Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:0244:0241
Extra
PDB:
ATOM 1 O3' A A 243 83.036 141.251 -9.605 1.00 91.98 O
ATOM 2 P C A 244 84.454 140.501 -9.478 1.00 93.44 P
ATOM 3 OP1 C A 244 84.755 139.876 -10.796 1.00 93.04 O
ATOM 4 OP2 C A 244 84.430 139.655 -8.253 1.00 94.30 O
ATOM 5 O5' C A 244 85.502 141.678 -9.242 1.00 93.11 O
ATOM 6 C5' C A 244 85.930 142.520 -10.327 1.00 90.85 C
ATOM 7 C4' C A 244 86.853 143.602 -9.816 1.00 90.12 C
ATOM 8 O4' C A 244 86.146 144.413 -8.840 1.00 90.21 O
ATOM 9 C3' C A 244 88.089 143.134 -9.064 1.00 89.80 C
ATOM 10 O3' C A 244 89.143 142.745 -9.937 1.00 88.36 O
ATOM 11 C2' C A 244 88.449 144.373 -8.256 1.00 90.48 C
ATOM 12 O2' C A 244 89.099 145.366 -9.024 1.00 90.28 O
ATOM 13 C1' C A 244 87.061 144.879 -7.859 1.00 91.02 C
ATOM 14 N1 C A 244 86.633 144.400 -6.529 1.00 92.48 N
ATOM 15 C2 C A 244 87.124 145.055 -5.384 1.00 93.58 C
ATOM 16 O2 C A 244 87.913 146.008 -5.520 1.00 94.03 O
ATOM 17 N3 C A 244 86.731 144.630 -4.161 1.00 93.88 N
ATOM 18 C4 C A 244 85.893 143.598 -4.050 1.00 93.67 C
ATOM 19 N4 C A 244 85.525 143.224 -2.820 1.00 93.57 N
ATOM 20 C5 C A 244 85.388 142.908 -5.193 1.00 93.55 C
ATOM 21 C6 C A 244 85.778 143.339 -6.400 1.00 92.93 C
ATOM 22 P G A 245 89.850 141.312 -9.748 1.00 88.63 P
ATOM 23 OP1 G A 245 91.017 141.277 -10.664 1.00 89.85 O
ATOM 24 OP2 G A 245 88.802 140.257 -9.851 1.00 88.40 O
ATOM 25 O5' G A 245 90.411 141.331 -8.253 1.00 87.82 O
TER
ATOM 1 O3' C B 240 80.376 138.858 3.750 1.00 69.02 O
ATOM 2 P U B 241 79.219 139.389 2.772 1.00 72.09 P
ATOM 3 OP1 U B 241 78.306 140.255 3.567 1.00 72.02 O
ATOM 4 OP2 U B 241 78.663 138.231 2.022 1.00 71.50 O
ATOM 5 O5' U B 241 80.009 140.304 1.733 1.00 74.07 O
ATOM 6 C5' U B 241 80.593 141.556 2.144 1.00 76.68 C
ATOM 7 C4' U B 241 81.259 142.240 0.970 1.00 78.69 C
ATOM 8 O4' U B 241 82.388 141.446 0.516 1.00 78.81 O
ATOM 9 C3' U B 241 80.419 142.409 -0.286 1.00 80.48 C
ATOM 10 O3' U B 241 79.510 143.503 -0.204 1.00 82.82 O
ATOM 11 C2' U B 241 81.489 142.615 -1.348 1.00 80.16 C
ATOM 12 O2' U B 241 82.036 143.922 -1.321 1.00 79.23 O
ATOM 13 C1' U B 241 82.555 141.617 -0.885 1.00 79.52 C
ATOM 14 N1 U B 241 82.439 140.305 -1.545 1.00 78.39 N
ATOM 15 C2 U B 241 83.182 140.094 -2.696 1.00 78.33 C
ATOM 16 O2 U B 241 83.936 140.931 -3.166 1.00 77.97 O
ATOM 17 N3 U B 241 83.008 138.863 -3.283 1.00 77.72 N
ATOM 18 C4 U B 241 82.186 137.845 -2.851 1.00 75.90 C
ATOM 19 O4 U B 241 82.125 136.802 -3.501 1.00 74.18 O
ATOM 20 C5 U B 241 81.468 138.130 -1.650 1.00 76.57 C
ATOM 21 C6 U B 241 81.616 139.317 -1.050 1.00 78.03 C
ATOM 22 P C B 242 77.980 143.294 -0.656 1.00 85.08 P
ATOM 23 OP1 C B 242 77.339 144.630 -0.792 1.00 84.65 O
ATOM 24 OP2 C B 242 77.383 142.286 0.258 1.00 84.42 O
ATOM 25 O5' C B 242 78.093 142.643 -2.106 1.00 85.17 O
TER
ATOM 2 P C A 244 84.454 140.501 -9.478 1.00 93.44 P
ATOM 3 OP1 C A 244 84.755 139.876 -10.796 1.00 93.04 O
ATOM 4 OP2 C A 244 84.430 139.655 -8.253 1.00 94.30 O
ATOM 5 O5' C A 244 85.502 141.678 -9.242 1.00 93.11 O
ATOM 6 C5' C A 244 85.930 142.520 -10.327 1.00 90.85 C
ATOM 7 C4' C A 244 86.853 143.602 -9.816 1.00 90.12 C
ATOM 8 O4' C A 244 86.146 144.413 -8.840 1.00 90.21 O
ATOM 9 C3' C A 244 88.089 143.134 -9.064 1.00 89.80 C
ATOM 10 O3' C A 244 89.143 142.745 -9.937 1.00 88.36 O
ATOM 11 C2' C A 244 88.449 144.373 -8.256 1.00 90.48 C
ATOM 12 O2' C A 244 89.099 145.366 -9.024 1.00 90.28 O
ATOM 13 C1' C A 244 87.061 144.879 -7.859 1.00 91.02 C
ATOM 14 N1 C A 244 86.633 144.400 -6.529 1.00 92.48 N
ATOM 15 C2 C A 244 87.124 145.055 -5.384 1.00 93.58 C
ATOM 16 O2 C A 244 87.913 146.008 -5.520 1.00 94.03 O
ATOM 17 N3 C A 244 86.731 144.630 -4.161 1.00 93.88 N
ATOM 18 C4 C A 244 85.893 143.598 -4.050 1.00 93.67 C
ATOM 19 N4 C A 244 85.525 143.224 -2.820 1.00 93.57 N
ATOM 20 C5 C A 244 85.388 142.908 -5.193 1.00 93.55 C
ATOM 21 C6 C A 244 85.778 143.339 -6.400 1.00 92.93 C
ATOM 22 P G A 245 89.850 141.312 -9.748 1.00 88.63 P
ATOM 23 OP1 G A 245 91.017 141.277 -10.664 1.00 89.85 O
ATOM 24 OP2 G A 245 88.802 140.257 -9.851 1.00 88.40 O
ATOM 25 O5' G A 245 90.411 141.331 -8.253 1.00 87.82 O
TER
ATOM 1 O3' C B 240 80.376 138.858 3.750 1.00 69.02 O
ATOM 2 P U B 241 79.219 139.389 2.772 1.00 72.09 P
ATOM 3 OP1 U B 241 78.306 140.255 3.567 1.00 72.02 O
ATOM 4 OP2 U B 241 78.663 138.231 2.022 1.00 71.50 O
ATOM 5 O5' U B 241 80.009 140.304 1.733 1.00 74.07 O
ATOM 6 C5' U B 241 80.593 141.556 2.144 1.00 76.68 C
ATOM 7 C4' U B 241 81.259 142.240 0.970 1.00 78.69 C
ATOM 8 O4' U B 241 82.388 141.446 0.516 1.00 78.81 O
ATOM 9 C3' U B 241 80.419 142.409 -0.286 1.00 80.48 C
ATOM 10 O3' U B 241 79.510 143.503 -0.204 1.00 82.82 O
ATOM 11 C2' U B 241 81.489 142.615 -1.348 1.00 80.16 C
ATOM 12 O2' U B 241 82.036 143.922 -1.321 1.00 79.23 O
ATOM 13 C1' U B 241 82.555 141.617 -0.885 1.00 79.52 C
ATOM 14 N1 U B 241 82.439 140.305 -1.545 1.00 78.39 N
ATOM 15 C2 U B 241 83.182 140.094 -2.696 1.00 78.33 C
ATOM 16 O2 U B 241 83.936 140.931 -3.166 1.00 77.97 O
ATOM 17 N3 U B 241 83.008 138.863 -3.283 1.00 77.72 N
ATOM 18 C4 U B 241 82.186 137.845 -2.851 1.00 75.90 C
ATOM 19 O4 U B 241 82.125 136.802 -3.501 1.00 74.18 O
ATOM 20 C5 U B 241 81.468 138.130 -1.650 1.00 76.57 C
ATOM 21 C6 U B 241 81.616 139.317 -1.050 1.00 78.03 C
ATOM 22 P C B 242 77.980 143.294 -0.656 1.00 85.08 P
ATOM 23 OP1 C B 242 77.339 144.630 -0.792 1.00 84.65 O
ATOM 24 OP2 C B 242 77.383 142.286 0.258 1.00 84.42 O
ATOM 25 O5' C B 242 78.093 142.643 -2.106 1.00 85.17 O
TER
Atoms:
C2: (87.124,145.055,-5.384)
OP1: (84.755,139.876,-10.796)
OP2: (84.430,139.655,-8.253)
C4: (85.893,143.598,-4.050)
O5': (85.502,141.678,-9.242)
C3': (88.089,143.134,-9.064)
C1': (87.061,144.879,-7.859)
O4': (86.146,144.413,-8.840)
C5': (85.930,142.520,-10.327)
P: (84.454,140.501,-9.478)
O2: (87.913,146.008,-5.520)
C4': (86.853,143.602,-9.816)
C2': (88.449,144.373,-8.256)
O2': (89.099,145.366,-9.024)
N1: (86.633,144.400,-6.529)
N3: (86.731,144.630,-4.161)
N4: (85.525,143.224,-2.820)
C6: (85.778,143.339,-6.400)
C5: (85.388,142.908,-5.193)
O3': (89.143,142.745,-9.937)
OP1: (84.755,139.876,-10.796)
OP2: (84.430,139.655,-8.253)
C4: (85.893,143.598,-4.050)
O5': (85.502,141.678,-9.242)
C3': (88.089,143.134,-9.064)
C1': (87.061,144.879,-7.859)
O4': (86.146,144.413,-8.840)
C5': (85.930,142.520,-10.327)
P: (84.454,140.501,-9.478)
O2: (87.913,146.008,-5.520)
C4': (86.853,143.602,-9.816)
C2': (88.449,144.373,-8.256)
O2': (89.099,145.366,-9.024)
N1: (86.633,144.400,-6.529)
N3: (86.731,144.630,-4.161)
N4: (85.525,143.224,-2.820)
C6: (85.778,143.339,-6.400)
C5: (85.388,142.908,-5.193)
O3': (89.143,142.745,-9.937)
C4: (82.186,137.845,-2.851)
N3: (83.008,138.863,-3.283)
OP1: (78.306,140.255,3.567)
OP2: (78.663,138.231,2.022)
C2: (83.182,140.094,-2.696)
C1': (82.555,141.617,-0.885)
C3': (80.419,142.409,-0.286)
O5': (80.009,140.304,1.733)
O4': (82.388,141.446,0.516)
C5': (80.593,141.556,2.144)
P: (79.219,139.389,2.772)
C4': (81.259,142.240,0.970)
C2': (81.489,142.615,-1.348)
O2': (82.036,143.922,-1.321)
N1: (82.439,140.305,-1.545)
O4: (82.125,136.802,-3.501)
O2: (83.936,140.931,-3.166)
C6: (81.616,139.317,-1.050)
C5: (81.468,138.130,-1.650)
O3': (79.510,143.503,-0.204)
N3: (83.008,138.863,-3.283)
OP1: (78.306,140.255,3.567)
OP2: (78.663,138.231,2.022)
C2: (83.182,140.094,-2.696)
C1': (82.555,141.617,-0.885)
C3': (80.419,142.409,-0.286)
O5': (80.009,140.304,1.733)
O4': (82.388,141.446,0.516)
C5': (80.593,141.556,2.144)
P: (79.219,139.389,2.772)
C4': (81.259,142.240,0.970)
C2': (81.489,142.615,-1.348)
O2': (82.036,143.922,-1.321)
N1: (82.439,140.305,-1.545)
O4: (82.125,136.802,-3.501)
O2: (83.936,140.931,-3.166)
C6: (81.616,139.317,-1.050)
C5: (81.468,138.130,-1.650)
O3': (79.510,143.503,-0.204)
Image (generated by PyMOL):