ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5B:2352:2314

Extra

PDB:
ATOM 1 O3' A A 351 -49.770 41.580 90.685 1.00 58.07 O
ATOM 2 P A A 352 -49.624 42.221 89.201 1.00 55.05 P
ATOM 3 OP1 A A 352 -50.944 42.753 88.819 1.00 55.50 O
ATOM 4 OP2 A A 352 -48.974 41.204 88.323 1.00 54.67 O
ATOM 5 O5' A A 352 -48.637 43.421 89.456 1.00 54.89 O
ATOM 6 C5' A A 352 -49.080 44.554 90.182 1.00 55.24 C
ATOM 7 C4' A A 352 -48.047 45.022 91.153 1.00 55.10 C
ATOM 8 O4' A A 352 -47.828 44.000 92.155 1.00 55.05 O
ATOM 9 C3' A A 352 -46.690 45.282 90.554 1.00 54.66 C
ATOM 10 O3' A A 352 -46.592 46.565 90.007 1.00 54.74 O
ATOM 11 C2' A A 352 -45.735 45.032 91.707 1.00 54.52 C
ATOM 12 O2' A A 352 -45.644 46.169 92.537 1.00 54.77 O
ATOM 13 C1' A A 352 -46.466 43.931 92.481 1.00 54.70 C
ATOM 14 N9 A A 352 -45.973 42.581 92.138 1.00 54.38 N
ATOM 15 C8 A A 352 -46.713 41.524 91.673 1.00 54.42 C
ATOM 16 N7 A A 352 -45.989 40.461 91.474 1.00 54.12 N
ATOM 17 C5 A A 352 -44.727 40.855 91.855 1.00 53.87 C
ATOM 18 C6 A A 352 -43.547 40.176 91.888 1.00 53.55 C
ATOM 19 N6 A A 352 -43.459 38.919 91.535 1.00 53.41 N
ATOM 20 N1 A A 352 -42.463 40.819 92.305 1.00 53.41 N
ATOM 21 C2 A A 352 -42.565 42.092 92.688 1.00 53.59 C
ATOM 22 N3 A A 352 -43.646 42.844 92.701 1.00 53.91 N
ATOM 23 C4 A A 352 -44.688 42.144 92.267 1.00 54.03 C
ATOM 24 P C A 353 -46.023 46.753 88.529 1.00 61.53 P
ATOM 25 OP1 C A 353 -45.717 48.197 88.362 1.00 61.65 O
ATOM 26 OP2 C A 353 -46.988 46.095 87.600 1.00 61.63 O
ATOM 27 O5' C A 353 -44.671 45.933 88.560 1.00 61.06 O
TER

ATOM 1 O3' C B 313 -40.538 33.490 88.940 1.00 50.92 O
ATOM 2 P A B 314 -40.898 32.868 90.369 1.00 56.75 P
ATOM 3 OP1 A B 314 -39.675 32.264 90.898 1.00 56.61 O
ATOM 4 OP2 A B 314 -42.083 32.007 90.186 1.00 56.99 O
ATOM 5 O5' A B 314 -41.305 34.148 91.238 1.00 56.93 O
ATOM 6 C5' A B 314 -40.501 35.318 91.262 1.00 56.78 C
ATOM 7 C4' A B 314 -40.466 35.938 92.635 1.00 56.99 C
ATOM 8 O4' A B 314 -41.642 36.771 92.823 1.00 57.26 O
ATOM 9 C3' A B 314 -40.460 34.955 93.808 1.00 57.19 C
ATOM 10 O3' A B 314 -39.678 35.510 94.874 1.00 57.25 O
ATOM 11 C2' A B 314 -41.929 34.943 94.216 1.00 57.55 C
ATOM 12 O2' A B 314 -42.179 34.512 95.532 1.00 57.86 O
ATOM 13 C1' A B 314 -42.277 36.406 94.029 1.00 57.60 C
ATOM 14 N9 A B 314 -43.703 36.671 93.902 1.00 57.89 N
ATOM 15 C8 A B 314 -44.637 35.831 93.366 1.00 58.00 C
ATOM 16 N7 A B 314 -45.853 36.316 93.371 1.00 58.32 N
ATOM 17 C5 A B 314 -45.690 37.554 93.974 1.00 58.41 C
ATOM 18 C6 A B 314 -46.599 38.553 94.280 1.00 58.74 C
ATOM 19 N6 A B 314 -47.879 38.414 93.991 1.00 59.04 N
ATOM 20 N1 A B 314 -46.158 39.669 94.880 1.00 58.79 N
ATOM 21 C2 A B 314 -44.868 39.778 95.147 1.00 58.52 C
ATOM 22 N3 A B 314 -43.909 38.889 94.899 1.00 58.20 N
ATOM 23 C4 A B 314 -44.381 37.789 94.307 1.00 58.16 C
ATOM 24 P A B 315 -38.131 35.071 95.080 1.00 55.90 P
ATOM 25 OP1 A B 315 -37.528 34.818 93.722 1.00 55.54 O
ATOM 26 OP2 A B 315 -38.149 33.955 96.084 1.00 56.12 O
ATOM 27 O5' A B 315 -37.452 36.369 95.709 1.00 55.93 O
TER

Atoms:
OP1: (-50.944,42.753,88.819)
OP2: (-48.974,41.204,88.323)
C3': (-46.690,45.282,90.554)
C1': (-46.466,43.931,92.481)
C5': (-49.080,44.554,90.182)
O4': (-47.828,44.000,92.155)
C8: (-46.713,41.524,91.673)
O2': (-45.644,46.169,92.537)
C6: (-43.547,40.176,91.888)
C5: (-44.727,40.855,91.855)
C4: (-44.688,42.144,92.267)
P: (-49.624,42.221,89.201)
C4': (-48.047,45.022,91.153)
C2': (-45.735,45.032,91.707)
C2: (-42.565,42.092,92.688)
N1: (-42.463,40.819,92.305)
N3: (-43.646,42.844,92.701)
N6: (-43.459,38.919,91.535)
N7: (-45.989,40.461,91.474)
N9: (-45.973,42.581,92.138)
O5': (-48.637,43.421,89.456)
O3': (-46.592,46.565,90.007)
OP1: (-39.675,32.264,90.898)
OP2: (-42.083,32.007,90.186)
C3': (-40.460,34.955,93.808)
C1': (-42.277,36.406,94.029)
C5': (-40.501,35.318,91.262)
O4': (-41.642,36.771,92.823)
C8: (-44.637,35.831,93.366)
O2': (-42.179,34.512,95.532)
C6: (-46.599,38.553,94.280)
C5: (-45.690,37.554,93.974)
C4: (-44.381,37.789,94.307)
P: (-40.898,32.868,90.369)
C4': (-40.466,35.938,92.635)
C2': (-41.929,34.943,94.216)
C2: (-44.868,39.778,95.147)
N1: (-46.158,39.669,94.880)
N3: (-43.909,38.889,94.899)
N6: (-47.879,38.414,93.991)
N7: (-45.853,36.316,93.371)
N9: (-43.703,36.671,93.902)
O5': (-41.305,34.148,91.238)
O3': (-39.678,35.510,94.874)
Image (generated by PyMOL):
PyMOL image
show in jmol