Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:0244:0241
Extra
PDB:
ATOM 1 O3' A A 243 82.869 141.175 -9.569 1.00 93.63 O
ATOM 2 P C A 244 84.287 140.424 -9.468 1.00 95.15 P
ATOM 3 OP1 C A 244 84.553 139.791 -10.791 1.00 95.28 O
ATOM 4 OP2 C A 244 84.282 139.582 -8.242 1.00 96.61 O
ATOM 5 O5' C A 244 85.344 141.597 -9.248 1.00 94.52 O
ATOM 6 C5' C A 244 85.847 142.370 -10.353 1.00 92.23 C
ATOM 7 C4' C A 244 86.821 143.413 -9.856 1.00 91.47 C
ATOM 8 O4' C A 244 86.141 144.269 -8.897 1.00 91.44 O
ATOM 9 C3' C A 244 88.025 142.887 -9.088 1.00 90.93 C
ATOM 10 O3' C A 244 89.074 142.458 -9.953 1.00 89.14 O
ATOM 11 C2' C A 244 88.424 144.097 -8.251 1.00 91.60 C
ATOM 12 O2' C A 244 89.158 145.065 -8.975 1.00 91.21 O
ATOM 13 C1' C A 244 87.053 144.675 -7.889 1.00 92.14 C
ATOM 14 N1 C A 244 86.549 144.221 -6.576 1.00 93.22 N
ATOM 15 C2 C A 244 86.934 144.926 -5.422 1.00 94.29 C
ATOM 16 O2 C A 244 87.694 145.905 -5.532 1.00 94.91 O
ATOM 17 N3 C A 244 86.470 144.521 -4.217 1.00 94.87 N
ATOM 18 C4 C A 244 85.659 143.464 -4.133 1.00 94.50 C
ATOM 19 N4 C A 244 85.218 143.110 -2.920 1.00 93.70 N
ATOM 20 C5 C A 244 85.260 142.725 -5.286 1.00 94.21 C
ATOM 21 C6 C A 244 85.723 143.135 -6.475 1.00 93.84 C
ATOM 22 P G A 245 89.739 141.006 -9.745 1.00 89.49 P
ATOM 23 OP1 G A 245 90.872 140.881 -10.696 1.00 89.85 O
ATOM 24 OP2 G A 245 88.646 139.997 -9.772 1.00 90.05 O
ATOM 25 O5' G A 245 90.347 141.051 -8.270 1.00 89.04 O
TER
ATOM 1 O3' C B 240 80.276 138.724 3.736 1.00 68.80 O
ATOM 2 P U B 241 79.086 139.256 2.801 1.00 71.19 P
ATOM 3 OP1 U B 241 78.198 140.102 3.647 1.00 70.55 O
ATOM 4 OP2 U B 241 78.511 138.103 2.059 1.00 69.76 O
ATOM 5 O5' U B 241 79.834 140.185 1.744 1.00 72.99 O
ATOM 6 C5' U B 241 80.501 141.393 2.160 1.00 75.66 C
ATOM 7 C4' U B 241 81.186 142.052 0.982 1.00 77.63 C
ATOM 8 O4' U B 241 82.277 141.214 0.511 1.00 77.50 O
ATOM 9 C3' U B 241 80.338 142.257 -0.262 1.00 79.51 C
ATOM 10 O3' U B 241 79.462 143.376 -0.157 1.00 82.89 O
ATOM 11 C2' U B 241 81.402 142.427 -1.339 1.00 78.49 C
ATOM 12 O2' U B 241 81.999 143.710 -1.323 1.00 77.24 O
ATOM 13 C1' U B 241 82.440 141.394 -0.891 1.00 77.94 C
ATOM 14 N1 U B 241 82.300 140.093 -1.569 1.00 76.51 N
ATOM 15 C2 U B 241 83.030 139.891 -2.731 1.00 76.29 C
ATOM 16 O2 U B 241 83.780 140.728 -3.200 1.00 77.41 O
ATOM 17 N3 U B 241 82.848 138.669 -3.328 1.00 75.48 N
ATOM 18 C4 U B 241 82.027 137.652 -2.903 1.00 73.96 C
ATOM 19 O4 U B 241 81.959 136.614 -3.563 1.00 72.35 O
ATOM 20 C5 U B 241 81.316 137.929 -1.696 1.00 74.58 C
ATOM 21 C6 U B 241 81.473 139.108 -1.084 1.00 75.90 C
ATOM 22 P C B 242 77.921 143.216 -0.594 1.00 85.36 P
ATOM 23 OP1 C B 242 77.328 144.572 -0.714 1.00 85.56 O
ATOM 24 OP2 C B 242 77.300 142.223 0.322 1.00 85.11 O
ATOM 25 O5' C B 242 78.013 142.564 -2.046 1.00 85.86 O
TER
ATOM 2 P C A 244 84.287 140.424 -9.468 1.00 95.15 P
ATOM 3 OP1 C A 244 84.553 139.791 -10.791 1.00 95.28 O
ATOM 4 OP2 C A 244 84.282 139.582 -8.242 1.00 96.61 O
ATOM 5 O5' C A 244 85.344 141.597 -9.248 1.00 94.52 O
ATOM 6 C5' C A 244 85.847 142.370 -10.353 1.00 92.23 C
ATOM 7 C4' C A 244 86.821 143.413 -9.856 1.00 91.47 C
ATOM 8 O4' C A 244 86.141 144.269 -8.897 1.00 91.44 O
ATOM 9 C3' C A 244 88.025 142.887 -9.088 1.00 90.93 C
ATOM 10 O3' C A 244 89.074 142.458 -9.953 1.00 89.14 O
ATOM 11 C2' C A 244 88.424 144.097 -8.251 1.00 91.60 C
ATOM 12 O2' C A 244 89.158 145.065 -8.975 1.00 91.21 O
ATOM 13 C1' C A 244 87.053 144.675 -7.889 1.00 92.14 C
ATOM 14 N1 C A 244 86.549 144.221 -6.576 1.00 93.22 N
ATOM 15 C2 C A 244 86.934 144.926 -5.422 1.00 94.29 C
ATOM 16 O2 C A 244 87.694 145.905 -5.532 1.00 94.91 O
ATOM 17 N3 C A 244 86.470 144.521 -4.217 1.00 94.87 N
ATOM 18 C4 C A 244 85.659 143.464 -4.133 1.00 94.50 C
ATOM 19 N4 C A 244 85.218 143.110 -2.920 1.00 93.70 N
ATOM 20 C5 C A 244 85.260 142.725 -5.286 1.00 94.21 C
ATOM 21 C6 C A 244 85.723 143.135 -6.475 1.00 93.84 C
ATOM 22 P G A 245 89.739 141.006 -9.745 1.00 89.49 P
ATOM 23 OP1 G A 245 90.872 140.881 -10.696 1.00 89.85 O
ATOM 24 OP2 G A 245 88.646 139.997 -9.772 1.00 90.05 O
ATOM 25 O5' G A 245 90.347 141.051 -8.270 1.00 89.04 O
TER
ATOM 1 O3' C B 240 80.276 138.724 3.736 1.00 68.80 O
ATOM 2 P U B 241 79.086 139.256 2.801 1.00 71.19 P
ATOM 3 OP1 U B 241 78.198 140.102 3.647 1.00 70.55 O
ATOM 4 OP2 U B 241 78.511 138.103 2.059 1.00 69.76 O
ATOM 5 O5' U B 241 79.834 140.185 1.744 1.00 72.99 O
ATOM 6 C5' U B 241 80.501 141.393 2.160 1.00 75.66 C
ATOM 7 C4' U B 241 81.186 142.052 0.982 1.00 77.63 C
ATOM 8 O4' U B 241 82.277 141.214 0.511 1.00 77.50 O
ATOM 9 C3' U B 241 80.338 142.257 -0.262 1.00 79.51 C
ATOM 10 O3' U B 241 79.462 143.376 -0.157 1.00 82.89 O
ATOM 11 C2' U B 241 81.402 142.427 -1.339 1.00 78.49 C
ATOM 12 O2' U B 241 81.999 143.710 -1.323 1.00 77.24 O
ATOM 13 C1' U B 241 82.440 141.394 -0.891 1.00 77.94 C
ATOM 14 N1 U B 241 82.300 140.093 -1.569 1.00 76.51 N
ATOM 15 C2 U B 241 83.030 139.891 -2.731 1.00 76.29 C
ATOM 16 O2 U B 241 83.780 140.728 -3.200 1.00 77.41 O
ATOM 17 N3 U B 241 82.848 138.669 -3.328 1.00 75.48 N
ATOM 18 C4 U B 241 82.027 137.652 -2.903 1.00 73.96 C
ATOM 19 O4 U B 241 81.959 136.614 -3.563 1.00 72.35 O
ATOM 20 C5 U B 241 81.316 137.929 -1.696 1.00 74.58 C
ATOM 21 C6 U B 241 81.473 139.108 -1.084 1.00 75.90 C
ATOM 22 P C B 242 77.921 143.216 -0.594 1.00 85.36 P
ATOM 23 OP1 C B 242 77.328 144.572 -0.714 1.00 85.56 O
ATOM 24 OP2 C B 242 77.300 142.223 0.322 1.00 85.11 O
ATOM 25 O5' C B 242 78.013 142.564 -2.046 1.00 85.86 O
TER
Atoms:
C2: (86.934,144.926,-5.422)
OP1: (84.553,139.791,-10.791)
OP2: (84.282,139.582,-8.242)
C4: (85.659,143.464,-4.133)
O5': (85.344,141.597,-9.248)
C3': (88.025,142.887,-9.088)
C1': (87.053,144.675,-7.889)
O4': (86.141,144.269,-8.897)
C5': (85.847,142.370,-10.353)
P: (84.287,140.424,-9.468)
O2: (87.694,145.905,-5.532)
C4': (86.821,143.413,-9.856)
C2': (88.424,144.097,-8.251)
O2': (89.158,145.065,-8.975)
N1: (86.549,144.221,-6.576)
N3: (86.470,144.521,-4.217)
N4: (85.218,143.110,-2.920)
C6: (85.723,143.135,-6.475)
C5: (85.260,142.725,-5.286)
O3': (89.074,142.458,-9.953)
OP1: (84.553,139.791,-10.791)
OP2: (84.282,139.582,-8.242)
C4: (85.659,143.464,-4.133)
O5': (85.344,141.597,-9.248)
C3': (88.025,142.887,-9.088)
C1': (87.053,144.675,-7.889)
O4': (86.141,144.269,-8.897)
C5': (85.847,142.370,-10.353)
P: (84.287,140.424,-9.468)
O2: (87.694,145.905,-5.532)
C4': (86.821,143.413,-9.856)
C2': (88.424,144.097,-8.251)
O2': (89.158,145.065,-8.975)
N1: (86.549,144.221,-6.576)
N3: (86.470,144.521,-4.217)
N4: (85.218,143.110,-2.920)
C6: (85.723,143.135,-6.475)
C5: (85.260,142.725,-5.286)
O3': (89.074,142.458,-9.953)
C4: (82.027,137.652,-2.903)
N3: (82.848,138.669,-3.328)
OP1: (78.198,140.102,3.647)
OP2: (78.511,138.103,2.059)
C2: (83.030,139.891,-2.731)
C1': (82.440,141.394,-0.891)
C3': (80.338,142.257,-0.262)
O5': (79.834,140.185,1.744)
O4': (82.277,141.214,0.511)
C5': (80.501,141.393,2.160)
P: (79.086,139.256,2.801)
C4': (81.186,142.052,0.982)
C2': (81.402,142.427,-1.339)
O2': (81.999,143.710,-1.323)
N1: (82.300,140.093,-1.569)
O4: (81.959,136.614,-3.563)
O2: (83.780,140.728,-3.200)
C6: (81.473,139.108,-1.084)
C5: (81.316,137.929,-1.696)
O3': (79.462,143.376,-0.157)
N3: (82.848,138.669,-3.328)
OP1: (78.198,140.102,3.647)
OP2: (78.511,138.103,2.059)
C2: (83.030,139.891,-2.731)
C1': (82.440,141.394,-0.891)
C3': (80.338,142.257,-0.262)
O5': (79.834,140.185,1.744)
O4': (82.277,141.214,0.511)
C5': (80.501,141.393,2.160)
P: (79.086,139.256,2.801)
C4': (81.186,142.052,0.982)
C2': (81.402,142.427,-1.339)
O2': (81.999,143.710,-1.323)
N1: (82.300,140.093,-1.569)
O4: (81.959,136.614,-3.563)
O2: (83.780,140.728,-3.200)
C6: (81.473,139.108,-1.084)
C5: (81.316,137.929,-1.696)
O3': (79.462,143.376,-0.157)
Image (generated by PyMOL):