Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQO:0244:0241
Extra
PDB:
ATOM 1 O3' A A 243 83.181 141.811 -9.500 1.00 84.31 O
ATOM 2 P C A 244 84.563 140.999 -9.355 1.00 84.22 P
ATOM 3 OP1 C A 244 84.820 140.315 -10.650 1.00 83.82 O
ATOM 4 OP2 C A 244 84.514 140.199 -8.100 1.00 84.75 O
ATOM 5 O5' C A 244 85.662 142.136 -9.160 1.00 83.57 O
ATOM 6 C5' C A 244 86.056 142.989 -10.249 1.00 81.16 C
ATOM 7 C4' C A 244 87.003 144.055 -9.755 1.00 80.52 C
ATOM 8 O4' C A 244 86.331 144.850 -8.742 1.00 81.13 O
ATOM 9 C3' C A 244 88.255 143.557 -9.049 1.00 80.49 C
ATOM 10 O3' C A 244 89.283 143.186 -9.958 1.00 79.17 O
ATOM 11 C2' C A 244 88.644 144.764 -8.208 1.00 80.91 C
ATOM 12 O2' C A 244 89.281 145.775 -8.962 1.00 80.38 O
ATOM 13 C1' C A 244 87.270 145.264 -7.760 1.00 81.63 C
ATOM 14 N1 C A 244 86.855 144.729 -6.446 1.00 82.50 N
ATOM 15 C2 C A 244 87.343 145.344 -5.278 1.00 83.18 C
ATOM 16 O2 C A 244 88.121 146.309 -5.378 1.00 83.21 O
ATOM 17 N3 C A 244 86.956 144.869 -4.072 1.00 83.96 N
ATOM 18 C4 C A 244 86.124 143.827 -4.000 1.00 83.90 C
ATOM 19 N4 C A 244 85.760 143.403 -2.787 1.00 83.31 N
ATOM 20 C5 C A 244 85.623 143.178 -5.168 1.00 83.46 C
ATOM 21 C6 C A 244 86.010 143.657 -6.356 1.00 82.69 C
ATOM 22 P G A 245 89.993 141.749 -9.816 1.00 79.65 P
ATOM 23 OP1 G A 245 91.167 141.741 -10.723 1.00 80.95 O
ATOM 24 OP2 G A 245 88.948 140.699 -9.956 1.00 79.79 O
ATOM 25 O5' G A 245 90.536 141.713 -8.317 1.00 80.05 O
TER
ATOM 1 O3' C B 240 80.519 139.173 3.806 1.00 61.55 O
ATOM 2 P U B 241 79.359 139.754 2.861 1.00 64.31 P
ATOM 3 OP1 U B 241 78.513 140.658 3.685 1.00 63.29 O
ATOM 4 OP2 U B 241 78.726 138.619 2.137 1.00 61.62 O
ATOM 5 O5' U B 241 80.153 140.646 1.807 1.00 65.49 O
ATOM 6 C5' U B 241 80.721 141.908 2.196 1.00 68.89 C
ATOM 7 C4' U B 241 81.335 142.603 1.004 1.00 72.48 C
ATOM 8 O4' U B 241 82.477 141.841 0.526 1.00 72.26 O
ATOM 9 C3' U B 241 80.463 142.739 -0.235 1.00 74.86 C
ATOM 10 O3' U B 241 79.500 143.785 -0.138 1.00 77.82 O
ATOM 11 C2' U B 241 81.504 142.986 -1.318 1.00 74.77 C
ATOM 12 O2' U B 241 82.003 144.312 -1.308 1.00 74.49 O
ATOM 13 C1' U B 241 82.613 142.025 -0.878 1.00 73.84 C
ATOM 14 N1 U B 241 82.520 140.716 -1.546 1.00 72.09 N
ATOM 15 C2 U B 241 83.235 140.543 -2.719 1.00 72.34 C
ATOM 16 O2 U B 241 83.940 141.416 -3.204 1.00 72.48 O
ATOM 17 N3 U B 241 83.095 139.308 -3.306 1.00 71.59 N
ATOM 18 C4 U B 241 82.326 138.256 -2.855 1.00 69.58 C
ATOM 19 O4 U B 241 82.290 137.211 -3.504 1.00 66.96 O
ATOM 20 C5 U B 241 81.628 138.510 -1.636 1.00 70.06 C
ATOM 21 C6 U B 241 81.745 139.698 -1.038 1.00 71.67 C
ATOM 22 P C B 242 77.985 143.506 -0.605 1.00 79.89 P
ATOM 23 OP1 C B 242 77.252 144.796 -0.654 1.00 79.83 O
ATOM 24 OP2 C B 242 77.457 142.394 0.232 1.00 79.96 O
ATOM 25 O5' C B 242 78.142 142.964 -2.094 1.00 80.54 O
TER
ATOM 2 P C A 244 84.563 140.999 -9.355 1.00 84.22 P
ATOM 3 OP1 C A 244 84.820 140.315 -10.650 1.00 83.82 O
ATOM 4 OP2 C A 244 84.514 140.199 -8.100 1.00 84.75 O
ATOM 5 O5' C A 244 85.662 142.136 -9.160 1.00 83.57 O
ATOM 6 C5' C A 244 86.056 142.989 -10.249 1.00 81.16 C
ATOM 7 C4' C A 244 87.003 144.055 -9.755 1.00 80.52 C
ATOM 8 O4' C A 244 86.331 144.850 -8.742 1.00 81.13 O
ATOM 9 C3' C A 244 88.255 143.557 -9.049 1.00 80.49 C
ATOM 10 O3' C A 244 89.283 143.186 -9.958 1.00 79.17 O
ATOM 11 C2' C A 244 88.644 144.764 -8.208 1.00 80.91 C
ATOM 12 O2' C A 244 89.281 145.775 -8.962 1.00 80.38 O
ATOM 13 C1' C A 244 87.270 145.264 -7.760 1.00 81.63 C
ATOM 14 N1 C A 244 86.855 144.729 -6.446 1.00 82.50 N
ATOM 15 C2 C A 244 87.343 145.344 -5.278 1.00 83.18 C
ATOM 16 O2 C A 244 88.121 146.309 -5.378 1.00 83.21 O
ATOM 17 N3 C A 244 86.956 144.869 -4.072 1.00 83.96 N
ATOM 18 C4 C A 244 86.124 143.827 -4.000 1.00 83.90 C
ATOM 19 N4 C A 244 85.760 143.403 -2.787 1.00 83.31 N
ATOM 20 C5 C A 244 85.623 143.178 -5.168 1.00 83.46 C
ATOM 21 C6 C A 244 86.010 143.657 -6.356 1.00 82.69 C
ATOM 22 P G A 245 89.993 141.749 -9.816 1.00 79.65 P
ATOM 23 OP1 G A 245 91.167 141.741 -10.723 1.00 80.95 O
ATOM 24 OP2 G A 245 88.948 140.699 -9.956 1.00 79.79 O
ATOM 25 O5' G A 245 90.536 141.713 -8.317 1.00 80.05 O
TER
ATOM 1 O3' C B 240 80.519 139.173 3.806 1.00 61.55 O
ATOM 2 P U B 241 79.359 139.754 2.861 1.00 64.31 P
ATOM 3 OP1 U B 241 78.513 140.658 3.685 1.00 63.29 O
ATOM 4 OP2 U B 241 78.726 138.619 2.137 1.00 61.62 O
ATOM 5 O5' U B 241 80.153 140.646 1.807 1.00 65.49 O
ATOM 6 C5' U B 241 80.721 141.908 2.196 1.00 68.89 C
ATOM 7 C4' U B 241 81.335 142.603 1.004 1.00 72.48 C
ATOM 8 O4' U B 241 82.477 141.841 0.526 1.00 72.26 O
ATOM 9 C3' U B 241 80.463 142.739 -0.235 1.00 74.86 C
ATOM 10 O3' U B 241 79.500 143.785 -0.138 1.00 77.82 O
ATOM 11 C2' U B 241 81.504 142.986 -1.318 1.00 74.77 C
ATOM 12 O2' U B 241 82.003 144.312 -1.308 1.00 74.49 O
ATOM 13 C1' U B 241 82.613 142.025 -0.878 1.00 73.84 C
ATOM 14 N1 U B 241 82.520 140.716 -1.546 1.00 72.09 N
ATOM 15 C2 U B 241 83.235 140.543 -2.719 1.00 72.34 C
ATOM 16 O2 U B 241 83.940 141.416 -3.204 1.00 72.48 O
ATOM 17 N3 U B 241 83.095 139.308 -3.306 1.00 71.59 N
ATOM 18 C4 U B 241 82.326 138.256 -2.855 1.00 69.58 C
ATOM 19 O4 U B 241 82.290 137.211 -3.504 1.00 66.96 O
ATOM 20 C5 U B 241 81.628 138.510 -1.636 1.00 70.06 C
ATOM 21 C6 U B 241 81.745 139.698 -1.038 1.00 71.67 C
ATOM 22 P C B 242 77.985 143.506 -0.605 1.00 79.89 P
ATOM 23 OP1 C B 242 77.252 144.796 -0.654 1.00 79.83 O
ATOM 24 OP2 C B 242 77.457 142.394 0.232 1.00 79.96 O
ATOM 25 O5' C B 242 78.142 142.964 -2.094 1.00 80.54 O
TER
Atoms:
C2: (87.343,145.344,-5.278)
OP1: (84.820,140.315,-10.650)
OP2: (84.514,140.199,-8.100)
C4: (86.124,143.827,-4.000)
O5': (85.662,142.136,-9.160)
C3': (88.255,143.557,-9.049)
C1': (87.270,145.264,-7.760)
O4': (86.331,144.850,-8.742)
C5': (86.056,142.989,-10.249)
P: (84.563,140.999,-9.355)
O2: (88.121,146.309,-5.378)
C4': (87.003,144.055,-9.755)
C2': (88.644,144.764,-8.208)
O2': (89.281,145.775,-8.962)
N1: (86.855,144.729,-6.446)
N3: (86.956,144.869,-4.072)
N4: (85.760,143.403,-2.787)
C6: (86.010,143.657,-6.356)
C5: (85.623,143.178,-5.168)
O3': (89.283,143.186,-9.958)
OP1: (84.820,140.315,-10.650)
OP2: (84.514,140.199,-8.100)
C4: (86.124,143.827,-4.000)
O5': (85.662,142.136,-9.160)
C3': (88.255,143.557,-9.049)
C1': (87.270,145.264,-7.760)
O4': (86.331,144.850,-8.742)
C5': (86.056,142.989,-10.249)
P: (84.563,140.999,-9.355)
O2: (88.121,146.309,-5.378)
C4': (87.003,144.055,-9.755)
C2': (88.644,144.764,-8.208)
O2': (89.281,145.775,-8.962)
N1: (86.855,144.729,-6.446)
N3: (86.956,144.869,-4.072)
N4: (85.760,143.403,-2.787)
C6: (86.010,143.657,-6.356)
C5: (85.623,143.178,-5.168)
O3': (89.283,143.186,-9.958)
C4: (82.326,138.256,-2.855)
N3: (83.095,139.308,-3.306)
OP1: (78.513,140.658,3.685)
OP2: (78.726,138.619,2.137)
C2: (83.235,140.543,-2.719)
C1': (82.613,142.025,-0.878)
C3': (80.463,142.739,-0.235)
O5': (80.153,140.646,1.807)
O4': (82.477,141.841,0.526)
C5': (80.721,141.908,2.196)
P: (79.359,139.754,2.861)
C4': (81.335,142.603,1.004)
C2': (81.504,142.986,-1.318)
O2': (82.003,144.312,-1.308)
N1: (82.520,140.716,-1.546)
O4: (82.290,137.211,-3.504)
O2: (83.940,141.416,-3.204)
C6: (81.745,139.698,-1.038)
C5: (81.628,138.510,-1.636)
O3': (79.500,143.785,-0.138)
N3: (83.095,139.308,-3.306)
OP1: (78.513,140.658,3.685)
OP2: (78.726,138.619,2.137)
C2: (83.235,140.543,-2.719)
C1': (82.613,142.025,-0.878)
C3': (80.463,142.739,-0.235)
O5': (80.153,140.646,1.807)
O4': (82.477,141.841,0.526)
C5': (80.721,141.908,2.196)
P: (79.359,139.754,2.861)
C4': (81.335,142.603,1.004)
C2': (81.504,142.986,-1.318)
O2': (82.003,144.312,-1.308)
N1: (82.520,140.716,-1.546)
O4: (82.290,137.211,-3.504)
O2: (83.940,141.416,-3.204)
C6: (81.745,139.698,-1.038)
C5: (81.628,138.510,-1.636)
O3': (79.500,143.785,-0.138)
Image (generated by PyMOL):