
ATOM 11 C2' C A 244 88.585 144.170 -8.204 1.00 83.78 C
ATOM 12 O2' C A 244 89.266 145.155 -8.956 1.00 82.54 O
ATOM 13 C1' C A 244 87.218 144.719 -7.786 1.00 84.24 C
ATOM 14 N1 C A 244 86.768 144.244 -6.462 1.00 85.15 N
ATOM 15 C2 C A 244 87.207 144.924 -5.307 1.00 85.78 C
ATOM 16 O2 C A 244 87.972 145.898 -5.427 1.00 85.74 O
ATOM 17 N3 C A 244 86.787 144.501 -4.092 1.00 86.23 N
ATOM 18 C4 C A 244 85.970 143.450 -3.996 1.00 85.83 C
ATOM 19 N4 C A 244 85.571 143.079 -2.776 1.00 85.39 N
ATOM 20 C5 C A 244 85.519 142.735 -5.147 1.00 85.65 C
ATOM 21 C6 C A 244 85.938 143.162 -6.346 1.00 85.38 C
ATOM 22 P G A 245 89.875 141.091 -9.776 1.00 82.28 P
ATOM 23 OP1 G A 245 91.015 141.017 -10.720 1.00 82.72 O
ATOM 24 OP2 G A 245 88.796 140.068 -9.850 1.00 82.57 O
ATOM 25 O5' G A 245 90.475 141.082 -8.297 1.00 82.04 O
TER
ATOM 1 O3' C B 240 80.467 138.772 3.763 1.00 61.77 O
ATOM 2 P U B 241 79.293 139.309 2.811 1.00 65.00 P
ATOM 3 OP1 U B 241 78.396 140.174 3.626 1.00 64.69 O
ATOM 4 OP2 U B 241 78.720 138.152 2.068 1.00 63.71 O
ATOM 5 O5' U B 241 80.061 140.221 1.754 1.00 67.48 O
ATOM 6 C5' U B 241 80.691 141.452 2.153 1.00 71.59 C
ATOM 7 C4' U B 241 81.341 142.120 0.962 1.00 74.65 C
ATOM 8 O4' U B 241 82.455 141.314 0.488 1.00 75.09 O
ATOM 9 C3' U B 241 80.469 142.275 -0.273 1.00 77.25 C
ATOM 10 O3' U B 241 79.556 143.365 -0.175 1.00 80.85 O
ATOM 11 C2' U B 241 81.509 142.459 -1.370 1.00 76.88 C
ATOM 12 O2' U B 241 82.053 143.766 -1.397 1.00 76.69 O
ATOM 13 C1' U B 241 82.590 141.473 -0.919 1.00 76.23 C
ATOM 14 N1 U B 241 82.471 140.155 -1.566 1.00 74.85 N
ATOM 15 C2 U B 241 83.201 139.939 -2.724 1.00 74.64 C
ATOM 16 O2 U B 241 83.939 140.778 -3.211 1.00 75.30 O
ATOM 17 N3 U B 241 83.035 138.699 -3.293 1.00 73.74 N
ATOM 18 C4 U B 241 82.230 137.679 -2.840 1.00 71.90 C
ATOM 19 O4 U B 241 82.178 136.626 -3.472 1.00 70.44 O
ATOM 20 C5 U B 241 81.518 137.973 -1.638 1.00 72.99 C
ATOM 21 C6 U B 241 81.658 139.168 -1.056 1.00 74.61 C
ATOM 22 P C B 242 78.020 143.146 -0.604 1.00 83.21 P
ATOM 23 OP1 C B 242 77.352 144.469 -0.652 1.00 83.21 O
ATOM 24 OP2 C B 242 77.461 142.074 0.264 1.00 83.18 O
ATOM 25 O5' C B 242 78.128 142.570 -2.086 1.00 83.80 O
TER
ATOM 2 P C A 244 84.468 140.444 -9.310 1.00 89.02 P
ATOM 3 OP1 C A 244 84.736 139.729 -10.589 1.00 88.35 O
ATOM 4 OP2 C A 244 84.406 139.673 -8.035 1.00 89.66 O
ATOM 5 O5' C A 244 85.565 141.586 -9.128 1.00 87.56 O
ATOM 6 C5' C A 244 85.972 142.412 -10.231 1.00 84.85 C
ATOM 7 C4' C A 244 86.940 143.468 -9.755 1.00 83.85 C
ATOM 8 O4' C A 244 86.278 144.304 -8.767 1.00 83.54 O
ATOM 9 C3' C A 244 88.177 142.957 -9.032 1.00 83.31 C
ATOM 10 O3' C A 244 89.203 142.547 -9.933 1.00 81.65 O
ATOM 11 C2' C A 244 88.585 144.170 -8.204 1.00 83.78 C
ATOM 12 O2' C A 244 89.266 145.155 -8.956 1.00 82.54 O
ATOM 13 C1' C A 244 87.218 144.719 -7.786 1.00 84.24 C
ATOM 14 N1 C A 244 86.768 144.244 -6.462 1.00 85.15 N
ATOM 15 C2 C A 244 87.207 144.924 -5.307 1.00 85.78 C
ATOM 16 O2 C A 244 87.972 145.898 -5.427 1.00 85.74 O
ATOM 17 N3 C A 244 86.787 144.501 -4.092 1.00 86.23 N
ATOM 18 C4 C A 244 85.970 143.450 -3.996 1.00 85.83 C
ATOM 19 N4 C A 244 85.571 143.079 -2.776 1.00 85.39 N
ATOM 20 C5 C A 244 85.519 142.735 -5.147 1.00 85.65 C
ATOM 21 C6 C A 244 85.938 143.162 -6.346 1.00 85.38 C
ATOM 22 P G A 245 89.875 141.091 -9.776 1.00 82.28 P
ATOM 23 OP1 G A 245 91.015 141.017 -10.720 1.00 82.72 O
ATOM 24 OP2 G A 245 88.796 140.068 -9.850 1.00 82.57 O
ATOM 25 O5' G A 245 90.475 141.082 -8.297 1.00 82.04 O
TER
ATOM 1 O3' C B 240 80.467 138.772 3.763 1.00 61.77 O
ATOM 2 P U B 241 79.293 139.309 2.811 1.00 65.00 P
ATOM 3 OP1 U B 241 78.396 140.174 3.626 1.00 64.69 O
ATOM 4 OP2 U B 241 78.720 138.152 2.068 1.00 63.71 O
ATOM 5 O5' U B 241 80.061 140.221 1.754 1.00 67.48 O
ATOM 6 C5' U B 241 80.691 141.452 2.153 1.00 71.59 C
ATOM 7 C4' U B 241 81.341 142.120 0.962 1.00 74.65 C
ATOM 8 O4' U B 241 82.455 141.314 0.488 1.00 75.09 O
ATOM 9 C3' U B 241 80.469 142.275 -0.273 1.00 77.25 C
ATOM 10 O3' U B 241 79.556 143.365 -0.175 1.00 80.85 O
ATOM 11 C2' U B 241 81.509 142.459 -1.370 1.00 76.88 C
ATOM 12 O2' U B 241 82.053 143.766 -1.397 1.00 76.69 O
ATOM 13 C1' U B 241 82.590 141.473 -0.919 1.00 76.23 C
ATOM 14 N1 U B 241 82.471 140.155 -1.566 1.00 74.85 N
ATOM 15 C2 U B 241 83.201 139.939 -2.724 1.00 74.64 C
ATOM 16 O2 U B 241 83.939 140.778 -3.211 1.00 75.30 O
ATOM 17 N3 U B 241 83.035 138.699 -3.293 1.00 73.74 N
ATOM 18 C4 U B 241 82.230 137.679 -2.840 1.00 71.90 C
ATOM 19 O4 U B 241 82.178 136.626 -3.472 1.00 70.44 O
ATOM 20 C5 U B 241 81.518 137.973 -1.638 1.00 72.99 C
ATOM 21 C6 U B 241 81.658 139.168 -1.056 1.00 74.61 C
ATOM 22 P C B 242 78.020 143.146 -0.604 1.00 83.21 P
ATOM 23 OP1 C B 242 77.352 144.469 -0.652 1.00 83.21 O
ATOM 24 OP2 C B 242 77.461 142.074 0.264 1.00 83.18 O
ATOM 25 O5' C B 242 78.128 142.570 -2.086 1.00 83.80 O
TER
Atoms:
C2: (87.207,144.924,-5.307)
OP1: (84.736,139.729,-10.589)
OP2: (84.406,139.673,-8.035)
C4: (85.970,143.450,-3.996)
O5': (85.565,141.586,-9.128)
C3': (88.177,142.957,-9.032)
C1': (87.218,144.719,-7.786)
O4': (86.278,144.304,-8.767)
C5': (85.972,142.412,-10.231)
P: (84.468,140.444,-9.310)
O2: (87.972,145.898,-5.427)
C4': (86.940,143.468,-9.755)
C2': (88.585,144.170,-8.204)
O2': (89.266,145.155,-8.956)
N1: (86.768,144.244,-6.462)
N3: (86.787,144.501,-4.092)
N4: (85.571,143.079,-2.776)
C6: (85.938,143.162,-6.346)
C5: (85.519,142.735,-5.147)
O3': (89.203,142.547,-9.933)
OP1: (84.736,139.729,-10.589)
OP2: (84.406,139.673,-8.035)
C4: (85.970,143.450,-3.996)
O5': (85.565,141.586,-9.128)
C3': (88.177,142.957,-9.032)
C1': (87.218,144.719,-7.786)
O4': (86.278,144.304,-8.767)
C5': (85.972,142.412,-10.231)
P: (84.468,140.444,-9.310)
O2: (87.972,145.898,-5.427)
C4': (86.940,143.468,-9.755)
C2': (88.585,144.170,-8.204)
O2': (89.266,145.155,-8.956)
N1: (86.768,144.244,-6.462)
N3: (86.787,144.501,-4.092)
N4: (85.571,143.079,-2.776)
C6: (85.938,143.162,-6.346)
C5: (85.519,142.735,-5.147)
O3': (89.203,142.547,-9.933)
C4: (82.230,137.679,-2.840)
N3: (83.035,138.699,-3.293)
OP1: (78.396,140.174,3.626)
OP2: (78.720,138.152,2.068)
C2: (83.201,139.939,-2.724)
C1': (82.590,141.473,-0.919)
C3': (80.469,142.275,-0.273)
O5': (80.061,140.221,1.754)
O4': (82.455,141.314,0.488)
C5': (80.691,141.452,2.153)
P: (79.293,139.309,2.811)
C4': (81.341,142.120,0.962)
C2': (81.509,142.459,-1.370)
O2': (82.053,143.766,-1.397)
N1: (82.471,140.155,-1.566)
O4: (82.178,136.626,-3.472)
O2: (83.939,140.778,-3.211)
C6: (81.658,139.168,-1.056)
C5: (81.518,137.973,-1.638)
O3': (79.556,143.365,-0.175)
N3: (83.035,138.699,-3.293)
OP1: (78.396,140.174,3.626)
OP2: (78.720,138.152,2.068)
C2: (83.201,139.939,-2.724)
C1': (82.590,141.473,-0.919)
C3': (80.469,142.275,-0.273)
O5': (80.061,140.221,1.754)
O4': (82.455,141.314,0.488)
C5': (80.691,141.452,2.153)
P: (79.293,139.309,2.811)
C4': (81.341,142.120,0.962)
C2': (81.509,142.459,-1.370)
O2': (82.053,143.766,-1.397)
N1: (82.471,140.155,-1.566)
O4: (82.178,136.626,-3.472)
O2: (83.939,140.778,-3.211)
C6: (81.658,139.168,-1.056)
C5: (81.518,137.973,-1.638)
O3': (79.556,143.365,-0.175)
Image (generated by PyMOL):